RNA–Protein interactions for RNA: ENST00000401473.7

HMGA1-204, Transcript of high mobility group AT-hook 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HMGA1, Length 1,887 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1-204ENST00000401473 KCNQ1P51787 676 aa16.79■□□□□ 0.28
HMGA1-204ENST00000401473 EPHA5P54756 1037 aa16.79■□□□□ 0.28
HMGA1-204ENST00000401473 CDK17Q00537 523 aa16.79■□□□□ 0.28
HMGA1-204ENST00000401473 ADIGQ0VDE8 80 aa16.79■□□□□ 0.28
HMGA1-204ENST00000401473 PM20D1Q6GTS8 502 aa16.79■□□□□ 0.28
HMGA1-204ENST00000401473 ELMOD1Q8N336 334 aa16.79■□□□□ 0.28
HMGA1-204ENST00000401473 CLEC4CQ8WTT0 213 aa16.79■□□□□ 0.28
HMGA1-204ENST00000401473 LRRC4Q9HBW1 653 aa16.79■□□□□ 0.28
HMGA1-204ENST00000401473 ZNHIT6Q9NWK9 470 aaKnown RBP16.79■□□□□ 0.28
HMGA1-204ENST00000401473 USP15Q9Y4E8 981 aaPredicted RBP16.79■□□□□ 0.28
HMGA1-204ENST00000401473 CEP83Q9Y592 693 aa16.79■□□□□ 0.28
HMGA1-204ENST00000401473 TADA3O75528 432 aa16.78■□□□□ 0.28
HMGA1-204ENST00000401473 RTN3O95197 1032 aaPredicted RBP16.78■□□□□ 0.28
HMGA1-204ENST00000401473 GJA1P17302 382 aa16.78■□□□□ 0.28
HMGA1-204ENST00000401473 CENPCQ03188 943 aa16.78■□□□□ 0.28
HMGA1-204ENST00000401473 MAPK8IP2Q13387 824 aaPredicted RBP16.78■□□□□ 0.28
HMGA1-204ENST00000401473 TAF12Q16514 161 aa16.78■□□□□ 0.28
HMGA1-204ENST00000401473 ATAT1Q5SQI0 421 aa16.78■□□□□ 0.28
HMGA1-204ENST00000401473 CES5AQ6NT32 575 aa16.78■□□□□ 0.28
HMGA1-204ENST00000401473 TRIM72Q6ZMU5 477 aa16.78■□□□□ 0.28
HMGA1-204ENST00000401473 BHLHA9Q7RTU4 235 aa16.78■□□□□ 0.28
HMGA1-204ENST00000401473 SUSD6Q92537 303 aa16.78■□□□□ 0.28
HMGA1-204ENST00000401473 PDLIM2Q96JY6 352 aa16.78■□□□□ 0.28
HMGA1-204ENST00000401473 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP16.78■□□□□ 0.28
HMGA1-204ENST00000401473 ULBP1Q9BZM6 244 aa16.78■□□□□ 0.28
HMGA1-204ENST00000401473 NHEJ1Q9H9Q4 299 aaPredicted RBP16.78■□□□□ 0.28
HMGA1-204ENST00000401473 THEGQ9P2T0 379 aa16.78■□□□□ 0.28
HMGA1-204ENST00000401473 OBSL1O75147 1896 aa16.78■□□□□ 0.28
HMGA1-204ENST00000401473 SSU72P8A0A1W2PR75 194 aa16.78■□□□□ 0.28
HMGA1-204ENST00000401473 TMCO5BA8MYB1 307 aa16.78■□□□□ 0.28
HMGA1-204ENST00000401473 PAPSS1O43252 624 aaPredicted RBP16.78■□□□□ 0.28
HMGA1-204ENST00000401473 MBTPS2O43462 519 aa16.78■□□□□ 0.28
HMGA1-204ENST00000401473 ERBB2P04626 1255 aa16.78■□□□□ 0.28
HMGA1-204ENST00000401473 MYL4P12829 197 aa16.78■□□□□ 0.28
HMGA1-204ENST00000401473 FECHP22830 423 aa16.78■□□□□ 0.28
HMGA1-204ENST00000401473 MMP8P22894 467 aa16.78■□□□□ 0.28
HMGA1-204ENST00000401473 GABRR2P28476 465 aa16.78■□□□□ 0.28
HMGA1-204ENST00000401473 PTP4A2Q12974 167 aa16.78■□□□□ 0.28
HMGA1-204ENST00000401473 PABPC1LQ4VXU2 614 aaKnown RBP16.78■□□□□ 0.28
HMGA1-204ENST00000401473 PRSS36Q5K4E3 855 aa16.78■□□□□ 0.28
HMGA1-204ENST00000401473 CYP26C1Q6V0L0 522 aa16.78■□□□□ 0.28
HMGA1-204ENST00000401473 ERICH1Q86X53 443 aa16.78■□□□□ 0.28
HMGA1-204ENST00000401473 TMEM139Q8IV31 216 aa16.78■□□□□ 0.28
HMGA1-204ENST00000401473 PIWIL1Q96J94 861 aaKnown RBP16.78■□□□□ 0.28
HMGA1-204ENST00000401473 MIS12Q9H081 205 aa16.78■□□□□ 0.28
HMGA1-204ENST00000401473 FBXO44Q9H4M3 255 aa16.78■□□□□ 0.28
HMGA1-204ENST00000401473 WDR6Q9NNW5 1121 aaKnown RBP16.78■□□□□ 0.28
HMGA1-204ENST00000401473 ASAH2Q9NR71 780 aa16.78■□□□□ 0.28
HMGA1-204ENST00000401473 OSER1Q9NX31 292 aa16.78■□□□□ 0.28
HMGA1-204ENST00000401473 SCML2Q9UQR0 700 aa16.78■□□□□ 0.28
HMGA1-204ENST00000401473 A0A1W2PRU2 124 aa16.77■□□□□ 0.27
HMGA1-204ENST00000401473 ZBED1O96006 694 aa16.77■□□□□ 0.27
HMGA1-204ENST00000401473 GABRB2P47870 512 aa16.77■□□□□ 0.27
HMGA1-204ENST00000401473 GFPT1Q06210 699 aaPredicted RBP16.77■□□□□ 0.27
HMGA1-204ENST00000401473 CYP4A22Q5TCH4 519 aa16.77■□□□□ 0.27
HMGA1-204ENST00000401473 ACAD10Q6JQN1 1059 aa16.77■□□□□ 0.27
HMGA1-204ENST00000401473 SCD5Q86SK9 330 aa16.77■□□□□ 0.27
HMGA1-204ENST00000401473 ITFG1Q8TB96 612 aa16.77■□□□□ 0.27
HMGA1-204ENST00000401473 NMUR1Q9HB89 426 aa16.77■□□□□ 0.27
HMGA1-204ENST00000401473 CYLDQ9NQC7 956 aa16.77■□□□□ 0.27
HMGA1-204ENST00000401473 YJEFN3A6XGL0 299 aa16.76■□□□□ 0.27
HMGA1-204ENST00000401473 E7ENQ6 273 aa16.76■□□□□ 0.27
HMGA1-204ENST00000401473 GZMAP12544 262 aa16.76■□□□□ 0.27
HMGA1-204ENST00000401473 ACADSBP45954 432 aa16.76■□□□□ 0.27
HMGA1-204ENST00000401473 SMAD4Q13485 552 aaKnown RBP16.76■□□□□ 0.27
HMGA1-204ENST00000401473 CBX2Q14781 532 aaPredicted RBP16.76■□□□□ 0.27
HMGA1-204ENST00000401473 PTCRAQ6ISU1 281 aaPredicted RBP16.76■□□□□ 0.27
HMGA1-204ENST00000401473 PDZD4Q76G19 769 aaPredicted RBP16.76■□□□□ 0.27
HMGA1-204ENST00000401473 FBXO32Q969P5 355 aa16.76■□□□□ 0.27
HMGA1-204ENST00000401473 TTC28Q96AY4 2481 aa16.76■□□□□ 0.27
HMGA1-204ENST00000401473 C18orf8Q96DM3 657 aa16.76■□□□□ 0.27
HMGA1-204ENST00000401473 POMKQ9H5K3 350 aa16.76■□□□□ 0.27
HMGA1-204ENST00000401473 AVENQ9NQS1 362 aaPredicted RBP16.76■□□□□ 0.27
HMGA1-204ENST00000401473 CNGB3Q9NQW8 809 aa16.76■□□□□ 0.27
HMGA1-204ENST00000401473 COMMD8Q9NX08 183 aa16.76■□□□□ 0.27
HMGA1-204ENST00000401473 GMIPQ9P107 970 aa16.76■□□□□ 0.27
HMGA1-204ENST00000401473 NAGPAQ9UK23 515 aa16.76■□□□□ 0.27
HMGA1-204ENST00000401473 MYO16Q9Y6X6 1858 aa16.76■□□□□ 0.27
HMGA1-204ENST00000401473 MYO10Q9HD67 2058 aa16.76■□□□□ 0.27
HMGA1-204ENST00000401473 ZNF840PA6NDX5 716 aa16.76■□□□□ 0.27
HMGA1-204ENST00000401473 ZNF263O14978 683 aa16.76■□□□□ 0.27
HMGA1-204ENST00000401473 FTLP02792 175 aaPredicted RBP16.76■□□□□ 0.27
HMGA1-204ENST00000401473 ZDHHC11BP0C7U3 371 aa16.76■□□□□ 0.27
HMGA1-204ENST00000401473 DAOAP59103 153 aa16.76■□□□□ 0.27
HMGA1-204ENST00000401473 TAF5Q15542 800 aa16.76■□□□□ 0.27
HMGA1-204ENST00000401473 SLC18A3Q16572 532 aa16.76■□□□□ 0.27
HMGA1-204ENST00000401473 STXBP5Q5T5C0 1151 aa16.76■□□□□ 0.27
HMGA1-204ENST00000401473 MMS22LQ6ZRQ5 1243 aa16.76■□□□□ 0.27
HMGA1-204ENST00000401473 HFE2Q6ZVN8 426 aa16.76■□□□□ 0.27
HMGA1-204ENST00000401473 PHLDB2Q86SQ0 1253 aa16.76■□□□□ 0.27
HMGA1-204ENST00000401473 PHF13Q86YI8 300 aaPredicted RBP16.76■□□□□ 0.27
HMGA1-204ENST00000401473 SIX6OS1Q8N1H7 587 aa16.76■□□□□ 0.27
HMGA1-204ENST00000401473 SHKBP1Q8TBC3 707 aa16.76■□□□□ 0.27
HMGA1-204ENST00000401473 KHSRPQ92945 711 aaKnown RBP eCLIP16.76■□□□□ 0.27
HMGA1-204ENST00000401473 CCDC42Q96M95 316 aa16.76■□□□□ 0.27
HMGA1-204ENST00000401473 NOX5Q96PH1 765 aa16.76■□□□□ 0.27
HMGA1-204ENST00000401473 SLITRK1Q96PX8 696 aa16.76■□□□□ 0.27
HMGA1-204ENST00000401473 ISCUQ9H1K1 167 aa16.76■□□□□ 0.27
HMGA1-204ENST00000401473 SPTLC3Q9NUV7 552 aa16.76■□□□□ 0.27
HMGA1-204ENST00000401473 UXTQ9UBK9 157 aaPredicted RBP16.76■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms