RNA–Protein interactions for RNA: ENST00000411840.6

MRPL48-204, Transcript of mitochondrial ribosomal protein L48, humanhuman

TSL 1 (best) BASIC

Gene MRPL48, Length 1,197 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL48-204ENST00000411840 KIR2DL1P43626 348 aaPredicted RBP9.68□□□□□ -0.86
MRPL48-204ENST00000411840 CYP2J2P51589 502 aa9.68□□□□□ -0.86
MRPL48-204ENST00000411840 MYL6P60660 151 aa9.68□□□□□ -0.86
MRPL48-204ENST00000411840 TNNC1P63316 161 aa9.68□□□□□ -0.86
MRPL48-204ENST00000411840 FOXK1P85037 733 aa9.68□□□□□ -0.86
MRPL48-204ENST00000411840 AMPD3Q01432 767 aa9.68□□□□□ -0.86
MRPL48-204ENST00000411840 IFRD2Q12894 506 aaPredicted RBP9.68□□□□□ -0.86
MRPL48-204ENST00000411840 FOXC1Q12948 553 aa9.68□□□□□ -0.86
MRPL48-204ENST00000411840 LPCAT2Q7L5N7 544 aa9.68□□□□□ -0.86
MRPL48-204ENST00000411840 C12orf40Q86WS4 652 aa9.68□□□□□ -0.86
MRPL48-204ENST00000411840 DDX42Q86XP3 938 aaKnown RBP eCLIP9.68□□□□□ -0.86
MRPL48-204ENST00000411840 TMEFF1Q8IYR6 380 aa9.68□□□□□ -0.86
MRPL48-204ENST00000411840 NUP93Q8N1F7 819 aa9.68□□□□□ -0.86
MRPL48-204ENST00000411840 FRMD1Q8N878 549 aa9.68□□□□□ -0.86
MRPL48-204ENST00000411840 XXYLT1Q8NBI6 393 aa9.68□□□□□ -0.86
MRPL48-204ENST00000411840 ZNF516Q92618 1163 aa9.68□□□□□ -0.86
MRPL48-204ENST00000411840 FNBP1Q96RU3 617 aa9.68□□□□□ -0.86
MRPL48-204ENST00000411840 KCNK16Q96T55 309 aa9.68□□□□□ -0.86
MRPL48-204ENST00000411840 CGRRF1Q99675 332 aa9.68□□□□□ -0.86
MRPL48-204ENST00000411840 ZSCAN16Q9H4T2 348 aaPredicted RBP9.68□□□□□ -0.86
MRPL48-204ENST00000411840 POLMQ9NP87 494 aaPredicted RBP9.68□□□□□ -0.86
MRPL48-204ENST00000411840 ZDHHC4Q9NPG8 344 aa9.68□□□□□ -0.86
MRPL48-204ENST00000411840 TBC1D14Q9P2M4 693 aa9.68□□□□□ -0.86
MRPL48-204ENST00000411840 NXF1Q9UBU9 619 aaKnown RBP9.68□□□□□ -0.86
MRPL48-204ENST00000411840 WASF3Q9UPY6 502 aa9.68□□□□□ -0.86
MRPL48-204ENST00000411840 MTMR6Q9Y217 621 aa9.68□□□□□ -0.86
MRPL48-204ENST00000411840 AKAP13Q12802 2813 aa9.68□□□□□ -0.86
MRPL48-204ENST00000411840 KIF26AQ9ULI4 1882 aaPredicted RBP9.68□□□□□ -0.86
MRPL48-204ENST00000411840 ITPR1Q14643 2758 aa9.67□□□□□ -0.86
MRPL48-204ENST00000411840 C1QTNF9BB2RNN3 333 aa9.67□□□□□ -0.86
MRPL48-204ENST00000411840 COCHO43405 550 aa9.67□□□□□ -0.86
MRPL48-204ENST00000411840 ADAM23O75077 832 aa9.67□□□□□ -0.86
MRPL48-204ENST00000411840 STAU1O95793 577 aaKnown RBP9.67□□□□□ -0.86
MRPL48-204ENST00000411840 C1QTNF9P0C862 333 aa9.67□□□□□ -0.86
MRPL48-204ENST00000411840 C7P10643 843 aa9.67□□□□□ -0.86
MRPL48-204ENST00000411840 ADH5P11766 374 aa9.67□□□□□ -0.86
MRPL48-204ENST00000411840 CSRP1P21291 193 aaKnown RBP9.67□□□□□ -0.86
MRPL48-204ENST00000411840 ATICP31939 592 aa9.67□□□□□ -0.86
MRPL48-204ENST00000411840 PTGER3P43115 390 aa9.67□□□□□ -0.86
MRPL48-204ENST00000411840 NASPP49321 788 aaPredicted RBP9.67□□□□□ -0.86
MRPL48-204ENST00000411840 CDH8P55286 799 aa9.67□□□□□ -0.86
MRPL48-204ENST00000411840 SNRPFP62306 86 aaKnown RBP9.67□□□□□ -0.86
MRPL48-204ENST00000411840 ASIC1P78348 528 aa9.67□□□□□ -0.86
MRPL48-204ENST00000411840 KDSRQ06136 332 aa9.67□□□□□ -0.86
MRPL48-204ENST00000411840 CYP24A1Q07973 514 aa9.67□□□□□ -0.86
MRPL48-204ENST00000411840 ZNF252P-AS1Q0IIN9 211 aa9.67□□□□□ -0.86
MRPL48-204ENST00000411840 TRPC3Q13507 836 aa9.67□□□□□ -0.86
MRPL48-204ENST00000411840 BYSLQ13895 437 aaKnown RBP9.67□□□□□ -0.86
MRPL48-204ENST00000411840 STK38Q15208 465 aa9.67□□□□□ -0.86
MRPL48-204ENST00000411840 UAP1L1Q3KQV9 507 aa9.67□□□□□ -0.86
MRPL48-204ENST00000411840 HSF5Q4G112 596 aaPredicted RBP9.67□□□□□ -0.86
MRPL48-204ENST00000411840 EOGTQ5NDL2 527 aa9.67□□□□□ -0.86
MRPL48-204ENST00000411840 LY6G5CQ5SRR4 150 aa9.67□□□□□ -0.86
MRPL48-204ENST00000411840 HECTD3Q5T447 861 aa9.67□□□□□ -0.86
MRPL48-204ENST00000411840 CNNM4Q6P4Q7 775 aa9.67□□□□□ -0.86
MRPL48-204ENST00000411840 ARMCX6Q7L4S7 300 aa9.67□□□□□ -0.86
MRPL48-204ENST00000411840 NELFCDQ8IXH7 590 aa9.67□□□□□ -0.86
MRPL48-204ENST00000411840 PGBD3Q8N328 593 aa9.67□□□□□ -0.86
MRPL48-204ENST00000411840 NAT16Q8N8M0 369 aa9.67□□□□□ -0.86
MRPL48-204ENST00000411840 IQUBQ8NA54 791 aa9.67□□□□□ -0.86
MRPL48-204ENST00000411840 LINC00301Q8NCQ3 95 aa9.67□□□□□ -0.86
MRPL48-204ENST00000411840 B3GALNT2Q8NCR0 500 aa9.67□□□□□ -0.86
MRPL48-204ENST00000411840 PDZD8Q8NEN9 1154 aa9.67□□□□□ -0.86
MRPL48-204ENST00000411840 SCAMP5Q8TAC9 235 aa9.67□□□□□ -0.86
MRPL48-204ENST00000411840 WHAMMQ8TF30 809 aa9.67□□□□□ -0.86
MRPL48-204ENST00000411840 SCFD1Q8WVM8 642 aa9.67□□□□□ -0.86
MRPL48-204ENST00000411840 HMGB4Q8WW32 186 aa9.67□□□□□ -0.86
MRPL48-204ENST00000411840 OVCA2Q8WZ82 227 aa9.67□□□□□ -0.86
MRPL48-204ENST00000411840 C7orf25Q9BPX7 421 aa9.67□□□□□ -0.86
MRPL48-204ENST00000411840 GZF1Q9H116 711 aaPredicted RBP9.67□□□□□ -0.86
MRPL48-204ENST00000411840 XYLT2Q9H1B5 865 aa9.67□□□□□ -0.86
MRPL48-204ENST00000411840 CUEDC2Q9H467 287 aa9.67□□□□□ -0.86
MRPL48-204ENST00000411840 TMEM74BQ9NUR3 256 aa9.67□□□□□ -0.86
MRPL48-204ENST00000411840 BCCIPQ9P287 314 aaKnown RBP eCLIP9.67□□□□□ -0.86
MRPL48-204ENST00000411840 TFIP11Q9UBB9 837 aaKnown RBP9.67□□□□□ -0.86
MRPL48-204ENST00000411840 EVLQ9UI08 416 aaPredicted RBP9.67□□□□□ -0.86
MRPL48-204ENST00000411840 MBD1Q9UIS9 605 aaPredicted RBP9.67□□□□□ -0.86
MRPL48-204ENST00000411840 RALYQ9UKM9 306 aaKnown RBP9.67□□□□□ -0.86
MRPL48-204ENST00000411840 SCN1AP35498 2009 aa9.66□□□□□ -0.86
MRPL48-204ENST00000411840 NBEAQ8NFP9 2946 aa9.66□□□□□ -0.86
MRPL48-204ENST00000411840 TBC1D3BA6NDS4 549 aa9.66□□□□□ -0.86
MRPL48-204ENST00000411840 PALM2-AKAP2B1ALY0 433 aaPredicted RBP9.66□□□□□ -0.86
MRPL48-204ENST00000411840 SPTLC2O15270 562 aa9.66□□□□□ -0.86
MRPL48-204ENST00000411840 PHACTR2O75167 634 aa9.66□□□□□ -0.86
MRPL48-204ENST00000411840 RTN3O95197 1032 aaPredicted RBP9.66□□□□□ -0.86
MRPL48-204ENST00000411840 TOP3BO95985 862 aaKnown RBP9.66□□□□□ -0.86
MRPL48-204ENST00000411840 SPINK2P20155 84 aa9.66□□□□□ -0.86
MRPL48-204ENST00000411840 GAD2Q05329 585 aa9.66□□□□□ -0.86
MRPL48-204ENST00000411840 LMAN2Q12907 356 aa9.66□□□□□ -0.86
MRPL48-204ENST00000411840 MAP7D1Q3KQU3 841 aa9.66□□□□□ -0.86
MRPL48-204ENST00000411840 TRIM61Q5EBN2 209 aa9.66□□□□□ -0.86
MRPL48-204ENST00000411840 SPDYCQ5MJ68 293 aa9.66□□□□□ -0.86
MRPL48-204ENST00000411840 FAM26FQ5R3K3 315 aa9.66□□□□□ -0.86
MRPL48-204ENST00000411840 SNX30Q5VWJ9 437 aa9.66□□□□□ -0.86
MRPL48-204ENST00000411840 BTBD8Q5XKL5 378 aa9.66□□□□□ -0.86
MRPL48-204ENST00000411840 UNQ6494/PRO21346Q6UXR6 183 aa9.66□□□□□ -0.86
MRPL48-204ENST00000411840 PAQR9Q6ZVX9 377 aa9.66□□□□□ -0.86
MRPL48-204ENST00000411840 TMEM25Q86YD3 366 aa9.66□□□□□ -0.86
MRPL48-204ENST00000411840 SYT12Q8IV01 421 aa9.66□□□□□ -0.86
MRPL48-204ENST00000411840 PLPP6Q8IY26 295 aa9.66□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 91.5 ms