RNA–Protein interactions for RNA: ENST00000409570.3

SCRN1-203, Transcript of secernin 1, humanhuman

TSL 4 BASIC

Gene SCRN1, Length 535 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCRN1-203ENST00000409570 ANKRD36BP1Q96IX9 119 aa18.02■□□□□ 0.48
SCRN1-203ENST00000409570 C8orf48Q96LL4 319 aa18.02■□□□□ 0.48
SCRN1-203ENST00000409570 UPF2Q9HAU5 1272 aaKnown RBP18.02■□□□□ 0.48
SCRN1-203ENST00000409570 CAPN10Q9HC96 672 aa18.02■□□□□ 0.48
SCRN1-203ENST00000409570 OLFML3Q9NRN5 406 aa18.02■□□□□ 0.48
SCRN1-203ENST00000409570 EHD2Q9NZN4 543 aa18.02■□□□□ 0.48
SCRN1-203ENST00000409570 STK17AQ9UEE5 414 aa18.02■□□□□ 0.48
SCRN1-203ENST00000409570 PCDHB13Q9Y5F0 798 aa18.02■□□□□ 0.48
SCRN1-203ENST00000409570 GTF3C3Q9Y5Q9 886 aa18.02■□□□□ 0.48
SCRN1-203ENST00000409570 PTPRBP23467 1997 aa18.02■□□□□ 0.47
SCRN1-203ENST00000409570 ABL1P00519 1130 aa18.01■□□□□ 0.47
SCRN1-203ENST00000409570 CAPNS1P04632 268 aa18.01■□□□□ 0.47
SCRN1-203ENST00000409570 MBL2P11226 248 aaPredicted RBP18.01■□□□□ 0.47
SCRN1-203ENST00000409570 ATXN3P54252 364 aaPredicted RBP18.01■□□□□ 0.47
SCRN1-203ENST00000409570 CACNA2D1P54289 1103 aa18.01■□□□□ 0.47
SCRN1-203ENST00000409570 LY6G5CQ5SRR4 150 aa18.01■□□□□ 0.47
SCRN1-203ENST00000409570 GPD1LQ8N335 351 aa18.01■□□□□ 0.47
SCRN1-203ENST00000409570 HDDC3Q8N4P3 179 aa18.01■□□□□ 0.47
SCRN1-203ENST00000409570 CHCHD4Q8N4Q1 142 aa18.01■□□□□ 0.47
SCRN1-203ENST00000409570 DEFB119Q8N690 84 aa18.01■□□□□ 0.47
SCRN1-203ENST00000409570 CEP76Q8TAP6 659 aa18.01■□□□□ 0.47
SCRN1-203ENST00000409570 TMX3Q96JJ7 454 aa18.01■□□□□ 0.47
SCRN1-203ENST00000409570 GTPBP2Q9BX10 602 aaKnown RBP18.01■□□□□ 0.47
SCRN1-203ENST00000409570 TMEM30AQ9NV96 361 aa18.01■□□□□ 0.47
SCRN1-203ENST00000409570 PALM2-AKAP2B1ALY0 433 aaPredicted RBP18■□□□□ 0.47
SCRN1-203ENST00000409570 H0Y626 953 aa18■□□□□ 0.47
SCRN1-203ENST00000409570 AP5Z1O43299 807 aa18■□□□□ 0.47
SCRN1-203ENST00000409570 OPHN1O60890 802 aa18■□□□□ 0.47
SCRN1-203ENST00000409570 TRIM16O95361 564 aa18■□□□□ 0.47
SCRN1-203ENST00000409570 SERPINF2P08697 491 aa18■□□□□ 0.47
SCRN1-203ENST00000409570 GABRG2P18507 467 aa18■□□□□ 0.47
SCRN1-203ENST00000409570 RPL6Q02878 288 aaKnown RBP18■□□□□ 0.47
SCRN1-203ENST00000409570 GFPT1Q06210 699 aaPredicted RBP18■□□□□ 0.47
SCRN1-203ENST00000409570 MDH1BQ5I0G3 518 aa18■□□□□ 0.47
SCRN1-203ENST00000409570 DDX42Q86XP3 938 aaKnown RBP eCLIP18■□□□□ 0.47
SCRN1-203ENST00000409570 ETFBKMTQ8IXQ9 262 aa18■□□□□ 0.47
SCRN1-203ENST00000409570 ZFRQ96KR1 1074 aaKnown RBP18■□□□□ 0.47
SCRN1-203ENST00000409570 MRPL45Q9BRJ2 306 aaKnown RBP18■□□□□ 0.47
SCRN1-203ENST00000409570 TBC1D14Q9P2M4 693 aa18■□□□□ 0.47
SCRN1-203ENST00000409570 HCN2Q9UL51 889 aa18■□□□□ 0.47
SCRN1-203ENST00000409570 R3HCC1Q9Y3T6 440 aaKnown RBP18■□□□□ 0.47
SCRN1-203ENST00000409570 APC2O95996 2303 aa18■□□□□ 0.47
SCRN1-203ENST00000409570 LOC400499M0QZD8 3231 aa18■□□□□ 0.47
SCRN1-203ENST00000409570 E2F8A0AVK6 867 aa17.99■□□□□ 0.47
SCRN1-203ENST00000409570 FRMD3A2A2Y4 597 aa17.99■□□□□ 0.47
SCRN1-203ENST00000409570 PRPF6O94906 941 aaKnown RBP17.99■□□□□ 0.47
SCRN1-203ENST00000409570 TNNC2P02585 160 aa17.99■□□□□ 0.47
SCRN1-203ENST00000409570 CD59P13987 128 aa17.99■□□□□ 0.47
SCRN1-203ENST00000409570 GAD2Q05329 585 aa17.99■□□□□ 0.47
SCRN1-203ENST00000409570 ZNF33AQ06730 810 aa17.99■□□□□ 0.47
SCRN1-203ENST00000409570 ALCAMQ13740 583 aa17.99■□□□□ 0.47
SCRN1-203ENST00000409570 TDRD10Q5VZ19 366 aaKnown RBP17.99■□□□□ 0.47
SCRN1-203ENST00000409570 SLC36A4Q6YBV0 504 aa17.99■□□□□ 0.47
SCRN1-203ENST00000409570 SV2BQ7L1I2 683 aa17.99■□□□□ 0.47
SCRN1-203ENST00000409570 RAB44Q7Z6P3 723 aaPredicted RBP17.99■□□□□ 0.47
SCRN1-203ENST00000409570 MINDY1Q8N5J2 469 aa17.99■□□□□ 0.47
SCRN1-203ENST00000409570 ZNF513Q8N8E2 541 aaPredicted RBP17.99■□□□□ 0.47
SCRN1-203ENST00000409570 NAT16Q8N8M0 369 aa17.99■□□□□ 0.47
SCRN1-203ENST00000409570 OR2I1PQ8NGU4 316 aa17.99■□□□□ 0.47
SCRN1-203ENST00000409570 KCNV2Q8TDN2 545 aa17.99■□□□□ 0.47
SCRN1-203ENST00000409570 SLITRK1Q96PX8 696 aa17.99■□□□□ 0.47
SCRN1-203ENST00000409570 MMS19Q96T76 1030 aa17.99■□□□□ 0.47
SCRN1-203ENST00000409570 CALCOCO1Q9P1Z2 691 aa17.99■□□□□ 0.47
SCRN1-203ENST00000409570 CCDC39Q9UFE4 941 aa17.99■□□□□ 0.47
SCRN1-203ENST00000409570 IGSF10Q6WRI0 2623 aa17.99■□□□□ 0.47
SCRN1-203ENST00000409570 TBC1D3BA6NDS4 549 aa17.98■□□□□ 0.47
SCRN1-203ENST00000409570 TULP3O75386 442 aa17.98■□□□□ 0.47
SCRN1-203ENST00000409570 IDEP14735 1019 aa17.98■□□□□ 0.47
SCRN1-203ENST00000409570 RDXP35241 583 aaKnown RBP17.98■□□□□ 0.47
SCRN1-203ENST00000409570 GNL1P36915 607 aaPredicted RBP17.98■□□□□ 0.47
SCRN1-203ENST00000409570 IFRD2Q12894 506 aaPredicted RBP17.98■□□□□ 0.47
SCRN1-203ENST00000409570 DUOXA2Q1HG44 320 aa17.98■□□□□ 0.47
SCRN1-203ENST00000409570 ZNF423Q2M1K9 1284 aa17.98■□□□□ 0.47
SCRN1-203ENST00000409570 RRAGBQ5VZM2 374 aa17.98■□□□□ 0.47
SCRN1-203ENST00000409570 LARP1BQ659C4 914 aaKnown RBP17.98■□□□□ 0.47
SCRN1-203ENST00000409570 HS2ST1Q7LGA3 356 aa17.98■□□□□ 0.47
SCRN1-203ENST00000409570 BRAPQ7Z569 592 aa17.98■□□□□ 0.47
SCRN1-203ENST00000409570 PROSER1Q86XN7 944 aa17.98■□□□□ 0.47
SCRN1-203ENST00000409570 CBWD2Q8IUF1 395 aa17.98■□□□□ 0.47
SCRN1-203ENST00000409570 SLC41A1Q8IVJ1 513 aa17.98■□□□□ 0.47
SCRN1-203ENST00000409570 OTUB2Q96DC9 234 aa17.98■□□□□ 0.47
SCRN1-203ENST00000409570 ZNF518BQ9C0D4 1074 aa17.98■□□□□ 0.47
SCRN1-203ENST00000409570 KNL1Q8NG31 2342 aa17.98■□□□□ 0.47
SCRN1-203ENST00000409570 IGHV1OR15-9A0A0B4J2B8 117 aa17.97■□□□□ 0.47
SCRN1-203ENST00000409570 ZNF233A6NK53 670 aa17.97■□□□□ 0.47
SCRN1-203ENST00000409570 ARHGAP33O14559 1287 aa17.97■□□□□ 0.47
SCRN1-203ENST00000409570 KIAA0391O15091 583 aaKnown RBP17.97■□□□□ 0.47
SCRN1-203ENST00000409570 HOXC11O43248 304 aaPredicted RBP17.97■□□□□ 0.47
SCRN1-203ENST00000409570 COCHO43405 550 aa17.97■□□□□ 0.47
SCRN1-203ENST00000409570 TACC1O75410 805 aa17.97■□□□□ 0.47
SCRN1-203ENST00000409570 CD2BP2O95400 341 aaKnown RBP17.97■□□□□ 0.47
SCRN1-203ENST00000409570 HOXB2P14652 356 aa17.97■□□□□ 0.47
SCRN1-203ENST00000409570 PTPN1P18031 435 aaKnown RBP17.97■□□□□ 0.47
SCRN1-203ENST00000409570 RABEP1Q15276 862 aa17.97■□□□□ 0.47
SCRN1-203ENST00000409570 SURF1Q15526 300 aa17.97■□□□□ 0.47
SCRN1-203ENST00000409570 TRMT11Q7Z4G4 463 aaKnown RBP17.97■□□□□ 0.47
SCRN1-203ENST00000409570 RABEPKQ7Z6M1 372 aa17.97■□□□□ 0.47
SCRN1-203ENST00000409570 MIB1Q86YT6 1006 aa17.97■□□□□ 0.47
SCRN1-203ENST00000409570 TERB1Q8NA31 727 aa17.97■□□□□ 0.47
SCRN1-203ENST00000409570 SNX25Q9H3E2 840 aa17.97■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms