RNA–Protein interactions for RNA: ENST00000413731.1

UPF3AP1-201, Transcript of UPF3A pseudogene 1, humanhuman

BASIC

Gene UPF3AP1, Length 1,126 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3AP1-201ENST00000413731 CASP5P51878 434 aa8.86□□□□□ -0.99
UPF3AP1-201ENST00000413731 LILRA4P59901 499 aa8.86□□□□□ -0.99
UPF3AP1-201ENST00000413731 PSMA6P60900 246 aaKnown RBP8.86□□□□□ -0.99
UPF3AP1-201ENST00000413731 CREB5Q02930 508 aa8.86□□□□□ -0.99
UPF3AP1-201ENST00000413731 ZNF252P-AS1Q0IIN9 211 aa8.86□□□□□ -0.99
UPF3AP1-201ENST00000413731 FOXC1Q12948 553 aa8.86□□□□□ -0.99
UPF3AP1-201ENST00000413731 CUL4BQ13620 913 aa8.86□□□□□ -0.99
UPF3AP1-201ENST00000413731 COL9A2Q14055 689 aaPredicted RBP8.86□□□□□ -0.99
UPF3AP1-201ENST00000413731 KYAT1Q16773 422 aa8.86□□□□□ -0.99
UPF3AP1-201ENST00000413731 L1TD1Q5T7N2 865 aaKnown RBP8.86□□□□□ -0.99
UPF3AP1-201ENST00000413731 SPATA1Q5VX52 437 aa8.86□□□□□ -0.99
UPF3AP1-201ENST00000413731 C9orf57Q5W0N0 161 aa8.86□□□□□ -0.99
UPF3AP1-201ENST00000413731 JADE1Q6IE81 842 aa8.86□□□□□ -0.99
UPF3AP1-201ENST00000413731 ARMCX5Q6P1M9 558 aa8.86□□□□□ -0.99
UPF3AP1-201ENST00000413731 UNC13DQ70J99 1090 aa8.86□□□□□ -0.99
UPF3AP1-201ENST00000413731 ZNF720Q7Z2F6 126 aa8.86□□□□□ -0.99
UPF3AP1-201ENST00000413731 NT5DC4Q86YG4 428 aa8.86□□□□□ -0.99
UPF3AP1-201ENST00000413731 CMTM8Q8IZV2 173 aa8.86□□□□□ -0.99
UPF3AP1-201ENST00000413731 MAB21L3Q8N8X9 362 aa8.86□□□□□ -0.99
UPF3AP1-201ENST00000413731 RPLP0P6Q8NHW5 317 aa8.86□□□□□ -0.99
UPF3AP1-201ENST00000413731 NOC3LQ8WTT2 800 aaKnown RBP8.86□□□□□ -0.99
UPF3AP1-201ENST00000413731 POMGNT1Q8WZA1 660 aa8.86□□□□□ -0.99
UPF3AP1-201ENST00000413731 EZH1Q92800 747 aaPredicted RBP8.86□□□□□ -0.99
UPF3AP1-201ENST00000413731 KCNN1Q92952 543 aa8.86□□□□□ -0.99
UPF3AP1-201ENST00000413731 HPS3Q969F9 1004 aa8.86□□□□□ -0.99
UPF3AP1-201ENST00000413731 CCDC47Q96A33 483 aaKnown RBP8.86□□□□□ -0.99
UPF3AP1-201ENST00000413731 PAGE5Q96GU1 130 aa8.86□□□□□ -0.99
UPF3AP1-201ENST00000413731 NIF3L1Q9GZT8 377 aa8.86□□□□□ -0.99
UPF3AP1-201ENST00000413731 RPF1Q9H9Y2 349 aaKnown RBP8.86□□□□□ -0.99
UPF3AP1-201ENST00000413731 FBRSL1Q9HCM7 1045 aaKnown RBP8.86□□□□□ -0.99
UPF3AP1-201ENST00000413731 RAB6BQ9NRW1 208 aa8.86□□□□□ -0.99
UPF3AP1-201ENST00000413731 THG1LQ9NWX6 298 aaKnown RBP8.86□□□□□ -0.99
UPF3AP1-201ENST00000413731 ABI2Q9NYB9 513 aaPredicted RBP8.86□□□□□ -0.99
UPF3AP1-201ENST00000413731 SCHIP1Q9P0W5 487 aaPredicted RBP8.86□□□□□ -0.99
UPF3AP1-201ENST00000413731 HSFX1Q9UBD0 423 aa8.86□□□□□ -0.99
UPF3AP1-201ENST00000413731 FASNP49327 2511 aaKnown RBP8.86□□□□□ -0.99
UPF3AP1-201ENST00000413731 UBE4BO95155 1302 aa8.85□□□□□ -0.99
UPF3AP1-201ENST00000413731 FAM237AA0A1B0GTK4 181 aa8.85□□□□□ -0.99
UPF3AP1-201ENST00000413731 C4orf47A7E2U8 309 aa8.85□□□□□ -0.99
UPF3AP1-201ENST00000413731 TISP43B9A030 160 aa8.85□□□□□ -0.99
UPF3AP1-201ENST00000413731 TNFRSF10BO14763 440 aa8.85□□□□□ -0.99
UPF3AP1-201ENST00000413731 OGTO15294 1046 aa8.85□□□□□ -0.99
UPF3AP1-201ENST00000413731 ATG13O75143 517 aa8.85□□□□□ -0.99
UPF3AP1-201ENST00000413731 PRPF6O94906 941 aaKnown RBP8.85□□□□□ -0.99
UPF3AP1-201ENST00000413731 TOP3BO95985 862 aaKnown RBP8.85□□□□□ -0.99
UPF3AP1-201ENST00000413731 CYP11A1P05108 521 aa8.85□□□□□ -0.99
UPF3AP1-201ENST00000413731 MYL1P05976 194 aa8.85□□□□□ -0.99
UPF3AP1-201ENST00000413731 HAPLN1P10915 354 aaPredicted RBP8.85□□□□□ -0.99
UPF3AP1-201ENST00000413731 BRD2P25440 801 aaKnown RBP8.85□□□□□ -0.99
UPF3AP1-201ENST00000413731 AVPR1AP37288 418 aa8.85□□□□□ -0.99
UPF3AP1-201ENST00000413731 WNT7BP56706 349 aa8.85□□□□□ -0.99
UPF3AP1-201ENST00000413731 NLRP12P59046 1061 aa8.85□□□□□ -0.99
UPF3AP1-201ENST00000413731 BFSP1Q12934 665 aa8.85□□□□□ -0.99
UPF3AP1-201ENST00000413731 TMEM132DQ14C87 1099 aa8.85□□□□□ -0.99
UPF3AP1-201ENST00000413731 ELF2Q15723 593 aa8.85□□□□□ -0.99
UPF3AP1-201ENST00000413731 SDHAF4Q5VUM1 108 aa8.85□□□□□ -0.99
UPF3AP1-201ENST00000413731 TXNDC8Q6A555 127 aa8.85□□□□□ -0.99
UPF3AP1-201ENST00000413731 SLFN12LQ6IEE8 588 aa8.85□□□□□ -0.99
UPF3AP1-201ENST00000413731 CNNM4Q6P4Q7 775 aa8.85□□□□□ -0.99
UPF3AP1-201ENST00000413731 SLC39A4Q6P5W5 647 aa8.85□□□□□ -0.99
UPF3AP1-201ENST00000413731 KRBA2Q6ZNG9 492 aa8.85□□□□□ -0.99
UPF3AP1-201ENST00000413731 LRRTM3Q86VH5 581 aa8.85□□□□□ -0.99
UPF3AP1-201ENST00000413731 ATCAYQ86WG3 371 aa8.85□□□□□ -0.99
UPF3AP1-201ENST00000413731 GLIS3Q8NEA6 775 aa8.85□□□□□ -0.99
UPF3AP1-201ENST00000413731 RNF34Q969K3 372 aa8.85□□□□□ -0.99
UPF3AP1-201ENST00000413731 IPO9Q96P70 1041 aaKnown RBP8.85□□□□□ -0.99
UPF3AP1-201ENST00000413731 P2RY13Q9BPV8 354 aa8.85□□□□□ -0.99
UPF3AP1-201ENST00000413731 FGFBP2Q9BYJ0 223 aa8.85□□□□□ -0.99
UPF3AP1-201ENST00000413731 CCSER2Q9H7U1 834 aa8.85□□□□□ -0.99
UPF3AP1-201ENST00000413731 TMEM206Q9H813 350 aa8.85□□□□□ -0.99
UPF3AP1-201ENST00000413731 KIF9Q9HAQ2 790 aa8.85□□□□□ -0.99
UPF3AP1-201ENST00000413731 WASF3Q9UPY6 502 aa8.85□□□□□ -0.99
UPF3AP1-201ENST00000413731 GTF3C5Q9Y5Q8 519 aaPredicted RBP8.85□□□□□ -0.99
UPF3AP1-201ENST00000413731 SPEGQ15772 3267 aa8.85□□□□□ -0.99
UPF3AP1-201ENST00000413731 ZZEF1O43149 2961 aa8.84□□□□□ -0.99
UPF3AP1-201ENST00000413731 A0A0B4J269 797 aa8.84□□□□□ -0.99
UPF3AP1-201ENST00000413731 PVALEFA0A1B0GWK0 134 aa8.84□□□□□ -0.99
UPF3AP1-201ENST00000413731 ANO9A1A5B4 782 aa8.84□□□□□ -0.99
UPF3AP1-201ENST00000413731 BCLAF3A2AJT9 711 aaKnown RBP8.84□□□□□ -0.99
UPF3AP1-201ENST00000413731 ANTXRLA6NF34 631 aa8.84□□□□□ -0.99
UPF3AP1-201ENST00000413731 PATE3B3GLJ2 98 aa8.84□□□□□ -0.99
UPF3AP1-201ENST00000413731 ANKRD63C9JTQ0 380 aa8.84□□□□□ -0.99
UPF3AP1-201ENST00000413731 PIRO00625 290 aa8.84□□□□□ -0.99
UPF3AP1-201ENST00000413731 EIF3DO15371 548 aaKnown RBP eCLIP8.84□□□□□ -0.99
UPF3AP1-201ENST00000413731 ZNF202O95125 648 aa8.84□□□□□ -0.99
UPF3AP1-201ENST00000413731 APBB3O95704 486 aa8.84□□□□□ -0.99
UPF3AP1-201ENST00000413731 CAVIN2O95810 425 aa8.84□□□□□ -0.99
UPF3AP1-201ENST00000413731 F11P03951 625 aa8.84□□□□□ -0.99
UPF3AP1-201ENST00000413731 RPN1P04843 607 aaKnown RBP8.84□□□□□ -0.99
UPF3AP1-201ENST00000413731 ADRB2P07550 413 aa8.84□□□□□ -0.99
UPF3AP1-201ENST00000413731 HMGA1P17096 107 aaKnown RBP8.84□□□□□ -0.99
UPF3AP1-201ENST00000413731 BCKDHBP21953 392 aa8.84□□□□□ -0.99
UPF3AP1-201ENST00000413731 DDX6P26196 483 aaKnown RBP eCLIP8.84□□□□□ -0.99
UPF3AP1-201ENST00000413731 GJA4P35212 333 aa8.84□□□□□ -0.99
UPF3AP1-201ENST00000413731 TUFMP49411 452 aaKnown RBP8.84□□□□□ -0.99
UPF3AP1-201ENST00000413731 GALK1P51570 392 aa8.84□□□□□ -0.99
UPF3AP1-201ENST00000413731 SKOR1P84550 965 aa8.84□□□□□ -0.99
UPF3AP1-201ENST00000413731 DAB2P98082 770 aa8.84□□□□□ -0.99
UPF3AP1-201ENST00000413731 FAM160A1Q05DH4 1040 aa8.84□□□□□ -0.99
UPF3AP1-201ENST00000413731 DMC1Q14565 340 aa8.84□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms