RNA–Protein interactions for RNA: ENST00000409101.7

SCN3A-203, Transcript of sodium voltage-gated channel alpha subunit 3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SCN3A, Length 6,599 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3A-203ENST00000409101 ABCC13Q9NSE7 274 aa5.2□□□□□ -1.58
SCN3A-203ENST00000409101 PSD3Q9NYI0 1048 aa5.2□□□□□ -1.58
SCN3A-203ENST00000409101 PKD2L2Q9NZM6 624 aa5.2□□□□□ -1.58
SCN3A-203ENST00000409101 C6orf203Q9P0P8 240 aaPredicted RBP5.2□□□□□ -1.58
SCN3A-203ENST00000409101 NIPSNAP3AQ9UFN0 247 aaPredicted RBP5.2□□□□□ -1.58
SCN3A-203ENST00000409101 TPX2Q9ULW0 747 aaKnown RBP5.2□□□□□ -1.58
SCN3A-203ENST00000409101 ZNF536O15090 1300 aa5.2□□□□□ -1.58
SCN3A-203ENST00000409101 RASA4BC9J798 803 aa5.2□□□□□ -1.58
SCN3A-203ENST00000409101 ATMINO43313 823 aaPredicted RBP5.2□□□□□ -1.58
SCN3A-203ENST00000409101 RASA4O43374 803 aa5.2□□□□□ -1.58
SCN3A-203ENST00000409101 RAMP2O60895 175 aa5.2□□□□□ -1.58
SCN3A-203ENST00000409101 SPATA31D3P0C874 917 aa5.2□□□□□ -1.58
SCN3A-203ENST00000409101 CCDC130P13994 396 aa5.2□□□□□ -1.58
SCN3A-203ENST00000409101 CASP4P49662 377 aa5.2□□□□□ -1.58
SCN3A-203ENST00000409101 BYSLQ13895 437 aaKnown RBP5.2□□□□□ -1.58
SCN3A-203ENST00000409101 DHX34Q14147 1143 aaKnown RBP5.2□□□□□ -1.58
SCN3A-203ENST00000409101 SPARCL1Q14515 664 aa5.2□□□□□ -1.58
SCN3A-203ENST00000409101 RARS2Q5T160 578 aaKnown RBP5.2□□□□□ -1.58
SCN3A-203ENST00000409101 SPATA31D4Q6ZUB0 917 aa5.2□□□□□ -1.58
SCN3A-203ENST00000409101 CREBZFQ9NS37 354 aa5.2□□□□□ -1.58
SCN3A-203ENST00000409101 INTS13Q9NVM9 706 aa5.2□□□□□ -1.58
SCN3A-203ENST00000409101 SRRDQ9UH36 339 aa5.2□□□□□ -1.58
SCN3A-203ENST00000409101 NDOR1Q9UHB4 597 aa5.2□□□□□ -1.58
SCN3A-203ENST00000409101 CDH9Q9ULB4 789 aa5.2□□□□□ -1.58
SCN3A-203ENST00000409101 MRFAP1Q9Y605 127 aa5.2□□□□□ -1.58
SCN3A-203ENST00000409101 PARP4Q9UKK3 1724 aaKnown RBP5.2□□□□□ -1.58
SCN3A-203ENST00000409101 KANSL1LA0AUZ9 987 aa5.2□□□□□ -1.58
SCN3A-203ENST00000409101 OR6C75A6NL08 312 aa5.2□□□□□ -1.58
SCN3A-203ENST00000409101 NFKBIEO00221 500 aa5.2□□□□□ -1.58
SCN3A-203ENST00000409101 KPNA3O00505 521 aaPredicted RBP5.2□□□□□ -1.58
SCN3A-203ENST00000409101 NDUFB5O43674 189 aa5.2□□□□□ -1.58
SCN3A-203ENST00000409101 SGPL1O95470 568 aa5.2□□□□□ -1.58
SCN3A-203ENST00000409101 INPP1P49441 399 aa5.2□□□□□ -1.58
SCN3A-203ENST00000409101 NUMBP49757 651 aa5.2□□□□□ -1.58
SCN3A-203ENST00000409101 RARRES1P49788 294 aa5.2□□□□□ -1.58
SCN3A-203ENST00000409101 SCNN1BP51168 640 aa5.2□□□□□ -1.58
SCN3A-203ENST00000409101 SLC18A3Q16572 532 aa5.2□□□□□ -1.58
SCN3A-203ENST00000409101 AAK1Q2M2I8 961 aa5.2□□□□□ -1.58
SCN3A-203ENST00000409101 MRNIPQ6NTE8 343 aa5.2□□□□□ -1.58
SCN3A-203ENST00000409101 SARM1Q6SZW1 724 aa5.2□□□□□ -1.58
SCN3A-203ENST00000409101 DENND5BQ6ZUT9 1274 aa5.2□□□□□ -1.58
SCN3A-203ENST00000409101 EPM2AIP1Q7L775 607 aaPredicted RBP5.2□□□□□ -1.58
SCN3A-203ENST00000409101 ABRAQ8N0Z2 381 aa5.2□□□□□ -1.58
SCN3A-203ENST00000409101 CYP2W1Q8TAV3 490 aa5.2□□□□□ -1.58
SCN3A-203ENST00000409101 MAF1Q9H063 256 aa5.2□□□□□ -1.58
SCN3A-203ENST00000409101 NT5MQ9NPB1 228 aa5.2□□□□□ -1.58
SCN3A-203ENST00000409101 RAD18Q9NS91 495 aa5.2□□□□□ -1.58
SCN3A-203ENST00000409101 FGFR1OP2Q9NVK5 253 aa5.2□□□□□ -1.58
SCN3A-203ENST00000409101 NMRK1Q9NWW6 199 aa5.2□□□□□ -1.58
SCN3A-203ENST00000409101 ZC3H7BQ9UGR2 993 aaKnown RBP5.2□□□□□ -1.58
SCN3A-203ENST00000409101 PACSIN2Q9UNF0 486 aaPredicted RBP5.2□□□□□ -1.58
SCN3A-203ENST00000409101 AP4E1Q9UPM8 1137 aa5.2□□□□□ -1.58
SCN3A-203ENST00000409101 TNFSF13BQ9Y275 285 aa5.2□□□□□ -1.58
SCN3A-203ENST00000409101 COL3A1P02461 1466 aaPredicted RBP5.2□□□□□ -1.58
SCN3A-203ENST00000409101 LOC102724159A0A0B4J2E5 919 aa5.2□□□□□ -1.58
SCN3A-203ENST00000409101 PDZK1P1A8MUH7 402 aa5.2□□□□□ -1.58
SCN3A-203ENST00000409101 PALM2-AKAP2B1ALY0 433 aaPredicted RBP5.2□□□□□ -1.58
SCN3A-203ENST00000409101 MICAL2O94851 1124 aa5.2□□□□□ -1.58
SCN3A-203ENST00000409101 KITP10721 976 aa5.2□□□□□ -1.58
SCN3A-203ENST00000409101 ALOX15P16050 662 aaPredicted RBP5.2□□□□□ -1.58
SCN3A-203ENST00000409101 GCKP35557 465 aa5.2□□□□□ -1.58
SCN3A-203ENST00000409101 TUBP50607 506 aa5.2□□□□□ -1.58
SCN3A-203ENST00000409101 MKRN4PQ13434 485 aaPredicted RBP5.2□□□□□ -1.58
SCN3A-203ENST00000409101 GPM6BQ13491 265 aa5.2□□□□□ -1.58
SCN3A-203ENST00000409101 EFTUD2Q15029 972 aaKnown RBP eCLIP5.2□□□□□ -1.58
SCN3A-203ENST00000409101 PWP2Q15269 919 aaKnown RBP5.2□□□□□ -1.58
SCN3A-203ENST00000409101 COBLL1Q53SF7 1204 aa5.2□□□□□ -1.58
SCN3A-203ENST00000409101 FAM46CQ5VWP2 391 aa5.2□□□□□ -1.58
SCN3A-203ENST00000409101 TATDN1Q6P1N9 297 aa5.2□□□□□ -1.58
SCN3A-203ENST00000409101 SERPINA13PQ6UXR4 307 aa5.2□□□□□ -1.58
SCN3A-203ENST00000409101 NPAS4Q8IUM7 802 aa5.2□□□□□ -1.58
SCN3A-203ENST00000409101 MYO1HQ8N1T3 1032 aa5.2□□□□□ -1.58
SCN3A-203ENST00000409101 SLC2A14Q8TDB8 520 aa5.2□□□□□ -1.58
SCN3A-203ENST00000409101 TRIM55Q9BYV6 548 aa5.2□□□□□ -1.58
SCN3A-203ENST00000409101 SLC13A1Q9BZW2 595 aa5.2□□□□□ -1.58
SCN3A-203ENST00000409101 UPF3AQ9H1J1 476 aaKnown RBP5.2□□□□□ -1.58
SCN3A-203ENST00000409101 GOLPH3Q9H4A6 298 aa5.2□□□□□ -1.58
SCN3A-203ENST00000409101 TBC1D13Q9NVG8 400 aa5.2□□□□□ -1.58
SCN3A-203ENST00000409101 TEKT2Q9UIF3 430 aa5.2□□□□□ -1.58
SCN3A-203ENST00000409101 ABCC6O95255 1503 aa5.2□□□□□ -1.58
SCN3A-203ENST00000409101 ZNF839A8K0R7 811 aa5.2□□□□□ -1.58
SCN3A-203ENST00000409101 PIK3CDO00329 1044 aa5.2□□□□□ -1.58
SCN3A-203ENST00000409101 FOXP2O15409 715 aa5.2□□□□□ -1.58
SCN3A-203ENST00000409101 MEFVO15553 781 aaPredicted RBP5.2□□□□□ -1.58
SCN3A-203ENST00000409101 PSTPIP1O43586 416 aa5.2□□□□□ -1.58
SCN3A-203ENST00000409101 CTDNEP1O95476 244 aa5.2□□□□□ -1.58
SCN3A-203ENST00000409101 TMEM253P0C7T8 217 aa5.2□□□□□ -1.58
SCN3A-203ENST00000409101 POLR2LP62875 67 aaKnown RBP5.2□□□□□ -1.58
SCN3A-203ENST00000409101 NAB2Q15742 525 aa5.2□□□□□ -1.58
SCN3A-203ENST00000409101 NUGGCQ68CJ6 796 aa5.2□□□□□ -1.58
SCN3A-203ENST00000409101 BRSK2Q8IWQ3 736 aa5.2□□□□□ -1.58
SCN3A-203ENST00000409101 CCDC197Q8NCU1 140 aa5.2□□□□□ -1.58
SCN3A-203ENST00000409101 C18orf25Q96B23 403 aaPredicted RBP5.2□□□□□ -1.58
SCN3A-203ENST00000409101 OSBPL9Q96SU4 736 aa5.2□□□□□ -1.58
SCN3A-203ENST00000409101 FICDQ9BVA6 458 aa5.2□□□□□ -1.58
SCN3A-203ENST00000409101 FRMD8P1Q9BZ68 369 aaPredicted RBP5.2□□□□□ -1.58
SCN3A-203ENST00000409101 CLPBQ9H078 707 aa5.2□□□□□ -1.58
SCN3A-203ENST00000409101 MED4Q9NPJ6 270 aa5.2□□□□□ -1.58
SCN3A-203ENST00000409101 KIF17Q9P2E2 1029 aa5.2□□□□□ -1.58
SCN3A-203ENST00000409101 TSPAN16Q9UKR8 245 aa5.2□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms