RNA–Protein interactions for RNA: ENST00000406327.2

HMGB3P18-201, Transcript of high mobility group box 3 pseudogene 18, humanhuman

BASIC

Gene HMGB3P18, Length 590 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P18-201ENST00000406327 UBE3AQ05086 875 aa5.42□□□□□ -1.54
HMGB3P18-201ENST00000406327 G3BP1Q13283 466 aaKnown RBP eCLIP5.42□□□□□ -1.54
HMGB3P18-201ENST00000406327 CRHR2Q13324 411 aa5.42□□□□□ -1.54
HMGB3P18-201ENST00000406327 SIM2Q14190 667 aaPredicted RBP5.42□□□□□ -1.54
HMGB3P18-201ENST00000406327 ZIK1Q3SY52 487 aaPredicted RBP5.42□□□□□ -1.54
HMGB3P18-201ENST00000406327 TRIM60Q495X7 471 aa5.42□□□□□ -1.54
HMGB3P18-201ENST00000406327 METRNLQ641Q3 311 aa5.42□□□□□ -1.54
HMGB3P18-201ENST00000406327 TMPRSS9Q7Z410 1059 aa5.42□□□□□ -1.54
HMGB3P18-201ENST00000406327 TMEM57Q8N5G2 664 aa5.42□□□□□ -1.54
HMGB3P18-201ENST00000406327 ESX1Q8N693 406 aa5.42□□□□□ -1.54
HMGB3P18-201ENST00000406327 ZNF483Q8TF39 744 aaPredicted RBP5.42□□□□□ -1.54
HMGB3P18-201ENST00000406327 BRD8Q9H0E9 1235 aa5.42□□□□□ -1.54
HMGB3P18-201ENST00000406327 SMOC2Q9H3U7 446 aa5.42□□□□□ -1.54
HMGB3P18-201ENST00000406327 ELAC1Q9H777 363 aaKnown RBP5.42□□□□□ -1.54
HMGB3P18-201ENST00000406327 JMJD4Q9H9V9 463 aa5.42□□□□□ -1.54
HMGB3P18-201ENST00000406327 NOD2Q9HC29 1040 aa5.42□□□□□ -1.54
HMGB3P18-201ENST00000406327 UBN1Q9NPG3 1134 aa5.42□□□□□ -1.54
HMGB3P18-201ENST00000406327 TRIM36Q9NQ86 728 aa5.42□□□□□ -1.54
HMGB3P18-201ENST00000406327 PPP4R1LQ9P1A2 415 aa5.42□□□□□ -1.54
HMGB3P18-201ENST00000406327 PI4KBQ9UBF8 816 aa5.42□□□□□ -1.54
HMGB3P18-201ENST00000406327 LPAR3Q9UBY5 353 aa5.42□□□□□ -1.54
HMGB3P18-201ENST00000406327 VPS51Q9UID3 782 aa5.42□□□□□ -1.54
HMGB3P18-201ENST00000406327 FEM1BQ9UK73 627 aa5.42□□□□□ -1.54
HMGB3P18-201ENST00000406327 USP22Q9UPT9 525 aa5.42□□□□□ -1.54
HMGB3P18-201ENST00000406327 NOX1Q9Y5S8 564 aa5.42□□□□□ -1.54
HMGB3P18-201ENST00000406327 H0Y3Z8 333 aa5.41□□□□□ -1.54
HMGB3P18-201ENST00000406327 hCG_1984214I3L0E3 225 aa5.41□□□□□ -1.54
HMGB3P18-201ENST00000406327 J3KTA2 159 aa5.41□□□□□ -1.54
HMGB3P18-201ENST00000406327 RPS6KA4O75676 772 aa5.41□□□□□ -1.54
HMGB3P18-201ENST00000406327 MBD4O95243 580 aa5.41□□□□□ -1.54
HMGB3P18-201ENST00000406327 LARGE1O95461 756 aa5.41□□□□□ -1.54
HMGB3P18-201ENST00000406327 PRKCBP05771 671 aa5.41□□□□□ -1.54
HMGB3P18-201ENST00000406327 ARP10275 920 aa5.41□□□□□ -1.54
HMGB3P18-201ENST00000406327 BDNFP23560 247 aa5.41□□□□□ -1.54
HMGB3P18-201ENST00000406327 CNTFP26441 200 aa5.41□□□□□ -1.54
HMGB3P18-201ENST00000406327 GATMP50440 423 aa5.41□□□□□ -1.54
HMGB3P18-201ENST00000406327 ADAM17P78536 824 aa5.41□□□□□ -1.54
HMGB3P18-201ENST00000406327 TIAL1Q01085 375 aaKnown RBP eCLIP5.41□□□□□ -1.54
HMGB3P18-201ENST00000406327 RPS6KA2Q15349 733 aa5.41□□□□□ -1.54
HMGB3P18-201ENST00000406327 RBM20Q5T481 1227 aaKnown RBP5.41□□□□□ -1.54
HMGB3P18-201ENST00000406327 TEDDM1Q5T9Z0 273 aa5.41□□□□□ -1.54
HMGB3P18-201ENST00000406327 C1QL3Q5VWW1 255 aa5.41□□□□□ -1.54
HMGB3P18-201ENST00000406327 HERC6Q8IVU3 1022 aa5.41□□□□□ -1.54
HMGB3P18-201ENST00000406327 ADGRG5Q8IZF4 528 aa5.41□□□□□ -1.54
HMGB3P18-201ENST00000406327 FSTL5Q8N475 847 aaPredicted RBP5.41□□□□□ -1.54
HMGB3P18-201ENST00000406327 OSCP1Q8WVF1 389 aa5.41□□□□□ -1.54
HMGB3P18-201ENST00000406327 ATRIPQ8WXE1 791 aa5.41□□□□□ -1.54
HMGB3P18-201ENST00000406327 HERVK_113Q902F9 699 aa5.41□□□□□ -1.54
HMGB3P18-201ENST00000406327 C3orf49Q96BT1 292 aa5.41□□□□□ -1.54
HMGB3P18-201ENST00000406327 NEU1Q99519 415 aa5.41□□□□□ -1.54
HMGB3P18-201ENST00000406327 ZSWIM1Q9BR11 485 aa5.41□□□□□ -1.54
HMGB3P18-201ENST00000406327 TWSG1Q9GZX9 223 aa5.41□□□□□ -1.54
HMGB3P18-201ENST00000406327 SERHL2Q9H4I8 314 aa5.41□□□□□ -1.54
HMGB3P18-201ENST00000406327 EPS8L2Q9H6S3 715 aa5.41□□□□□ -1.54
HMGB3P18-201ENST00000406327 GBA2Q9HCG7 927 aaPredicted RBP5.41□□□□□ -1.54
HMGB3P18-201ENST00000406327 AURKAIP1Q9NWT8 199 aaPredicted RBP5.41□□□□□ -1.54
HMGB3P18-201ENST00000406327 TRPM5Q9NZQ8 1165 aa5.41□□□□□ -1.54
HMGB3P18-201ENST00000406327 MRPS17Q9Y2R5 130 aaKnown RBP5.41□□□□□ -1.54
HMGB3P18-201ENST00000406327 CHST2Q9Y4C5 530 aa5.41□□□□□ -1.54
HMGB3P18-201ENST00000406327 AATKQ6ZMQ8 1374 aa5.41□□□□□ -1.54
HMGB3P18-201ENST00000406327 CEP162Q5TB80 1403 aa5.4□□□□□ -1.54
HMGB3P18-201ENST00000406327 EYA2O00167 538 aa5.4□□□□□ -1.54
HMGB3P18-201ENST00000406327 FOXS1O43638 330 aa5.4□□□□□ -1.54
HMGB3P18-201ENST00000406327 RHOBTB3O94955 611 aa5.4□□□□□ -1.54
HMGB3P18-201ENST00000406327 CFIP05156 583 aa5.4□□□□□ -1.54
HMGB3P18-201ENST00000406327 POLBP06746 335 aa5.4□□□□□ -1.54
HMGB3P18-201ENST00000406327 CKMT1AP12532 417 aa5.4□□□□□ -1.54
HMGB3P18-201ENST00000406327 GYS1P13807 737 aa5.4□□□□□ -1.54
HMGB3P18-201ENST00000406327 TNFAIP3P21580 790 aa5.4□□□□□ -1.54
HMGB3P18-201ENST00000406327 UQCRC1P31930 480 aa5.4□□□□□ -1.54
HMGB3P18-201ENST00000406327 PNLIPRP1P54315 467 aa5.4□□□□□ -1.54
HMGB3P18-201ENST00000406327 CXADRP78310 365 aa5.4□□□□□ -1.54
HMGB3P18-201ENST00000406327 MC2RQ01718 297 aa5.4□□□□□ -1.54
HMGB3P18-201ENST00000406327 CUL4BQ13620 913 aa5.4□□□□□ -1.54
HMGB3P18-201ENST00000406327 ANKRD1Q15327 319 aa5.4□□□□□ -1.54
HMGB3P18-201ENST00000406327 PDCD4Q53EL6 469 aaKnown RBP5.4□□□□□ -1.54
HMGB3P18-201ENST00000406327 L1TD1Q5T7N2 865 aaKnown RBP5.4□□□□□ -1.54
HMGB3P18-201ENST00000406327 TTC22Q5TAA0 569 aa5.4□□□□□ -1.54
HMGB3P18-201ENST00000406327 SP5Q6BEB4 398 aaPredicted RBP5.4□□□□□ -1.54
HMGB3P18-201ENST00000406327 TICAM2Q86XR7 235 aa5.4□□□□□ -1.54
HMGB3P18-201ENST00000406327 RAB11FIP4Q86YS3 637 aa5.4□□□□□ -1.54
HMGB3P18-201ENST00000406327 TMTC1Q8IUR5 882 aa5.4□□□□□ -1.54
HMGB3P18-201ENST00000406327 SYNE4Q8N205 404 aa5.4□□□□□ -1.54
HMGB3P18-201ENST00000406327 USP38Q8NB14 1042 aa5.4□□□□□ -1.54
HMGB3P18-201ENST00000406327 PCYOX1LQ8NBM8 494 aa5.4□□□□□ -1.54
HMGB3P18-201ENST00000406327 SCAMP5Q8TAC9 235 aa5.4□□□□□ -1.54
HMGB3P18-201ENST00000406327 CPT1CQ8TCG5 803 aa5.4□□□□□ -1.54
HMGB3P18-201ENST00000406327 ASB12Q8WXK4 309 aa5.4□□□□□ -1.54
HMGB3P18-201ENST00000406327 HDAC2Q92769 488 aaKnown RBP5.4□□□□□ -1.54
HMGB3P18-201ENST00000406327 GOLGA1Q92805 767 aa5.4□□□□□ -1.54
HMGB3P18-201ENST00000406327 TMEM125Q96AQ2 219 aa5.4□□□□□ -1.54
HMGB3P18-201ENST00000406327 FAM136AQ96C01 138 aa5.4□□□□□ -1.54
HMGB3P18-201ENST00000406327 BOD1Q96IK1 185 aa5.4□□□□□ -1.54
HMGB3P18-201ENST00000406327 LRIG1Q96JA1 1093 aa5.4□□□□□ -1.54
HMGB3P18-201ENST00000406327 MAELQ96JY0 434 aaKnown RBP5.4□□□□□ -1.54
HMGB3P18-201ENST00000406327 VN1R3Q9BXE9 311 aa5.4□□□□□ -1.54
HMGB3P18-201ENST00000406327 TMX4Q9H1E5 349 aaPredicted RBP5.4□□□□□ -1.54
HMGB3P18-201ENST00000406327 GALNT9Q9HCQ5 603 aa5.4□□□□□ -1.54
HMGB3P18-201ENST00000406327 G6PC2Q9NQR9 355 aa5.4□□□□□ -1.54
HMGB3P18-201ENST00000406327 INTS13Q9NVM9 706 aa5.4□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms