RNA–Protein interactions for RNA: ENST00000412570.5

SMPD4-203, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 2

Gene SMPD4, Length 3,601 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-203ENST00000412570 ZNF623O75123 536 aa10.19□□□□□ -0.78
SMPD4-203ENST00000412570 PAEPP09466 180 aa10.19□□□□□ -0.78
SMPD4-203ENST00000412570 BCAT1P54687 386 aa10.19□□□□□ -0.78
SMPD4-203ENST00000412570 USP46P62068 366 aa10.19□□□□□ -0.78
SMPD4-203ENST00000412570 C9orf50Q5SZB4 431 aa10.19□□□□□ -0.78
SMPD4-203ENST00000412570 PAPD7Q5XG87 772 aaKnown RBP10.19□□□□□ -0.78
SMPD4-203ENST00000412570 KCNT2Q6UVM3 1135 aa10.19□□□□□ -0.78
SMPD4-203ENST00000412570 TMEM199Q8N511 208 aa10.19□□□□□ -0.78
SMPD4-203ENST00000412570 USP38Q8NB14 1042 aa10.19□□□□□ -0.78
SMPD4-203ENST00000412570 MSANTD4Q8NCY6 345 aa10.19□□□□□ -0.78
SMPD4-203ENST00000412570 LBHD1Q9BQE6 289 aaPredicted RBP10.19□□□□□ -0.78
SMPD4-203ENST00000412570 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP10.19□□□□□ -0.783e-8■□□□□ 9.5
SMPD4-203ENST00000412570 PRRG1O14668 218 aa10.18□□□□□ -0.78
SMPD4-203ENST00000412570 PMM2O15305 246 aa10.18□□□□□ -0.78
SMPD4-203ENST00000412570 LRCH4O75427 683 aa10.18□□□□□ -0.78
SMPD4-203ENST00000412570 PROSCO94903 275 aa10.18□□□□□ -0.78
SMPD4-203ENST00000412570 GLI1P08151 1106 aa10.18□□□□□ -0.78
SMPD4-203ENST00000412570 PCSK1P29120 753 aa10.18□□□□□ -0.78
SMPD4-203ENST00000412570 WDR5P61964 334 aaKnown RBP10.18□□□□□ -0.78
SMPD4-203ENST00000412570 PTP4A2Q12974 167 aa10.18□□□□□ -0.78
SMPD4-203ENST00000412570 C16orf59Q7L2K0 433 aa10.18□□□□□ -0.78
SMPD4-203ENST00000412570 KDELC2Q7Z4H8 507 aa10.18□□□□□ -0.78
SMPD4-203ENST00000412570 FMNL3Q8IVF7 1028 aa10.18□□□□□ -0.78
SMPD4-203ENST00000412570 CCDC185Q8N715 623 aa10.18□□□□□ -0.78
SMPD4-203ENST00000412570 ANKRD52Q8NB46 1076 aa10.18□□□□□ -0.78
SMPD4-203ENST00000412570 FTHL17Q9BXU8 183 aa10.18□□□□□ -0.78
SMPD4-203ENST00000412570 L2HGDHQ9H9P8 463 aa10.18□□□□□ -0.78
SMPD4-203ENST00000412570 ZNF148Q9UQR1 794 aa10.18□□□□□ -0.78
SMPD4-203ENST00000412570 TMEM191CA6NGB0 347 aa10.18□□□□□ -0.78
SMPD4-203ENST00000412570 DDX3YO15523 660 aaKnown RBP10.18□□□□□ -0.78
SMPD4-203ENST00000412570 SART1O43290 800 aaKnown RBP10.18□□□□□ -0.78
SMPD4-203ENST00000412570 FGBP02675 491 aa10.18□□□□□ -0.78
SMPD4-203ENST00000412570 GPD1P21695 349 aa10.18□□□□□ -0.78
SMPD4-203ENST00000412570 EFEMP1Q12805 493 aa10.18□□□□□ -0.78
SMPD4-203ENST00000412570 DENND2CQ68D51 928 aa10.18□□□□□ -0.78
SMPD4-203ENST00000412570 CD300LGQ6UXG3 332 aa10.18□□□□□ -0.78
SMPD4-203ENST00000412570 ZNF677Q86XU0 584 aa10.18□□□□□ -0.78
SMPD4-203ENST00000412570 ZDHHC14Q8IZN3 488 aa10.18□□□□□ -0.78
SMPD4-203ENST00000412570 ZMIZ2Q8NF64 920 aa10.18□□□□□ -0.78
SMPD4-203ENST00000412570 ASIC3Q9UHC3 531 aa10.18□□□□□ -0.78
SMPD4-203ENST00000412570 CDH22Q9UJ99 828 aa10.18□□□□□ -0.78
SMPD4-203ENST00000412570 SCINQ9Y6U3 715 aa10.18□□□□□ -0.78
SMPD4-203ENST00000412570 ZNF236Q9UL36 1845 aa10.18□□□□□ -0.78
SMPD4-203ENST00000412570 COL6A3P12111 3177 aa10.18□□□□□ -0.78
SMPD4-203ENST00000412570 GON4LQ3T8J9 2241 aa10.18□□□□□ -0.78
SMPD4-203ENST00000412570 RARAP10276 462 aa10.18□□□□□ -0.78
SMPD4-203ENST00000412570 INCA1Q0VD86 236 aa10.18□□□□□ -0.78
SMPD4-203ENST00000412570 WHAMMP3Q1A5X7 153 aa10.18□□□□□ -0.78
SMPD4-203ENST00000412570 MRPL10Q7Z7H8 261 aaKnown RBP10.18□□□□□ -0.78
SMPD4-203ENST00000412570 NT5DC4Q86YG4 428 aa10.18□□□□□ -0.78
SMPD4-203ENST00000412570 TP53INP2Q8IXH6 220 aa10.18□□□□□ -0.78
SMPD4-203ENST00000412570 ARFGAP1Q8N6T3 406 aa10.18□□□□□ -0.78
SMPD4-203ENST00000412570 FAM81BQ96LP2 452 aa10.18□□□□□ -0.78
SMPD4-203ENST00000412570 ZNF512Q96ME7 567 aaPredicted RBP10.18□□□□□ -0.78
SMPD4-203ENST00000412570 PEBP4Q96S96 227 aa10.18□□□□□ -0.78
SMPD4-203ENST00000412570 COLEC11Q9BWP8 271 aa10.18□□□□□ -0.78
SMPD4-203ENST00000412570 MAK16Q9BXY0 300 aaKnown RBP10.18□□□□□ -0.78
SMPD4-203ENST00000412570 CALCOCO1Q9P1Z2 691 aa10.18□□□□□ -0.78
SMPD4-203ENST00000412570 USP18Q9UMW8 372 aa10.18□□□□□ -0.78
SMPD4-203ENST00000412570 SBDSQ9Y3A5 250 aaKnown RBP eCLIP10.18□□□□□ -0.78
SMPD4-203ENST00000412570 PITPNM1O00562 1244 aa10.17□□□□□ -0.78
SMPD4-203ENST00000412570 CST8O60676 142 aa10.17□□□□□ -0.78
SMPD4-203ENST00000412570 LRPAP1P30533 357 aa10.17□□□□□ -0.78
SMPD4-203ENST00000412570 LHX1P48742 406 aa10.17□□□□□ -0.78
SMPD4-203ENST00000412570 CARSP49589 748 aaKnown RBP10.17□□□□□ -0.78
SMPD4-203ENST00000412570 C1QBPQ07021 282 aaKnown RBP10.17□□□□□ -0.78
SMPD4-203ENST00000412570 PCBP1Q15365 356 aaKnown RBP eCLIP10.17□□□□□ -0.789e-6■■□□□ 13.3
SMPD4-203ENST00000412570 DNAJC21Q5F1R6 531 aaKnown RBP10.17□□□□□ -0.78
SMPD4-203ENST00000412570 TRIM72Q6ZMU5 477 aa10.17□□□□□ -0.78
SMPD4-203ENST00000412570 PHF13Q86YI8 300 aaPredicted RBP10.17□□□□□ -0.78
SMPD4-203ENST00000412570 SLC35F5Q8WV83 523 aa10.17□□□□□ -0.78
SMPD4-203ENST00000412570 DUSP16Q9BY84 665 aa10.17□□□□□ -0.78
SMPD4-203ENST00000412570 SLITRK6Q9H5Y7 841 aa10.17□□□□□ -0.78
SMPD4-203ENST00000412570 IGFLR1Q9H665 355 aa10.17□□□□□ -0.78
SMPD4-203ENST00000412570 ABCB6Q9NP58 842 aa10.17□□□□□ -0.78
SMPD4-203ENST00000412570 UVRAGQ9P2Y5 699 aa10.17□□□□□ -0.78
SMPD4-203ENST00000412570 XPO7Q9UIA9 1087 aaKnown RBP10.17□□□□□ -0.78
SMPD4-203ENST00000412570 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP10.17□□□□□ -0.78
SMPD4-203ENST00000412570 GOLGA8CPA6NN73 597 aa10.17□□□□□ -0.78
SMPD4-203ENST00000412570 TRAPPC3O43617 180 aa10.17□□□□□ -0.78
SMPD4-203ENST00000412570 EOMESO95936 686 aa10.17□□□□□ -0.78
SMPD4-203ENST00000412570 TIMP1P01033 207 aa10.17□□□□□ -0.78
SMPD4-203ENST00000412570 AMHP03971 560 aa10.17□□□□□ -0.78
SMPD4-203ENST00000412570 CLCN6P51797 869 aa10.17□□□□□ -0.78
SMPD4-203ENST00000412570 SLC5A3P53794 718 aa10.17□□□□□ -0.78
SMPD4-203ENST00000412570 PLTPP55058 493 aa10.17□□□□□ -0.78
SMPD4-203ENST00000412570 SLC6A3Q01959 620 aa10.17□□□□□ -0.78
SMPD4-203ENST00000412570 CKAP4Q07065 602 aaKnown RBP10.17□□□□□ -0.78
SMPD4-203ENST00000412570 CCDC14Q49A88 953 aa10.17□□□□□ -0.78
SMPD4-203ENST00000412570 INTS6LQ5JSJ4 861 aaKnown RBP10.17□□□□□ -0.78
SMPD4-203ENST00000412570 MICALL1Q8N3F8 863 aa10.17□□□□□ -0.78
SMPD4-203ENST00000412570 C3orf20Q8ND61 904 aa10.17□□□□□ -0.78
SMPD4-203ENST00000412570 CCNYQ8ND76 341 aa10.17□□□□□ -0.78
SMPD4-203ENST00000412570 MYCBPAPQ8TBZ2 947 aa10.17□□□□□ -0.78
SMPD4-203ENST00000412570 CELF6Q96J87 481 aaKnown RBP10.17□□□□□ -0.78
SMPD4-203ENST00000412570 C17orf80Q9BSJ5 609 aa10.17□□□□□ -0.78
SMPD4-203ENST00000412570 TMEM121Q9BTD3 319 aa10.17□□□□□ -0.78
SMPD4-203ENST00000412570 MARCH5Q9NX47 278 aa10.17□□□□□ -0.78
SMPD4-203ENST00000412570 IP6K2Q9UHH9 426 aa10.17□□□□□ -0.78
SMPD4-203ENST00000412570 DERAQ9Y315 318 aa10.17□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms