RNA–Protein interactions for RNA: ENST00000416123.6

COL12A1-203, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 5 BASIC

Gene COL12A1, Length 8,964 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-203ENST00000416123 EPS8L3Q8TE67 593 aaKnown RBP10.99□□□□□ -0.65
COL12A1-203ENST00000416123 CASKIN2Q8WXE0 1202 aa10.99□□□□□ -0.65
COL12A1-203ENST00000416123 CDKN2AIPQ9NXV6 580 aaPredicted RBP10.99□□□□□ -0.65
COL12A1-203ENST00000416123 NSMCE4AQ9NXX6 385 aa10.99□□□□□ -0.65
COL12A1-203ENST00000416123 TRPM5Q9NZQ8 1165 aa10.99□□□□□ -0.65
COL12A1-203ENST00000416123 DTNAQ9Y4J8 743 aa10.99□□□□□ -0.65
COL12A1-203ENST00000416123 MANSC4A6NHS7 340 aaPredicted RBP10.99□□□□□ -0.65
COL12A1-203ENST00000416123 GARTP22102 1010 aa10.99□□□□□ -0.65
COL12A1-203ENST00000416123 OXCT1P55809 520 aa10.99□□□□□ -0.65
COL12A1-203ENST00000416123 DDR1Q08345 913 aa10.99□□□□□ -0.65
COL12A1-203ENST00000416123 DACT2Q5SW24 774 aa10.99□□□□□ -0.65
COL12A1-203ENST00000416123 NT5DC3Q86UY8 548 aa10.99□□□□□ -0.65
COL12A1-203ENST00000416123 REPS2Q8NFH8 660 aa10.99□□□□□ -0.65
COL12A1-203ENST00000416123 ENGASEQ8NFI3 743 aa10.99□□□□□ -0.65
COL12A1-203ENST00000416123 MED8Q96G25 268 aa10.99□□□□□ -0.65
COL12A1-203ENST00000416123 ARL2BPQ9Y2Y0 163 aa10.99□□□□□ -0.65
COL12A1-203ENST00000416123 OVGP1Q12889 678 aa10.99□□□□□ -0.65
COL12A1-203ENST00000416123 OVOS1Q6IE37 1185 aa10.99□□□□□ -0.65
COL12A1-203ENST00000416123 UGT3A1Q6NUS8 523 aa10.99□□□□□ -0.65
COL12A1-203ENST00000416123 SLC13A5Q86YT5 568 aaPredicted RBP10.99□□□□□ -0.65
COL12A1-203ENST00000416123 C4orf19Q8IY42 314 aa10.99□□□□□ -0.65
COL12A1-203ENST00000416123 KIAA0895Q8NCT3 520 aa10.99□□□□□ -0.65
COL12A1-203ENST00000416123 FICDQ9BVA6 458 aa10.99□□□□□ -0.65
COL12A1-203ENST00000416123 FMN2Q9NZ56 1722 aa10.99□□□□□ -0.65
COL12A1-203ENST00000416123 MAP3K13O43283 966 aa10.99□□□□□ -0.65
COL12A1-203ENST00000416123 EGFRP00533 1210 aa10.99□□□□□ -0.65
COL12A1-203ENST00000416123 RAP1GDS1P52306 607 aa10.99□□□□□ -0.65
COL12A1-203ENST00000416123 OTOP1Q7RTM1 612 aa10.99□□□□□ -0.65
COL12A1-203ENST00000416123 FAM111AQ96PZ2 611 aa10.99□□□□□ -0.65
COL12A1-203ENST00000416123 RNF208Q9H0X6 261 aa10.99□□□□□ -0.65
COL12A1-203ENST00000416123 CACNA2D2Q9NY47 1150 aa10.99□□□□□ -0.65
COL12A1-203ENST00000416123 CALCAP01258 141 aa10.99□□□□□ -0.65
COL12A1-203ENST00000416123 SLURP2P0DP57 97 aa10.99□□□□□ -0.65
COL12A1-203ENST00000416123 PLCL1Q15111 1095 aa10.99□□□□□ -0.65
COL12A1-203ENST00000416123 FAM83EQ2M2I3 478 aa10.99□□□□□ -0.65
COL12A1-203ENST00000416123 PTAR1Q7Z6K3 402 aaPredicted RBP10.99□□□□□ -0.65
COL12A1-203ENST00000416123 TSPAN16Q9UKR8 245 aa10.99□□□□□ -0.65
COL12A1-203ENST00000416123 GRID1Q9ULK0 1009 aa10.99□□□□□ -0.65
COL12A1-203ENST00000416123 WDR3Q9UNX4 943 aaKnown RBP eCLIP10.99□□□□□ -0.65
COL12A1-203ENST00000416123 MYH2Q9UKX2 1941 aa10.99□□□□□ -0.65
COL12A1-203ENST00000416123 LOC100653049A0A140TA62 436 aa10.99□□□□□ -0.65
COL12A1-203ENST00000416123 TRIM49D1C9J1S8 452 aa10.99□□□□□ -0.65
COL12A1-203ENST00000416123 KRT34O76011 436 aa10.99□□□□□ -0.65
COL12A1-203ENST00000416123 USP17L7P0C7H9 530 aa10.99□□□□□ -0.65
COL12A1-203ENST00000416123 SERPINB5P36952 375 aa10.99□□□□□ -0.65
COL12A1-203ENST00000416123 FDFT1P37268 417 aa10.99□□□□□ -0.65
COL12A1-203ENST00000416123 SCNN1BP51168 640 aa10.99□□□□□ -0.65
COL12A1-203ENST00000416123 CDC16Q13042 620 aa10.99□□□□□ -0.65
COL12A1-203ENST00000416123 INPP5AQ14642 412 aa10.99□□□□□ -0.65
COL12A1-203ENST00000416123 RD3Q7Z3Z2 195 aa10.99□□□□□ -0.65
COL12A1-203ENST00000416123 HORMAD1Q86X24 394 aa10.99□□□□□ -0.65
COL12A1-203ENST00000416123 KIF2BQ8N4N8 673 aa10.99□□□□□ -0.65
COL12A1-203ENST00000416123 ZNF555Q8NEP9 628 aa10.99□□□□□ -0.65
COL12A1-203ENST00000416123 SYN2Q92777 582 aaPredicted RBP10.99□□□□□ -0.65
COL12A1-203ENST00000416123 KIAA1683Q9H0B3 1180 aa10.99□□□□□ -0.65
COL12A1-203ENST00000416123 STOML1Q9UBI4 398 aa10.99□□□□□ -0.65
COL12A1-203ENST00000416123 RNASEH1O60930 286 aaKnown RBP10.99□□□□□ -0.65
COL12A1-203ENST00000416123 ALDH1A2O94788 518 aa10.99□□□□□ -0.65
COL12A1-203ENST00000416123 MAGEA9P43362 315 aa10.99□□□□□ -0.65
COL12A1-203ENST00000416123 PWP1Q13610 501 aa10.99□□□□□ -0.65
COL12A1-203ENST00000416123 BTG3Q14201 252 aaPredicted RBP10.99□□□□□ -0.65
COL12A1-203ENST00000416123 PGS1Q32NB8 556 aa10.99□□□□□ -0.65
COL12A1-203ENST00000416123 UNC45BQ8IWX7 931 aa10.99□□□□□ -0.65
COL12A1-203ENST00000416123 ATP8B4Q8TF62 1192 aa10.99□□□□□ -0.65
COL12A1-203ENST00000416123 DNAJC7Q99615 494 aa10.99□□□□□ -0.65
COL12A1-203ENST00000416123 ZSWIM1Q9BR11 485 aa10.99□□□□□ -0.65
COL12A1-203ENST00000416123 SCAMP3O14828 347 aaKnown RBP10.98□□□□□ -0.65
COL12A1-203ENST00000416123 GUCA1CO95843 209 aa10.98□□□□□ -0.65
COL12A1-203ENST00000416123 SP100P23497 879 aaPredicted RBP10.98□□□□□ -0.65
COL12A1-203ENST00000416123 CYP2F1P24903 491 aa10.98□□□□□ -0.65
COL12A1-203ENST00000416123 MAPK9P45984 424 aa10.98□□□□□ -0.65
COL12A1-203ENST00000416123 PSEN2P49810 448 aa10.98□□□□□ -0.65
COL12A1-203ENST00000416123 SLC12A3P55017 1021 aa10.98□□□□□ -0.65
COL12A1-203ENST00000416123 NCALDP61601 193 aa10.98□□□□□ -0.65
COL12A1-203ENST00000416123 UBE3AQ05086 875 aa10.98□□□□□ -0.65
COL12A1-203ENST00000416123 TTI2Q6NXR4 508 aa10.98□□□□□ -0.65
COL12A1-203ENST00000416123 TMCO5AQ8N6Q1 288 aa10.98□□□□□ -0.65
COL12A1-203ENST00000416123 FBXO36Q8NEA4 188 aa10.98□□□□□ -0.65
COL12A1-203ENST00000416123 PIF1Q9H611 641 aa10.98□□□□□ -0.65
COL12A1-203ENST00000416123 PKD2L2Q9NZM6 624 aa10.98□□□□□ -0.65
COL12A1-203ENST00000416123 NUDT5Q9UKK9 219 aa10.98□□□□□ -0.65
COL12A1-203ENST00000416123 FOXP2O15409 715 aa10.98□□□□□ -0.65
COL12A1-203ENST00000416123 SLITRK3O94933 977 aa10.98□□□□□ -0.65
COL12A1-203ENST00000416123 HSPA1AP0DMV8 641 aaKnown RBP10.98□□□□□ -0.65
COL12A1-203ENST00000416123 HSPA1BP0DMV9 641 aaKnown RBP10.98□□□□□ -0.65
COL12A1-203ENST00000416123 KPNA1P52294 538 aaPredicted RBP10.98□□□□□ -0.65
COL12A1-203ENST00000416123 DNAJC3Q13217 504 aa10.98□□□□□ -0.65
COL12A1-203ENST00000416123 COPS5Q92905 334 aa10.98□□□□□ -0.65
COL12A1-203ENST00000416123 CCT8L2Q96SF2 557 aa10.98□□□□□ -0.65
COL12A1-203ENST00000416123 ZNF556Q9HAH1 456 aa10.98□□□□□ -0.65
COL12A1-203ENST00000416123 AAR2Q9Y312 384 aaKnown RBP10.98□□□□□ -0.65
COL12A1-203ENST00000416123 PLD1Q13393 1074 aa10.98□□□□□ -0.65
COL12A1-203ENST00000416123 POU6F1Q14863 301 aa10.98□□□□□ -0.65
COL12A1-203ENST00000416123 TJAP1Q5JTD0 557 aa10.98□□□□□ -0.65
COL12A1-203ENST00000416123 ZNF571Q7Z3V5 609 aaPredicted RBP10.98□□□□□ -0.65
COL12A1-203ENST00000416123 ARHGEF19Q8IW93 802 aa10.98□□□□□ -0.65
COL12A1-203ENST00000416123 PHACTR4Q8IZ21 702 aa10.98□□□□□ -0.65
COL12A1-203ENST00000416123 HMX1Q9NP08 348 aaPredicted RBP10.98□□□□□ -0.65
COL12A1-203ENST00000416123 KBTBD4Q9NVX7 518 aa10.98□□□□□ -0.65
COL12A1-203ENST00000416123 C3P01024 1663 aa10.98□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms