RNA–Protein interactions for RNA: ENST00000397442.5

CPNE1-203, Transcript of copine 1, humanhuman

TSL 5 BASIC

Gene CPNE1, Length 1,695 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-203ENST00000397442 SCAMP5Q8TAC9 235 aa28.85■■■□□ 2.21
CPNE1-203ENST00000397442 GADD45GIP1Q8TAE8 222 aaPredicted RBP28.85■■■□□ 2.21
CPNE1-203ENST00000397442 UBE2Q2Q8WVN8 375 aa28.85■■■□□ 2.21
CPNE1-203ENST00000397442 ALG3Q92685 438 aa28.85■■■□□ 2.21
CPNE1-203ENST00000397442 C17orf80Q9BSJ5 609 aa28.85■■■□□ 2.21
CPNE1-203ENST00000397442 MRPL17Q9NRX2 175 aaKnown RBP28.85■■■□□ 2.21
CPNE1-203ENST00000397442 MIF4GDA9UHW6 222 aaKnown RBP28.84■■■□□ 2.21
CPNE1-203ENST00000397442 TRIM66O15016 1216 aa28.84■■■□□ 2.21
CPNE1-203ENST00000397442 ZNF185O15231 689 aa28.84■■■□□ 2.21
CPNE1-203ENST00000397442 ABLIM3O94929 683 aa28.84■■■□□ 2.21
CPNE1-203ENST00000397442 ZBED1O96006 694 aa28.84■■■□□ 2.21
CPNE1-203ENST00000397442 USP17L7P0C7H9 530 aa28.84■■■□□ 2.21
CPNE1-203ENST00000397442 HAPLN1P10915 354 aaPredicted RBP28.84■■■□□ 2.21
CPNE1-203ENST00000397442 TCP1P17987 556 aaKnown RBP28.84■■■□□ 2.21
CPNE1-203ENST00000397442 GPD1P21695 349 aa28.84■■■□□ 2.21
CPNE1-203ENST00000397442 CTNNA1P35221 906 aaKnown RBP28.84■■■□□ 2.21
CPNE1-203ENST00000397442 PEX5P50542 639 aa28.84■■■□□ 2.21
CPNE1-203ENST00000397442 SLC5A3P53794 718 aa28.84■■■□□ 2.21
CPNE1-203ENST00000397442 DUSP4Q13115 394 aa28.84■■■□□ 2.21
CPNE1-203ENST00000397442 GDF15Q99988 308 aa28.84■■■□□ 2.21
CPNE1-203ENST00000397442 PLVAPQ9BX97 442 aa28.84■■■□□ 2.21
CPNE1-203ENST00000397442 SOAT2O75908 522 aa28.83■■■□□ 2.21
CPNE1-203ENST00000397442 PDGFRAP16234 1089 aa28.83■■■□□ 2.21
CPNE1-203ENST00000397442 CTNNA2P26232 953 aa28.83■■■□□ 2.21
CPNE1-203ENST00000397442 TAS2R40P59535 323 aa28.83■■■□□ 2.21
CPNE1-203ENST00000397442 TUBB2AQ13885 445 aa28.83■■■□□ 2.21
CPNE1-203ENST00000397442 SDHAF4Q5VUM1 108 aa28.83■■■□□ 2.21
CPNE1-203ENST00000397442 HFE2Q6ZVN8 426 aa28.83■■■□□ 2.21
CPNE1-203ENST00000397442 ZNF461Q8TAF7 563 aa28.83■■■□□ 2.21
CPNE1-203ENST00000397442 TUBB2BQ9BVA1 445 aa28.83■■■□□ 2.21
CPNE1-203ENST00000397442 ASNSD1Q9NWL6 643 aa28.83■■■□□ 2.21
CPNE1-203ENST00000397442 USTQ9Y2C2 406 aa28.83■■■□□ 2.21
CPNE1-203ENST00000397442 RWDD3Q9Y3V2 267 aa28.83■■■□□ 2.21
CPNE1-203ENST00000397442 YJEFN3A6XGL0 299 aa28.83■■■□□ 2.21
CPNE1-203ENST00000397442 E7ENQ6 273 aa28.83■■■□□ 2.21
CPNE1-203ENST00000397442 C5orf67F2Z3F1 127 aa28.83■■■□□ 2.21
CPNE1-203ENST00000397442 DPYSL4O14531 572 aa28.83■■■□□ 2.21
CPNE1-203ENST00000397442 HSF2BPO75031 334 aa28.83■■■□□ 2.21
CPNE1-203ENST00000397442 TCF4P15884 667 aa28.83■■■□□ 2.21
CPNE1-203ENST00000397442 RAB33AQ14088 237 aa28.83■■■□□ 2.21
CPNE1-203ENST00000397442 CCDC14Q49A88 953 aa28.83■■■□□ 2.21
CPNE1-203ENST00000397442 DCAF12L1Q5VU92 463 aa28.83■■■□□ 2.21
CPNE1-203ENST00000397442 CNPY3Q9BT09 278 aa28.83■■■□□ 2.21
CPNE1-203ENST00000397442 RXFP1Q9HBX9 757 aa28.83■■■□□ 2.21
CPNE1-203ENST00000397442 ALG13Q9NP73 1137 aaKnown RBP28.83■■■□□ 2.21
CPNE1-203ENST00000397442 FNIP2Q9P278 1114 aa28.83■■■□□ 2.21
CPNE1-203ENST00000397442 AFF4Q9UHB7 1163 aaKnown RBP28.83■■■□□ 2.21
CPNE1-203ENST00000397442 LZTS1Q9Y250 596 aa28.83■■■□□ 2.21
CPNE1-203ENST00000397442 PCDHA3Q9Y5H8 950 aa28.83■■■□□ 2.21
CPNE1-203ENST00000397442 COL4A4P53420 1690 aaPredicted RBP28.82■■■□□ 2.2
CPNE1-203ENST00000397442 KCNK3O14649 394 aa28.82■■■□□ 2.2
CPNE1-203ENST00000397442 GLI1P08151 1106 aa28.82■■■□□ 2.2
CPNE1-203ENST00000397442 YWHAZP63104 245 aaKnown RBP28.82■■■□□ 2.2
CPNE1-203ENST00000397442 MGAT5BQ3V5L5 792 aa28.82■■■□□ 2.2
CPNE1-203ENST00000397442 TPGS2Q68CL5 300 aa28.82■■■□□ 2.2
CPNE1-203ENST00000397442 CC2D1AQ6P1N0 951 aaPredicted RBP28.82■■■□□ 2.2
CPNE1-203ENST00000397442 STKLD1Q8NE28 680 aa28.82■■■□□ 2.2
CPNE1-203ENST00000397442 CFAP57Q96MR6 1250 aa28.82■■■□□ 2.2
CPNE1-203ENST00000397442 C11orf84Q9BUA3 381 aaPredicted RBP28.82■■■□□ 2.2
CPNE1-203ENST00000397442 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP28.82■■■□□ 2.2
CPNE1-203ENST00000397442 RANBP2P49792 3224 aaKnown RBP28.82■■■□□ 2.2
CPNE1-203ENST00000397442 CCDC66A2RUB6 948 aa28.81■■■□□ 2.2
CPNE1-203ENST00000397442 CA3P07451 260 aa28.81■■■□□ 2.2
CPNE1-203ENST00000397442 SH3PXD2AQ5TCZ1 1133 aa28.81■■■□□ 2.2
CPNE1-203ENST00000397442 CREG2Q8IUH2 290 aa28.81■■■□□ 2.2
CPNE1-203ENST00000397442 IRGQQ8WZA9 623 aa28.81■■■□□ 2.2
CPNE1-203ENST00000397442 FAM149B1Q96BN6 582 aa28.81■■■□□ 2.2
CPNE1-203ENST00000397442 SEPT5Q99719 369 aaPredicted RBP28.81■■■□□ 2.2
CPNE1-203ENST00000397442 UBE2OQ9C0C9 1292 aaKnown RBP28.81■■■□□ 2.2
CPNE1-203ENST00000397442 RIOK3O14730 519 aaKnown RBP28.8■■■□□ 2.2
CPNE1-203ENST00000397442 TEX28O15482 410 aa28.8■■■□□ 2.2
CPNE1-203ENST00000397442 SART1O43290 800 aaKnown RBP28.8■■■□□ 2.2
CPNE1-203ENST00000397442 LRCH4O75427 683 aa28.8■■■□□ 2.2
CPNE1-203ENST00000397442 DAB1O75553 588 aa28.8■■■□□ 2.2
CPNE1-203ENST00000397442 SEC24AO95486 1093 aa28.8■■■□□ 2.2
CPNE1-203ENST00000397442 FYNP06241 537 aa28.8■■■□□ 2.2
CPNE1-203ENST00000397442 ATF2P15336 505 aa28.8■■■□□ 2.2
CPNE1-203ENST00000397442 ACAP1Q15027 740 aa28.8■■■□□ 2.2
CPNE1-203ENST00000397442 C15orf59Q2T9L4 293 aaPredicted RBP28.8■■■□□ 2.2
CPNE1-203ENST00000397442 SPPL3Q8TCT6 385 aa28.8■■■□□ 2.2
CPNE1-203ENST00000397442 SLC2A13Q96QE2 648 aa28.8■■■□□ 2.2
CPNE1-203ENST00000397442 DDX23Q9BUQ8 820 aaKnown RBP28.8■■■□□ 2.2
CPNE1-203ENST00000397442 ADAM33Q9BZ11 813 aa28.8■■■□□ 2.2
CPNE1-203ENST00000397442 PCDHA11Q9Y5I1 949 aa28.8■■■□□ 2.2
CPNE1-203ENST00000397442 GREB1Q4ZG55 1949 aa28.8■■■□□ 2.2
CPNE1-203ENST00000397442 CHD9Q3L8U1 2897 aa28.8■■■□□ 2.2
CPNE1-203ENST00000397442 DNAJB1P25685 340 aa28.8■■■□□ 2.2
CPNE1-203ENST00000397442 PTPN9P43378 593 aa28.8■■■□□ 2.2
CPNE1-203ENST00000397442 ERVFC1P60507 584 aa28.8■■■□□ 2.2
CPNE1-203ENST00000397442 RAB6CQ53S08 254 aa28.8■■■□□ 2.2
CPNE1-203ENST00000397442 DEFB106AQ8N104 65 aa28.8■■■□□ 2.2
CPNE1-203ENST00000397442 NUP93Q8N1F7 819 aa28.8■■■□□ 2.2
CPNE1-203ENST00000397442 UBL4BQ8N7F7 174 aa28.8■■■□□ 2.2
CPNE1-203ENST00000397442 GPR152Q8TDT2 470 aa28.8■■■□□ 2.2
CPNE1-203ENST00000397442 SPATA17Q96L03 361 aa28.8■■■□□ 2.2
CPNE1-203ENST00000397442 RAB6CQ9H0N0 254 aa28.8■■■□□ 2.2
CPNE1-203ENST00000397442 IL37Q9NZH6 218 aa28.8■■■□□ 2.2
CPNE1-203ENST00000397442 HSFX1Q9UBD0 423 aa28.8■■■□□ 2.2
CPNE1-203ENST00000397442 SSX2IPQ9Y2D8 614 aa28.8■■■□□ 2.2
CPNE1-203ENST00000397442 YBX2Q9Y2T7 364 aaKnown RBP28.8■■■□□ 2.2
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms