RNA–Protein interactions for RNA: ENST00000417997.1

HMGB3P20-201, Transcript of high mobility group box 3 pseudogene 20, humanhuman

BASIC

Gene HMGB3P20, Length 600 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P20-201ENST00000417997 FCER1AP12319 257 aa4.42□□□□□ -1.7
HMGB3P20-201ENST00000417997 TYRP1P17643 537 aa4.42□□□□□ -1.7
HMGB3P20-201ENST00000417997 C5AR1P21730 350 aa4.42□□□□□ -1.7
HMGB3P20-201ENST00000417997 FGFR2P21802 821 aa4.42□□□□□ -1.7
HMGB3P20-201ENST00000417997 HSPA4P34932 840 aa4.42□□□□□ -1.7
HMGB3P20-201ENST00000417997 MCM2P49736 904 aa4.42□□□□□ -1.7
HMGB3P20-201ENST00000417997 GUCY2FP51841 1108 aa4.42□□□□□ -1.7
HMGB3P20-201ENST00000417997 CTXN1P60606 82 aa4.42□□□□□ -1.7
HMGB3P20-201ENST00000417997 RPS8P62241 208 aaKnown RBP4.42□□□□□ -1.7
HMGB3P20-201ENST00000417997 MRPS35P82673 323 aaKnown RBP4.42□□□□□ -1.7
HMGB3P20-201ENST00000417997 MRPS21P82921 87 aaKnown RBP4.42□□□□□ -1.7
HMGB3P20-201ENST00000417997 KIF23Q02241 960 aaPredicted RBP4.42□□□□□ -1.7
HMGB3P20-201ENST00000417997 DDR1Q08345 913 aa4.42□□□□□ -1.7
HMGB3P20-201ENST00000417997 SCAPQ12770 1279 aa4.42□□□□□ -1.7
HMGB3P20-201ENST00000417997 TARDBPQ13148 414 aaKnown RBP eCLIP4.42□□□□□ -1.7
HMGB3P20-201ENST00000417997 EZH2Q15910 746 aaKnown RBP4.42□□□□□ -1.7
HMGB3P20-201ENST00000417997 CYP2A13Q16696 494 aa4.42□□□□□ -1.7
HMGB3P20-201ENST00000417997 MCMDC2Q4G0Z9 681 aa4.42□□□□□ -1.7
HMGB3P20-201ENST00000417997 PRR16Q569H4 304 aa4.42□□□□□ -1.7
HMGB3P20-201ENST00000417997 SYDE2Q5VT97 1194 aa4.42□□□□□ -1.7
HMGB3P20-201ENST00000417997 FBXO42Q6P3S6 717 aa4.42□□□□□ -1.7
HMGB3P20-201ENST00000417997 GADL1Q6ZQY3 521 aa4.42□□□□□ -1.7
HMGB3P20-201ENST00000417997 CCDC129Q6ZRS4 1044 aa4.42□□□□□ -1.7
HMGB3P20-201ENST00000417997 NOL8Q76FK4 1167 aaKnown RBP4.42□□□□□ -1.7
HMGB3P20-201ENST00000417997 PNMA8AQ86V59 439 aaPredicted RBP4.42□□□□□ -1.7
HMGB3P20-201ENST00000417997 TICAM2Q86XR7 235 aa4.42□□□□□ -1.7
HMGB3P20-201ENST00000417997 COL23A1Q86Y22 540 aaPredicted RBP4.42□□□□□ -1.7
HMGB3P20-201ENST00000417997 NLGN4YQ8NFZ3 816 aaPredicted RBP4.42□□□□□ -1.7
HMGB3P20-201ENST00000417997 CAGE1Q8TC20 777 aa4.42□□□□□ -1.7
HMGB3P20-201ENST00000417997 FAXDC2Q96IV6 333 aa4.42□□□□□ -1.7
HMGB3P20-201ENST00000417997 DUSP26Q9BV47 211 aa4.42□□□□□ -1.7
HMGB3P20-201ENST00000417997 PACSIN1Q9BY11 444 aa4.42□□□□□ -1.7
HMGB3P20-201ENST00000417997 KRTAP17-1Q9BYP8 105 aa4.42□□□□□ -1.7
HMGB3P20-201ENST00000417997 LSG1Q9H089 658 aaKnown RBP4.42□□□□□ -1.7
HMGB3P20-201ENST00000417997 TMX4Q9H1E5 349 aaPredicted RBP4.42□□□□□ -1.7
HMGB3P20-201ENST00000417997 IL25Q9H293 177 aa4.42□□□□□ -1.7
HMGB3P20-201ENST00000417997 FAM30AQ9NZY2 134 aa4.42□□□□□ -1.7
HMGB3P20-201ENST00000417997 HMG20BQ9P0W2 317 aa4.42□□□□□ -1.7
HMGB3P20-201ENST00000417997 HSFX1Q9UBD0 423 aa4.42□□□□□ -1.7
HMGB3P20-201ENST00000417997 RGS17Q9UGC6 210 aaPredicted RBP4.42□□□□□ -1.7
HMGB3P20-201ENST00000417997 TRHDEQ9UKU6 1024 aa4.42□□□□□ -1.7
HMGB3P20-201ENST00000417997 MRFAP1Q9Y605 127 aa4.42□□□□□ -1.7
HMGB3P20-201ENST00000417997 MYH8P13535 1937 aa4.42□□□□□ -1.7
HMGB3P20-201ENST00000417997 KIF13BQ9NQT8 1826 aa4.42□□□□□ -1.7
HMGB3P20-201ENST00000417997 CDK5RAP2Q96SN8 1893 aa4.41□□□□□ -1.7
HMGB3P20-201ENST00000417997 MYH2Q9UKX2 1941 aa4.41□□□□□ -1.7
HMGB3P20-201ENST00000417997 UFL1O94874 794 aa4.41□□□□□ -1.7
HMGB3P20-201ENST00000417997 AGFG2O95081 481 aa4.41□□□□□ -1.7
HMGB3P20-201ENST00000417997 MMP10P09238 476 aa4.41□□□□□ -1.7
HMGB3P20-201ENST00000417997 MTHFD1P11586 935 aaKnown RBP4.41□□□□□ -1.7
HMGB3P20-201ENST00000417997 CASTP20810 708 aaKnown RBP4.41□□□□□ -1.7
HMGB3P20-201ENST00000417997 PSMA5P28066 241 aa4.41□□□□□ -1.7
HMGB3P20-201ENST00000417997 TM4SF1P30408 202 aa4.41□□□□□ -1.7
HMGB3P20-201ENST00000417997 GYG1P46976 350 aa4.41□□□□□ -1.7
HMGB3P20-201ENST00000417997 VAV2P52735 878 aa4.41□□□□□ -1.7
HMGB3P20-201ENST00000417997 IL10RAQ13651 578 aa4.41□□□□□ -1.7
HMGB3P20-201ENST00000417997 KRT32Q14532 448 aa4.41□□□□□ -1.7
HMGB3P20-201ENST00000417997 SLC15A2Q16348 729 aa4.41□□□□□ -1.7
HMGB3P20-201ENST00000417997 UAP1L1Q3KQV9 507 aa4.41□□□□□ -1.7
HMGB3P20-201ENST00000417997 UTP14CQ5TAP6 766 aaKnown RBP4.41□□□□□ -1.7
HMGB3P20-201ENST00000417997 BLOC1S2Q6QNY1 142 aa4.41□□□□□ -1.7
HMGB3P20-201ENST00000417997 ZNF804AQ7Z570 1209 aa4.41□□□□□ -1.7
HMGB3P20-201ENST00000417997 ZNF589Q86UQ0 364 aaPredicted RBP4.41□□□□□ -1.7
HMGB3P20-201ENST00000417997 CBARPQ8N350 705 aaPredicted RBP4.41□□□□□ -1.7
HMGB3P20-201ENST00000417997 DCBLD1Q8N8Z6 715 aa4.41□□□□□ -1.7
HMGB3P20-201ENST00000417997 BOLLQ8N9W6 283 aaKnown RBP4.41□□□□□ -1.7
HMGB3P20-201ENST00000417997 SPATA5Q8NB90 893 aa4.41□□□□□ -1.7
HMGB3P20-201ENST00000417997 SIMC1Q8NDZ2 872 aa4.41□□□□□ -1.7
HMGB3P20-201ENST00000417997 ACTRT2Q8TDY3 377 aa4.41□□□□□ -1.7
HMGB3P20-201ENST00000417997 SLC9A6Q92581 669 aa4.41□□□□□ -1.7
HMGB3P20-201ENST00000417997 KAT5Q92993 513 aa4.41□□□□□ -1.7
HMGB3P20-201ENST00000417997 TMEM125Q96AQ2 219 aa4.41□□□□□ -1.7
HMGB3P20-201ENST00000417997 ZNF764Q96H86 408 aaPredicted RBP4.41□□□□□ -1.7
HMGB3P20-201ENST00000417997 JAKMIP1Q96N16 626 aaKnown RBP4.41□□□□□ -1.7
HMGB3P20-201ENST00000417997 BBC3Q96PG8 261 aaPredicted RBP4.41□□□□□ -1.7
HMGB3P20-201ENST00000417997 MED15Q96RN5 788 aa4.41□□□□□ -1.7
HMGB3P20-201ENST00000417997 SEC62Q99442 399 aaKnown RBP4.41□□□□□ -1.7
HMGB3P20-201ENST00000417997 UPF3BQ9BZI7 483 aaKnown RBP4.41□□□□□ -1.7
HMGB3P20-201ENST00000417997 R3HDMLQ9H3Y0 253 aa4.41□□□□□ -1.7
HMGB3P20-201ENST00000417997 UNKLQ9H9P5 680 aaKnown RBP4.41□□□□□ -1.7
HMGB3P20-201ENST00000417997 PIH1D3Q9NQM4 214 aaKnown RBP4.41□□□□□ -1.7
HMGB3P20-201ENST00000417997 TMEM74BQ9NUR3 256 aa4.41□□□□□ -1.7
HMGB3P20-201ENST00000417997 SNX14Q9Y5W7 946 aa4.41□□□□□ -1.7
HMGB3P20-201ENST00000417997 CYP46A1Q9Y6A2 500 aa4.41□□□□□ -1.7
HMGB3P20-201ENST00000417997 COL1A1P02452 1464 aaPredicted RBP4.41□□□□□ -1.7
HMGB3P20-201ENST00000417997 FOCADQ5VW36 1801 aa4.41□□□□□ -1.7
HMGB3P20-201ENST00000417997 ECM29Q5VYK3 1845 aa4.41□□□□□ -1.7
HMGB3P20-201ENST00000417997 ZNF804BA4D1E1 1349 aa4.41□□□□□ -1.7
HMGB3P20-201ENST00000417997 ZNF532Q9HCE3 1301 aa4.41□□□□□ -1.7
HMGB3P20-201ENST00000417997 RPAP1Q9BWH6 1393 aaPredicted RBP4.4□□□□□ -1.7
HMGB3P20-201ENST00000417997 BAZ2AQ9UIF9 1905 aaKnown RBP4.4□□□□□ -1.7
HMGB3P20-201ENST00000417997 MYH15Q9Y2K3 1946 aa4.4□□□□□ -1.7
HMGB3P20-201ENST00000417997 PSME4Q14997 1843 aa4.4□□□□□ -1.7
HMGB3P20-201ENST00000417997 CCDC154A6NI56 674 aa4.4□□□□□ -1.71
HMGB3P20-201ENST00000417997 SNAP23O00161 211 aa4.4□□□□□ -1.71
HMGB3P20-201ENST00000417997 GPAA1O43292 621 aa4.4□□□□□ -1.71
HMGB3P20-201ENST00000417997 PEX1O43933 1283 aa4.4□□□□□ -1.71
HMGB3P20-201ENST00000417997 KATNA1O75449 491 aa4.4□□□□□ -1.71
HMGB3P20-201ENST00000417997 CD1AP06126 327 aa4.4□□□□□ -1.71
HMGB3P20-201ENST00000417997 SBK3P0C264 359 aa4.4□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms