RNA–Protein interactions for RNA: ENST00000409458.3

GPNMB-203, Transcript of glycoprotein nmb, humanhuman

TSL 1 (best) BASIC

Gene GPNMB, Length 1,673 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-203ENST00000409458 SART1O43290 800 aaKnown RBP14.73□□□□□ -0.05
GPNMB-203ENST00000409458 HSF2BPO75031 334 aa14.73□□□□□ -0.05
GPNMB-203ENST00000409458 PHF2O75151 1096 aa14.73□□□□□ -0.05
GPNMB-203ENST00000409458 DAB1O75553 588 aa14.73□□□□□ -0.05
GPNMB-203ENST00000409458 TRUB2O95900 331 aaKnown RBP14.73□□□□□ -0.05
GPNMB-203ENST00000409458 AMHP03971 560 aa14.73□□□□□ -0.05
GPNMB-203ENST00000409458 RARAP10276 462 aa14.73□□□□□ -0.05
GPNMB-203ENST00000409458 TFE3P19532 575 aaPredicted RBP14.73□□□□□ -0.05
GPNMB-203ENST00000409458 WDR5P61964 334 aaKnown RBP14.73□□□□□ -0.05
GPNMB-203ENST00000409458 MRPL58Q14197 206 aaKnown RBP14.73□□□□□ -0.05
GPNMB-203ENST00000409458 HADHQ16836 314 aaKnown RBP14.73□□□□□ -0.05
GPNMB-203ENST00000409458 KCNT1Q5JUK3 1230 aa14.73□□□□□ -0.05
GPNMB-203ENST00000409458 EFHC1Q5JVL4 640 aa14.73□□□□□ -0.05
GPNMB-203ENST00000409458 ZFYVE27Q5T4F4 411 aa14.73□□□□□ -0.05
GPNMB-203ENST00000409458 MFSD7Q6UXD7 560 aa14.73□□□□□ -0.05
GPNMB-203ENST00000409458 CYP4V2Q6ZWL3 525 aaPredicted RBP14.73□□□□□ -0.05
GPNMB-203ENST00000409458 ARCQ7LC44 396 aa14.73□□□□□ -0.05
GPNMB-203ENST00000409458 SPATA2LQ8IUW3 424 aaPredicted RBP14.73□□□□□ -0.05
GPNMB-203ENST00000409458 RCOR2Q8IZ40 523 aa14.73□□□□□ -0.05
GPNMB-203ENST00000409458 TMEM199Q8N511 208 aa14.73□□□□□ -0.05
GPNMB-203ENST00000409458 FAM172AQ8WUF8 416 aa14.73□□□□□ -0.05
GPNMB-203ENST00000409458 TOP1MTQ969P6 601 aa14.73□□□□□ -0.05
GPNMB-203ENST00000409458 RBM41Q96IZ5 413 aaKnown RBP14.73□□□□□ -0.05
GPNMB-203ENST00000409458 HINFPQ9BQA5 517 aa14.73□□□□□ -0.05
GPNMB-203ENST00000409458 C11orf84Q9BUA3 381 aaPredicted RBP14.73□□□□□ -0.05
GPNMB-203ENST00000409458 UBXN6Q9BZV1 441 aa14.73□□□□□ -0.05
GPNMB-203ENST00000409458 RC3H2Q9HBD1 1191 aaKnown RBP14.73□□□□□ -0.05
GPNMB-203ENST00000409458 DMAP1Q9NPF5 467 aaPredicted RBP14.73□□□□□ -0.05
GPNMB-203ENST00000409458 ARGLU1Q9NWB6 273 aaPredicted RBP14.73□□□□□ -0.05
GPNMB-203ENST00000409458 USP18Q9UMW8 372 aa14.73□□□□□ -0.05
GPNMB-203ENST00000409458 FBXO21O94952 628 aa14.72□□□□□ -0.05
GPNMB-203ENST00000409458 HEXIM1O94992 359 aaKnown RBP14.72□□□□□ -0.05
GPNMB-203ENST00000409458 KRT7P08729 469 aa14.72□□□□□ -0.05
GPNMB-203ENST00000409458 PTPN9P43378 593 aa14.72□□□□□ -0.05
GPNMB-203ENST00000409458 DAOAP59103 153 aa14.72□□□□□ -0.05
GPNMB-203ENST00000409458 KLF1Q13351 362 aaPredicted RBP14.72□□□□□ -0.05
GPNMB-203ENST00000409458 KCTD19Q17RG1 926 aaPredicted RBP14.72□□□□□ -0.05
GPNMB-203ENST00000409458 CTXN3Q4LDR2 81 aa14.72□□□□□ -0.05
GPNMB-203ENST00000409458 RTP2Q5QGT7 225 aa14.72□□□□□ -0.05
GPNMB-203ENST00000409458 ZNF280DQ6N043 979 aa14.72□□□□□ -0.05
GPNMB-203ENST00000409458 FAM117BQ6P1L5 589 aa14.72□□□□□ -0.05
GPNMB-203ENST00000409458 SPOCD1Q6ZMY3 1216 aa14.72□□□□□ -0.05
GPNMB-203ENST00000409458 C4orf50Q6ZRC1 276 aa14.72□□□□□ -0.05
GPNMB-203ENST00000409458 HFE2Q6ZVN8 426 aa14.72□□□□□ -0.05
GPNMB-203ENST00000409458 TAS1R1Q7RTX1 841 aa14.72□□□□□ -0.05
GPNMB-203ENST00000409458 FAM149B1Q96BN6 582 aa14.72□□□□□ -0.05
GPNMB-203ENST00000409458 ZNF689Q96CS4 500 aaPredicted RBP14.72□□□□□ -0.05
GPNMB-203ENST00000409458 HEMGNQ9BXL5 484 aa14.72□□□□□ -0.05
GPNMB-203ENST00000409458 OSBPL8Q9BZF1 889 aa14.72□□□□□ -0.05
GPNMB-203ENST00000409458 SLITRK6Q9H5Y7 841 aa14.72□□□□□ -0.05
GPNMB-203ENST00000409458 NGRNQ9NPE2 291 aaKnown RBP14.72□□□□□ -0.05
GPNMB-203ENST00000409458 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP14.72□□□□□ -0.05
GPNMB-203ENST00000409458 STIM2Q9P246 746 aa14.72□□□□□ -0.05
GPNMB-203ENST00000409458 AMACRQ9UHK6 382 aa14.72□□□□□ -0.05
GPNMB-203ENST00000409458 MTUS1Q9ULD2 1270 aa14.72□□□□□ -0.05
GPNMB-203ENST00000409458 COL4A4P53420 1690 aaPredicted RBP14.72□□□□□ -0.05
GPNMB-203ENST00000409458 LRRD1A4D1F6 860 aa14.71□□□□□ -0.05
GPNMB-203ENST00000409458 ZSCAN5CA6NGD5 496 aaPredicted RBP14.71□□□□□ -0.05
GPNMB-203ENST00000409458 C3orf70A6NLC5 250 aaPredicted RBP14.71□□□□□ -0.05
GPNMB-203ENST00000409458 GLI1P08151 1106 aa14.71□□□□□ -0.05
GPNMB-203ENST00000409458 CYP2F1P24903 491 aa14.71□□□□□ -0.05
GPNMB-203ENST00000409458 HDAC4P56524 1084 aa14.71□□□□□ -0.05
GPNMB-203ENST00000409458 ELAVL2Q12926 359 aaKnown RBP14.71□□□□□ -0.05
GPNMB-203ENST00000409458 BRD3Q15059 726 aa14.71□□□□□ -0.05
GPNMB-203ENST00000409458 CYP1B1Q16678 543 aa14.71□□□□□ -0.05
GPNMB-203ENST00000409458 TTC27Q6P3X3 843 aa14.71□□□□□ -0.05
GPNMB-203ENST00000409458 BHLHA9Q7RTU4 235 aa14.71□□□□□ -0.05
GPNMB-203ENST00000409458 DCP1BQ8IZD4 617 aaKnown RBP14.71□□□□□ -0.05
GPNMB-203ENST00000409458 DEFB106AQ8N104 65 aa14.71□□□□□ -0.05
GPNMB-203ENST00000409458 HSPH1Q92598 858 aa14.71□□□□□ -0.05
GPNMB-203ENST00000409458 DDX23Q9BUQ8 820 aaKnown RBP14.71□□□□□ -0.05
GPNMB-203ENST00000409458 CNGB3Q9NQW8 809 aa14.71□□□□□ -0.05
GPNMB-203ENST00000409458 ABI2Q9NYB9 513 aaPredicted RBP14.71□□□□□ -0.05
GPNMB-203ENST00000409458 MYO16Q9Y6X6 1858 aa14.71□□□□□ -0.05
GPNMB-203ENST00000409458 KIAA1671Q9BY89 1806 aa14.71□□□□□ -0.05
GPNMB-203ENST00000409458 hCG_1818297A0A087WSY0 165 aa14.71□□□□□ -0.06
GPNMB-203ENST00000409458 CCDC151A5D8V7 595 aa14.71□□□□□ -0.06
GPNMB-203ENST00000409458 OR6C75A6NL08 312 aa14.71□□□□□ -0.06
GPNMB-203ENST00000409458 EFEMP2O95967 443 aa14.71□□□□□ -0.06
GPNMB-203ENST00000409458 CD48P09326 243 aa14.71□□□□□ -0.06
GPNMB-203ENST00000409458 USP17L7P0C7H9 530 aa14.71□□□□□ -0.06
GPNMB-203ENST00000409458 KRT10P13645 584 aa14.71□□□□□ -0.06
GPNMB-203ENST00000409458 PTPN7P35236 360 aa14.71□□□□□ -0.06
GPNMB-203ENST00000409458 MATKP42679 507 aa14.71□□□□□ -0.06
GPNMB-203ENST00000409458 CDKN2BP42772 138 aa14.71□□□□□ -0.06
GPNMB-203ENST00000409458 ATXN1P54253 815 aaKnown RBP14.71□□□□□ -0.06
GPNMB-203ENST00000409458 ADCY2Q08462 1091 aa14.71□□□□□ -0.06
GPNMB-203ENST00000409458 ODF2Q5BJF6 829 aa14.71□□□□□ -0.06
GPNMB-203ENST00000409458 OTUD1Q5VV17 481 aaPredicted RBP14.71□□□□□ -0.06
GPNMB-203ENST00000409458 KAZNQ674X7 775 aa14.71□□□□□ -0.06
GPNMB-203ENST00000409458 GSPT2Q8IYD1 628 aaKnown RBP14.71□□□□□ -0.06
GPNMB-203ENST00000409458 C12orf50Q8NA57 414 aaPredicted RBP14.71□□□□□ -0.06
GPNMB-203ENST00000409458 RUBCNQ92622 972 aa14.71□□□□□ -0.06
GPNMB-203ENST00000409458 CENPIQ92674 756 aaPredicted RBP14.71□□□□□ -0.06
GPNMB-203ENST00000409458 MAGOHBQ96A72 148 aaKnown RBP14.71□□□□□ -0.06
GPNMB-203ENST00000409458 SLC2A13Q96QE2 648 aa14.71□□□□□ -0.06
GPNMB-203ENST00000409458 TBCBQ99426 244 aa14.71□□□□□ -0.06
GPNMB-203ENST00000409458 VN1R3Q9BXE9 311 aa14.71□□□□□ -0.06
GPNMB-203ENST00000409458 PNPLA8Q9NP80 782 aa14.71□□□□□ -0.06
GPNMB-203ENST00000409458 CALCOCO1Q9P1Z2 691 aa14.71□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms