RNA–Protein interactions for RNA: ENST00000397004.8

NUP98-204, Transcript of nucleoporin 98, humanhuman

TSL 1 (best) BASIC

Gene NUP98, Length 3,923 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-204ENST00000397004 XYLT1Q86Y38 959 aa14.53□□□□□ -0.08
NUP98-204ENST00000397004 LMNTD2Q8IXW0 634 aa14.53□□□□□ -0.08
NUP98-204ENST00000397004 HSPH1Q92598 858 aa14.53□□□□□ -0.08
NUP98-204ENST00000397004 MAGEB5Q9BZ81 275 aa14.53□□□□□ -0.08
NUP98-204ENST00000397004 WDR35Q9P2L0 1181 aa14.53□□□□□ -0.08
NUP98-204ENST00000397004 PCDHGC3Q9UN70 934 aa14.53□□□□□ -0.08
NUP98-204ENST00000397004 MAFBQ9Y5Q3 323 aaPredicted RBP14.53□□□□□ -0.08
NUP98-204ENST00000397004 B2RBV5 119 aa14.52□□□□□ -0.08
NUP98-204ENST00000397004 MSCO60682 206 aa14.52□□□□□ -0.08
NUP98-204ENST00000397004 LGR5O75473 907 aa14.52□□□□□ -0.08
NUP98-204ENST00000397004 LSM8O95777 96 aaKnown RBP14.52□□□□□ -0.08
NUP98-204ENST00000397004 ESRRAP11474 423 aaPredicted RBP14.52□□□□□ -0.08
NUP98-204ENST00000397004 GMPRP36959 345 aa14.52□□□□□ -0.08
NUP98-204ENST00000397004 PAPOLAP51003 745 aaKnown RBP14.52□□□□□ -0.08
NUP98-204ENST00000397004 RAB27AP51159 221 aa14.52□□□□□ -0.08
NUP98-204ENST00000397004 RAP1GDS1P52306 607 aa14.52□□□□□ -0.08
NUP98-204ENST00000397004 YWHAZP63104 245 aaKnown RBP14.52□□□□□ -0.08
NUP98-204ENST00000397004 ZNF200P98182 395 aaPredicted RBP14.52□□□□□ -0.08
NUP98-204ENST00000397004 TMEM35BQ8NCS4 154 aa14.52□□□□□ -0.08
NUP98-204ENST00000397004 SPATA18Q8TC71 538 aa14.52□□□□□ -0.08
NUP98-204ENST00000397004 RSAD2Q8WXG1 361 aa14.52□□□□□ -0.08
NUP98-204ENST00000397004 PHACTR1Q9C0D0 580 aa14.52□□□□□ -0.08
NUP98-204ENST00000397004 ZNF214Q9UL59 606 aaPredicted RBP14.52□□□□□ -0.08
NUP98-204ENST00000397004 TRIM49D1C9J1S8 452 aa14.52□□□□□ -0.08
NUP98-204ENST00000397004 PIK3R2O00459 728 aa14.52□□□□□ -0.08
NUP98-204ENST00000397004 CSH1P0DML2 217 aa14.52□□□□□ -0.08
NUP98-204ENST00000397004 CSH2P0DML3 217 aa14.52□□□□□ -0.08
NUP98-204ENST00000397004 EIF4BP23588 611 aaKnown RBP14.52□□□□□ -0.08
NUP98-204ENST00000397004 PHBP35232 272 aa14.52□□□□□ -0.08
NUP98-204ENST00000397004 PGM1P36871 562 aa14.52□□□□□ -0.08
NUP98-204ENST00000397004 UBAP2LQ14157 1087 aaKnown RBP14.52□□□□□ -0.08
NUP98-204ENST00000397004 MPP5Q8N3R9 675 aa14.52□□□□□ -0.08
NUP98-204ENST00000397004 ZNF668Q96K58 619 aaPredicted RBP14.52□□□□□ -0.08
NUP98-204ENST00000397004 CYTH2Q99418 400 aa14.52□□□□□ -0.08
NUP98-204ENST00000397004 CCDC106Q9BWC9 280 aa14.52□□□□□ -0.08
NUP98-204ENST00000397004 MAP3K20Q9NYL2 800 aaKnown RBP14.52□□□□□ -0.08
NUP98-204ENST00000397004 SLC17A6Q9P2U8 582 aa14.52□□□□□ -0.08
NUP98-204ENST00000397004 UBTFL6P0CB48 400 aaPredicted RBP14.52□□□□□ -0.09
NUP98-204ENST00000397004 CCND2P30279 289 aa14.52□□□□□ -0.09
NUP98-204ENST00000397004 ARRB2P32121 409 aa14.52□□□□□ -0.09
NUP98-204ENST00000397004 CPOXP36551 454 aa14.52□□□□□ -0.09
NUP98-204ENST00000397004 RIPOR1Q6ZS17 1223 aa14.52□□□□□ -0.09
NUP98-204ENST00000397004 PCGF5Q86SE9 256 aa14.52□□□□□ -0.09
NUP98-204ENST00000397004 UNC5BQ8IZJ1 945 aa14.52□□□□□ -0.09
NUP98-204ENST00000397004 PDIK1LQ8N165 341 aa14.52□□□□□ -0.09
NUP98-204ENST00000397004 VPS52Q8N1B4 723 aa14.52□□□□□ -0.09
NUP98-204ENST00000397004 TSC22D3Q99576 134 aa14.52□□□□□ -0.09
NUP98-204ENST00000397004 POPDC2Q9HBU9 364 aa14.52□□□□□ -0.09
NUP98-204ENST00000397004 PLLPQ9Y342 182 aa14.52□□□□□ -0.09
NUP98-204ENST00000397004 PPME1Q9Y570 386 aa14.52□□□□□ -0.09
NUP98-204ENST00000397004 NR2E3Q9Y5X4 410 aa14.52□□□□□ -0.09
NUP98-204ENST00000397004 SPATA31C2B4DYI2 1134 aa14.51□□□□□ -0.09
NUP98-204ENST00000397004 HOXC6P09630 235 aa14.51□□□□□ -0.09
NUP98-204ENST00000397004 SUPT20HL2P0C7V6 817 aa14.51□□□□□ -0.09
NUP98-204ENST00000397004 NAMPTP43490 491 aa14.51□□□□□ -0.09
NUP98-204ENST00000397004 CACNA2D1P54289 1103 aa14.51□□□□□ -0.09
NUP98-204ENST00000397004 KDSRQ06136 332 aa14.51□□□□□ -0.09
NUP98-204ENST00000397004 TUBB3Q13509 450 aa14.51□□□□□ -0.09
NUP98-204ENST00000397004 SUPT20HL1Q3ZLR7 823 aa14.51□□□□□ -0.09
NUP98-204ENST00000397004 XKR3Q5GH77 459 aa14.51□□□□□ -0.09
NUP98-204ENST00000397004 FAM91A1Q658Y4 838 aa14.51□□□□□ -0.09
NUP98-204ENST00000397004 CWF19L1Q69YN2 538 aaKnown RBP14.51□□□□□ -0.09
NUP98-204ENST00000397004 ARID3BQ8IVW6 561 aaPredicted RBP14.51□□□□□ -0.09
NUP98-204ENST00000397004 KCNN1Q92952 543 aa14.51□□□□□ -0.09
NUP98-204ENST00000397004 SLC13A1Q9BZW2 595 aa14.51□□□□□ -0.09
NUP98-204ENST00000397004 EFR3BQ9Y2G0 817 aa14.51□□□□□ -0.09
NUP98-204ENST00000397004 ANK1P16157 1881 aa14.51□□□□□ -0.09
NUP98-204ENST00000397004 PRR5-ARHGAP8B1AHC4 643 aa14.51□□□□□ -0.09
NUP98-204ENST00000397004 APOC4-APOC2K7ER74 178 aa14.51□□□□□ -0.09
NUP98-204ENST00000397004 APOC2P02655 101 aa14.51□□□□□ -0.09
NUP98-204ENST00000397004 GRIA1P42261 906 aa14.51□□□□□ -0.09
NUP98-204ENST00000397004 ARHGAP8P85298 464 aa14.51□□□□□ -0.09
NUP98-204ENST00000397004 CCDC6Q16204 474 aa14.51□□□□□ -0.09
NUP98-204ENST00000397004 TSNAXIP1Q2TAA8 658 aa14.51□□□□□ -0.09
NUP98-204ENST00000397004 ZNF534Q76KX8 674 aa14.51□□□□□ -0.09
NUP98-204ENST00000397004 FAM83AQ86UY5 434 aa14.51□□□□□ -0.09
NUP98-204ENST00000397004 BRSK2Q8IWQ3 736 aa14.51□□□□□ -0.09
NUP98-204ENST00000397004 LPAR1Q92633 364 aa14.51□□□□□ -0.09
NUP98-204ENST00000397004 ALKBH8Q96BT7 664 aaKnown RBP14.51□□□□□ -0.09
NUP98-204ENST00000397004 FAM161BQ96MY7 647 aa14.51□□□□□ -0.09
NUP98-204ENST00000397004 TUBGCP5Q96RT8 1024 aa14.51□□□□□ -0.09
NUP98-204ENST00000397004 MEI4A8MW99 385 aa14.51□□□□□ -0.09
NUP98-204ENST00000397004 BUD23O43709 281 aaKnown RBP14.51□□□□□ -0.09
NUP98-204ENST00000397004 ENDOD1O94919 500 aa14.51□□□□□ -0.09
NUP98-204ENST00000397004 IL1BP01584 269 aa14.51□□□□□ -0.09
NUP98-204ENST00000397004 LMNAP02545 664 aaKnown RBP14.51□□□□□ -0.09
NUP98-204ENST00000397004 ZBTB16Q05516 673 aa14.51□□□□□ -0.09
NUP98-204ENST00000397004 TMEM132BQ14DG7 1078 aa14.51□□□□□ -0.09
NUP98-204ENST00000397004 SLC30A9Q6PML9 568 aa14.51□□□□□ -0.09
NUP98-204ENST00000397004 CFAP36Q96G28 342 aa14.51□□□□□ -0.09
NUP98-204ENST00000397004 MMADHCQ9H3L0 296 aaPredicted RBP14.51□□□□□ -0.09
NUP98-204ENST00000397004 SIRPGQ9P1W8 387 aa14.51□□□□□ -0.09
NUP98-204ENST00000397004 ANKRD33BA6NCL7 494 aa14.5□□□□□ -0.09
NUP98-204ENST00000397004 KIF3CO14782 793 aa14.5□□□□□ -0.09
NUP98-204ENST00000397004 KLF11O14901 512 aa14.5□□□□□ -0.09
NUP98-204ENST00000397004 HNRNPCL1O60812 293 aaKnown RBP14.5□□□□□ -0.09
NUP98-204ENST00000397004 TRUB2O95900 331 aaKnown RBP14.5□□□□□ -0.09
NUP98-204ENST00000397004 GJB1P08034 283 aa14.5□□□□□ -0.09
NUP98-204ENST00000397004 ZCCHC18P0CG32 403 aa14.5□□□□□ -0.09
NUP98-204ENST00000397004 YWHAGP61981 247 aaKnown RBP eCLIP14.5□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms