RNA–Protein interactions for RNA: ENST00000412615.6

TRAFD1-202, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TRAFD1, Length 2,697 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-202ENST00000412615 GRAP2O75791 330 aa11.98□□□□□ -0.49
TRAFD1-202ENST00000412615 ZWINTO95229 277 aa11.98□□□□□ -0.49
TRAFD1-202ENST00000412615 NPTXRO95502 500 aa11.98□□□□□ -0.49
TRAFD1-202ENST00000412615 KRT4P19013 534 aa11.98□□□□□ -0.49
TRAFD1-202ENST00000412615 RPA3P35244 121 aaPredicted RBP11.98□□□□□ -0.49
TRAFD1-202ENST00000412615 ATP5OP48047 213 aa11.98□□□□□ -0.49
TRAFD1-202ENST00000412615 YARSP54577 528 aaKnown RBP11.98□□□□□ -0.49
TRAFD1-202ENST00000412615 SLC6A3Q01959 620 aa11.98□□□□□ -0.49
TRAFD1-202ENST00000412615 SNCBQ16143 134 aa11.98□□□□□ -0.49
TRAFD1-202ENST00000412615 PDK4Q16654 411 aa11.98□□□□□ -0.49
TRAFD1-202ENST00000412615 DGKDQ16760 1214 aa11.98□□□□□ -0.49
TRAFD1-202ENST00000412615 DUSP28Q4G0W2 176 aa11.98□□□□□ -0.49
TRAFD1-202ENST00000412615 CGB2Q6NT52 195 aa11.98□□□□□ -0.49
TRAFD1-202ENST00000412615 PMF1Q6P1K2 205 aa11.98□□□□□ -0.49
TRAFD1-202ENST00000412615 OLFML1Q6UWY5 402 aa11.98□□□□□ -0.49
TRAFD1-202ENST00000412615 DPP9Q86TI2 863 aa11.98□□□□□ -0.49
TRAFD1-202ENST00000412615 TMEM110Q86TL2 294 aa11.98□□□□□ -0.49
TRAFD1-202ENST00000412615 TEKT4Q8WW24 435 aa11.98□□□□□ -0.49
TRAFD1-202ENST00000412615 PIWIL1Q96J94 861 aaKnown RBP11.98□□□□□ -0.49
TRAFD1-202ENST00000412615 TBCBQ99426 244 aa11.98□□□□□ -0.49
TRAFD1-202ENST00000412615 PAFAH2Q99487 392 aa11.98□□□□□ -0.49
TRAFD1-202ENST00000412615 SLC4A5Q9BY07 1137 aa11.98□□□□□ -0.49
TRAFD1-202ENST00000412615 NGRNQ9NPE2 291 aaKnown RBP11.98□□□□□ -0.49
TRAFD1-202ENST00000412615 GGT7Q9UJ14 662 aa11.98□□□□□ -0.49
TRAFD1-202ENST00000412615 CFAP69A5D8W1 941 aa11.98□□□□□ -0.49
TRAFD1-202ENST00000412615 MMP3P08254 477 aa11.98□□□□□ -0.49
TRAFD1-202ENST00000412615 TGM2P21980 687 aa11.98□□□□□ -0.49
TRAFD1-202ENST00000412615 GCLCP48506 637 aaPredicted RBP11.98□□□□□ -0.49
TRAFD1-202ENST00000412615 ATP11AP98196 1134 aa11.98□□□□□ -0.49
TRAFD1-202ENST00000412615 BNIP1Q12981 228 aa11.98□□□□□ -0.49
TRAFD1-202ENST00000412615 KIZQ2M2Z5 673 aa11.98□□□□□ -0.49
TRAFD1-202ENST00000412615 PKDCCQ504Y2 493 aa11.98□□□□□ -0.49
TRAFD1-202ENST00000412615 HHATQ5VTY9 493 aa11.98□□□□□ -0.49
TRAFD1-202ENST00000412615 SLC27A1Q6PCB7 646 aa11.98□□□□□ -0.49
TRAFD1-202ENST00000412615 FAM47EQ6ZV65 393 aa11.98□□□□□ -0.49
TRAFD1-202ENST00000412615 ACOT1Q86TX2 421 aa11.98□□□□□ -0.49
TRAFD1-202ENST00000412615 SESTD1Q86VW0 696 aa11.98□□□□□ -0.49
TRAFD1-202ENST00000412615 VSIG1Q86XK7 387 aa11.98□□□□□ -0.49
TRAFD1-202ENST00000412615 ZDHHC17Q8IUH5 632 aa11.98□□□□□ -0.49
TRAFD1-202ENST00000412615 LRRC52Q8N7C0 313 aa11.98□□□□□ -0.49
TRAFD1-202ENST00000412615 BEST2Q8NFU1 509 aa11.98□□□□□ -0.49
TRAFD1-202ENST00000412615 OR6J1Q8NGC5 347 aa11.98□□□□□ -0.49
TRAFD1-202ENST00000412615 STK32AQ8WU08 396 aa11.98□□□□□ -0.49
TRAFD1-202ENST00000412615 USP6NLQ92738 828 aa11.98□□□□□ -0.49
TRAFD1-202ENST00000412615 ALKBH8Q96BT7 664 aaKnown RBP11.98□□□□□ -0.49
TRAFD1-202ENST00000412615 CYTH2Q99418 400 aa11.98□□□□□ -0.49
TRAFD1-202ENST00000412615 MRPL45Q9BRJ2 306 aaKnown RBP11.98□□□□□ -0.49
TRAFD1-202ENST00000412615 GCOM2Q9BZD3 368 aaPredicted RBP11.98□□□□□ -0.49
TRAFD1-202ENST00000412615 SNTG2Q9NY99 539 aa11.98□□□□□ -0.49
TRAFD1-202ENST00000412615 PAK5Q9P286 719 aa11.98□□□□□ -0.49
TRAFD1-202ENST00000412615 APOL1O14791 398 aa11.97□□□□□ -0.49
TRAFD1-202ENST00000412615 CHADO15335 359 aa11.97□□□□□ -0.49
TRAFD1-202ENST00000412615 MGRN1O60291 552 aa11.97□□□□□ -0.49
TRAFD1-202ENST00000412615 HOXD8P13378 290 aaPredicted RBP11.97□□□□□ -0.49
TRAFD1-202ENST00000412615 SMPD1P17405 629 aa11.97□□□□□ -0.49
TRAFD1-202ENST00000412615 ELF3P78545 371 aaPredicted RBP11.97□□□□□ -0.49
TRAFD1-202ENST00000412615 DNAJC3Q13217 504 aa11.97□□□□□ -0.49
TRAFD1-202ENST00000412615 RAB6CQ53S08 254 aa11.97□□□□□ -0.49
TRAFD1-202ENST00000412615 SWT1Q5T5J6 900 aaKnown RBP11.97□□□□□ -0.49
TRAFD1-202ENST00000412615 C1orf228Q6PIY5 440 aa11.97□□□□□ -0.49
TRAFD1-202ENST00000412615 UNC93AQ86WB7 457 aa11.97□□□□□ -0.49
TRAFD1-202ENST00000412615 TTC30AQ86WT1 665 aa11.97□□□□□ -0.49
TRAFD1-202ENST00000412615 FITM2Q8N6M3 262 aa11.97□□□□□ -0.49
TRAFD1-202ENST00000412615 PLD5Q8N7P1 536 aa11.97□□□□□ -0.49
TRAFD1-202ENST00000412615 LRRC8CQ8TDW0 803 aa11.97□□□□□ -0.49
TRAFD1-202ENST00000412615 FAM172AQ8WUF8 416 aa11.97□□□□□ -0.49
TRAFD1-202ENST00000412615 SLC35F5Q8WV83 523 aa11.97□□□□□ -0.49
TRAFD1-202ENST00000412615 FAF2Q96CS3 445 aa11.97□□□□□ -0.49
TRAFD1-202ENST00000412615 WDR83Q9BRX9 315 aaKnown RBP11.97□□□□□ -0.49
TRAFD1-202ENST00000412615 FRMD8Q9BZ67 464 aaPredicted RBP11.97□□□□□ -0.49
TRAFD1-202ENST00000412615 RAB6CQ9H0N0 254 aa11.97□□□□□ -0.49
TRAFD1-202ENST00000412615 ECT2Q9H8V3 914 aa11.97□□□□□ -0.49
TRAFD1-202ENST00000412615 SPON1Q9HCB6 807 aa11.97□□□□□ -0.49
TRAFD1-202ENST00000412615 MORF4L1Q9UBU8 362 aa11.97□□□□□ -0.49
TRAFD1-202ENST00000412615 PHTF1Q9UMS5 762 aa11.97□□□□□ -0.49
TRAFD1-202ENST00000412615 UNCXA6NJT0 531 aa11.97□□□□□ -0.49
TRAFD1-202ENST00000412615 SPAG6O75602 509 aa11.97□□□□□ -0.49
TRAFD1-202ENST00000412615 IL4RP24394 825 aa11.97□□□□□ -0.49
TRAFD1-202ENST00000412615 HOXA11P31270 313 aaPredicted RBP11.97□□□□□ -0.49
TRAFD1-202ENST00000412615 BCAR1P56945 870 aa11.97□□□□□ -0.49
TRAFD1-202ENST00000412615 KCNJ11Q14654 390 aa11.97□□□□□ -0.49
TRAFD1-202ENST00000412615 ZBTB6Q15916 424 aa11.97□□□□□ -0.49
TRAFD1-202ENST00000412615 SEPT7Q16181 437 aaKnown RBP11.97□□□□□ -0.49
TRAFD1-202ENST00000412615 CATSPER4Q7RTX7 472 aa11.97□□□□□ -0.49
TRAFD1-202ENST00000412615 SCUBE3Q8IX30 993 aa11.97□□□□□ -0.49
TRAFD1-202ENST00000412615 SNX27Q96L92 541 aa11.97□□□□□ -0.49
TRAFD1-202ENST00000412615 ZMAT2Q96NC0 199 aaKnown RBP11.97□□□□□ -0.49
TRAFD1-202ENST00000412615 ADAMTS10Q9H324 1103 aa11.97□□□□□ -0.49
TRAFD1-202ENST00000412615 ABHD16BQ9H3Z7 469 aa11.97□□□□□ -0.49
TRAFD1-202ENST00000412615 PCDH18Q9HCL0 1135 aa11.97□□□□□ -0.49
TRAFD1-202ENST00000412615 SETD4Q9NVD3 440 aa11.97□□□□□ -0.49
TRAFD1-202ENST00000412615 GINS2Q9Y248 185 aa11.97□□□□□ -0.49
TRAFD1-202ENST00000412615 MDM4O15151 490 aa11.96□□□□□ -0.49
TRAFD1-202ENST00000412615 ELK3P41970 407 aa11.96□□□□□ -0.49
TRAFD1-202ENST00000412615 NRLP54845 237 aa11.96□□□□□ -0.49
TRAFD1-202ENST00000412615 CCDC15Q0P6D6 951 aa11.96□□□□□ -0.49
TRAFD1-202ENST00000412615 CBLBQ13191 982 aa11.96□□□□□ -0.49
TRAFD1-202ENST00000412615 EFTUD2Q15029 972 aaKnown RBP eCLIP11.96□□□□□ -0.492e-6■■□□□ 14.2
TRAFD1-202ENST00000412615 PCBP1Q15365 356 aaKnown RBP eCLIP11.96□□□□□ -0.49
TRAFD1-202ENST00000412615 SLC1A5Q15758 541 aa11.96□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms