RNA–Protein interactions for RNA: ENST00000399976.6

USP16-204, Transcript of ubiquitin specific peptidase 16, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene USP16, Length 2,963 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP16-204ENST00000399976 KMT2EQ8IZD2 1858 aa7.92□□□□□ -1.14
USP16-204ENST00000399976 F8VP50 259 aa7.92□□□□□ -1.14
USP16-204ENST00000399976 IGLV3-25P01717 112 aa7.92□□□□□ -1.14
USP16-204ENST00000399976 IGLV3-27P01718 113 aa7.92□□□□□ -1.14
USP16-204ENST00000399976 LAMP2P13473 410 aa7.92□□□□□ -1.14
USP16-204ENST00000399976 AIF1P55008 147 aa7.92□□□□□ -1.14
USP16-204ENST00000399976 FMO1Q01740 532 aa7.92□□□□□ -1.14
USP16-204ENST00000399976 PDE4CQ08493 712 aa7.92□□□□□ -1.14
USP16-204ENST00000399976 CLEC16AQ2KHT3 1053 aa7.92□□□□□ -1.14
USP16-204ENST00000399976 LLGL2Q6P1M3 1020 aa7.92□□□□□ -1.14
USP16-204ENST00000399976 RBM23Q86U06 439 aaKnown RBP7.92□□□□□ -1.14
USP16-204ENST00000399976 PIGZQ86VD9 579 aa7.92□□□□□ -1.14
USP16-204ENST00000399976 VPS36Q86VN1 386 aa7.92□□□□□ -1.14
USP16-204ENST00000399976 SUGP1Q8IWZ8 645 aaKnown RBP7.92□□□□□ -1.14
USP16-204ENST00000399976 SMARCD2Q92925 531 aa7.92□□□□□ -1.14
USP16-204ENST00000399976 SECISBP2LQ93073 1101 aaKnown RBP7.92□□□□□ -1.14
USP16-204ENST00000399976 NT5C3BQ969T7 300 aa7.92□□□□□ -1.14
USP16-204ENST00000399976 PLD4Q96BZ4 506 aa7.92□□□□□ -1.14
USP16-204ENST00000399976 MCRS1Q96EZ8 462 aa7.92□□□□□ -1.14
USP16-204ENST00000399976 ASB16Q96NS5 453 aa7.92□□□□□ -1.14
USP16-204ENST00000399976 ISCUQ9H1K1 167 aa7.92□□□□□ -1.14
USP16-204ENST00000399976 IGFLR1Q9H665 355 aa7.92□□□□□ -1.14
USP16-204ENST00000399976 PIDD1Q9HB75 910 aa7.92□□□□□ -1.14
USP16-204ENST00000399976 TMEM30AQ9NV96 361 aa7.92□□□□□ -1.14
USP16-204ENST00000399976 ZNHIT6Q9NWK9 470 aaKnown RBP7.92□□□□□ -1.14
USP16-204ENST00000399976 LUC7L2Q9Y383 392 aaKnown RBP7.92□□□□□ -1.14
USP16-204ENST00000399976 TICRRQ7Z2Z1 1910 aa7.92□□□□□ -1.14
USP16-204ENST00000399976 TRAV19A0A0A6YYK7 116 aa7.92□□□□□ -1.14
USP16-204ENST00000399976 EIF3CLB5ME19 914 aaKnown RBP7.92□□□□□ -1.14
USP16-204ENST00000399976 DPYSL4O14531 572 aa7.92□□□□□ -1.14
USP16-204ENST00000399976 EPHB6O15197 1021 aa7.92□□□□□ -1.14
USP16-204ENST00000399976 CCL16O15467 120 aa7.92□□□□□ -1.14
USP16-204ENST00000399976 THAP12O43422 761 aa7.92□□□□□ -1.14
USP16-204ENST00000399976 MFAP3LO75121 409 aa7.92□□□□□ -1.14
USP16-204ENST00000399976 DAB1O75553 588 aa7.92□□□□□ -1.14
USP16-204ENST00000399976 ENDOD1O94919 500 aa7.92□□□□□ -1.14
USP16-204ENST00000399976 KRT5P13647 590 aa7.92□□□□□ -1.14
USP16-204ENST00000399976 CHRNB2P17787 502 aa7.92□□□□□ -1.14
USP16-204ENST00000399976 KCNA5P22460 613 aa7.92□□□□□ -1.14
USP16-204ENST00000399976 MMP8P22894 467 aa7.92□□□□□ -1.14
USP16-204ENST00000399976 FCARP24071 287 aa7.92□□□□□ -1.14
USP16-204ENST00000399976 MAGEA9P43362 315 aa7.92□□□□□ -1.14
USP16-204ENST00000399976 PDCLQ13371 301 aa7.92□□□□□ -1.14
USP16-204ENST00000399976 ACAP1Q15027 740 aa7.92□□□□□ -1.14
USP16-204ENST00000399976 E2F5Q15329 346 aa7.92□□□□□ -1.14
USP16-204ENST00000399976 ASIC2Q16515 512 aa7.92□□□□□ -1.14
USP16-204ENST00000399976 HGSNATQ68CP4 663 aa7.92□□□□□ -1.14
USP16-204ENST00000399976 TOGARAM2Q6ZUX3 1019 aa7.92□□□□□ -1.14
USP16-204ENST00000399976 GAREM2Q75VX8 874 aa7.92□□□□□ -1.14
USP16-204ENST00000399976 NOP9Q86U38 636 aaKnown RBP7.92□□□□□ -1.14
USP16-204ENST00000399976 PHF6Q8IWS0 365 aaKnown RBP eCLIP7.92□□□□□ -1.14
USP16-204ENST00000399976 CCDC170Q8IYT3 715 aa7.92□□□□□ -1.14
USP16-204ENST00000399976 CELF5Q8N6W0 485 aaKnown RBP7.92□□□□□ -1.14
USP16-204ENST00000399976 ZNF557Q8N988 423 aaPredicted RBP7.92□□□□□ -1.14
USP16-204ENST00000399976 OR8K1Q8NGG5 319 aa7.92□□□□□ -1.14
USP16-204ENST00000399976 IPO4Q8TEX9 1081 aaKnown RBP7.92□□□□□ -1.14
USP16-204ENST00000399976 FNIP1Q8TF40 1166 aa7.92□□□□□ -1.14
USP16-204ENST00000399976 EIF3CQ99613 913 aaKnown RBP7.92□□□□□ -1.14
USP16-204ENST00000399976 AGPAT1Q99943 283 aa7.92□□□□□ -1.14
USP16-204ENST00000399976 DCLK3Q9C098 648 aa7.92□□□□□ -1.14
USP16-204ENST00000399976 ZNF334Q9HCZ1 680 aaPredicted RBP7.92□□□□□ -1.14
USP16-204ENST00000399976 FAM207AQ9NSI2 230 aaPredicted RBP7.92□□□□□ -1.14
USP16-204ENST00000399976 MTPAPQ9NVV4 582 aaKnown RBP eCLIP7.92□□□□□ -1.14
USP16-204ENST00000399976 CHD5Q8TDI0 1954 aa7.92□□□□□ -1.14
USP16-204ENST00000399976 MUC22E2RYF6 1773 aaPredicted RBP7.91□□□□□ -1.14
USP16-204ENST00000399976 TCRBV5S1A1TA0A578 114 aa7.91□□□□□ -1.14
USP16-204ENST00000399976 E2F8A0AVK6 867 aa7.91□□□□□ -1.14
USP16-204ENST00000399976 M0QYV0 167 aa7.91□□□□□ -1.14
USP16-204ENST00000399976 SLC9A3R1O14745 358 aaPredicted RBP7.91□□□□□ -1.14
USP16-204ENST00000399976 CYP26A1O43174 497 aa7.91□□□□□ -1.14
USP16-204ENST00000399976 HSF2BPO75031 334 aa7.91□□□□□ -1.14
USP16-204ENST00000399976 RFPL2O75678 378 aa7.91□□□□□ -1.14
USP16-204ENST00000399976 ZBED1O96006 694 aa7.91□□□□□ -1.14
USP16-204ENST00000399976 RALAP11233 206 aa7.91□□□□□ -1.14
USP16-204ENST00000399976 KRT9P35527 623 aa7.91□□□□□ -1.14
USP16-204ENST00000399976 GSDMDP57764 484 aa7.91□□□□□ -1.14
USP16-204ENST00000399976 GOLGA8FQ08AF8 430 aa7.91□□□□□ -1.14
USP16-204ENST00000399976 GOLGA8DPQ0D2H9 430 aa7.91□□□□□ -1.14
USP16-204ENST00000399976 CMTM8Q8IZV2 173 aa7.91□□□□□ -1.14
USP16-204ENST00000399976 C12orf29Q8N999 325 aa7.91□□□□□ -1.14
USP16-204ENST00000399976 SMOC2Q9H3U7 446 aa7.91□□□□□ -1.14
USP16-204ENST00000399976 MRPS23Q9Y3D9 190 aaKnown RBP7.91□□□□□ -1.14
USP16-204ENST00000399976 CHADO15335 359 aa7.91□□□□□ -1.14
USP16-204ENST00000399976 HCRTO43612 131 aa7.91□□□□□ -1.14
USP16-204ENST00000399976 C7P10643 843 aa7.91□□□□□ -1.14
USP16-204ENST00000399976 BRD2P25440 801 aaKnown RBP7.91□□□□□ -1.14
USP16-204ENST00000399976 HTR7P34969 479 aa7.91□□□□□ -1.14
USP16-204ENST00000399976 CA8P35219 290 aa7.91□□□□□ -1.14
USP16-204ENST00000399976 ZNF135P52742 658 aaPredicted RBP7.91□□□□□ -1.14
USP16-204ENST00000399976 CACNA2D1P54289 1103 aa7.91□□□□□ -1.14
USP16-204ENST00000399976 HADHBP55084 474 aaKnown RBP7.91□□□□□ -1.14
USP16-204ENST00000399976 NRG1Q02297 640 aaPredicted RBP7.91□□□□□ -1.14
USP16-204ENST00000399976 LRMPQ12912 555 aa7.91□□□□□ -1.14
USP16-204ENST00000399976 PDGFRLQ15198 375 aa7.91□□□□□ -1.14
USP16-204ENST00000399976 ZNF77Q15935 545 aa7.91□□□□□ -1.14
USP16-204ENST00000399976 ASTE1Q2TB18 679 aaPredicted RBP7.91□□□□□ -1.14
USP16-204ENST00000399976 ARHGAP29Q52LW3 1261 aa7.91□□□□□ -1.14
USP16-204ENST00000399976 HECTD3Q5T447 861 aa7.91□□□□□ -1.14
USP16-204ENST00000399976 GRASPQ7Z6J2 395 aaPredicted RBP7.91□□□□□ -1.14
USP16-204ENST00000399976 SLC47A2Q86VL8 602 aa7.91□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms