RNA–Protein interactions for RNA: ENST00000396832.5

CSNK1E-203, Transcript of casein kinase 1 epsilon, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSNK1E, Length 2,791 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-203ENST00000396832 APOPT1Q96IL0 206 aa24.99■■□□□ 1.59
CSNK1E-203ENST00000396832 CLIC5Q9NZA1 410 aa24.99■■□□□ 1.59
CSNK1E-203ENST00000396832 FARP1Q9Y4F1 1045 aaPredicted RBP24.99■■□□□ 1.59
CSNK1E-203ENST00000396832 ZC3H11AO75152 810 aaKnown RBP eCLIP24.99■■□□□ 1.594e-6■■■■□ 21.5
CSNK1E-203ENST00000396832 ITGBL1O95965 494 aaPredicted RBP24.99■■□□□ 1.59
CSNK1E-203ENST00000396832 ASLP04424 464 aa24.99■■□□□ 1.59
CSNK1E-203ENST00000396832 GARTP22102 1010 aa24.99■■□□□ 1.59
CSNK1E-203ENST00000396832 PSMD6Q15008 389 aa24.99■■□□□ 1.59
CSNK1E-203ENST00000396832 ZNF526Q8TF50 670 aaPredicted RBP24.99■■□□□ 1.59
CSNK1E-203ENST00000396832 ZNF668Q96K58 619 aaPredicted RBP24.99■■□□□ 1.59
CSNK1E-203ENST00000396832 ZNF395Q9H8N7 513 aaPredicted RBP24.99■■□□□ 1.59
CSNK1E-203ENST00000396832 H0YIN7 160 aa24.99■■□□□ 1.59
CSNK1E-203ENST00000396832 FKBP6O75344 327 aa24.99■■□□□ 1.59
CSNK1E-203ENST00000396832 OR6B1O95007 311 aa24.99■■□□□ 1.59
CSNK1E-203ENST00000396832 IMPDH2P12268 514 aa24.99■■□□□ 1.59
CSNK1E-203ENST00000396832 IL1R2P27930 398 aa24.99■■□□□ 1.59
CSNK1E-203ENST00000396832 LARP7Q4G0J3 582 aaKnown RBP eCLIP24.99■■□□□ 1.59
CSNK1E-203ENST00000396832 SFT2D3Q587I9 215 aa24.99■■□□□ 1.59
CSNK1E-203ENST00000396832 RSAD2Q8WXG1 361 aa24.99■■□□□ 1.59
CSNK1E-203ENST00000396832 CNTN3Q9P232 1028 aa24.99■■□□□ 1.59
CSNK1E-203ENST00000396832 XPO7Q9UIA9 1087 aaKnown RBP24.99■■□□□ 1.59
CSNK1E-203ENST00000396832 KIAA1217Q5T5P2 1943 aa24.98■■□□□ 1.59
CSNK1E-203ENST00000396832 FAM200BP0CF97 657 aa24.98■■□□□ 1.59
CSNK1E-203ENST00000396832 C1QBPQ07021 282 aaKnown RBP24.98■■□□□ 1.59
CSNK1E-203ENST00000396832 SLC27A3Q5K4L6 730 aa24.98■■□□□ 1.59
CSNK1E-203ENST00000396832 CIAPIN1Q6FI81 312 aa24.98■■□□□ 1.59
CSNK1E-203ENST00000396832 GSTCDQ8NEC7 633 aa24.98■■□□□ 1.59
CSNK1E-203ENST00000396832 FAM172AQ8WUF8 416 aa24.98■■□□□ 1.59
CSNK1E-203ENST00000396832 PYDC1Q8WXC3 89 aa24.98■■□□□ 1.59
CSNK1E-203ENST00000396832 MPP4Q96JB8 637 aa24.98■■□□□ 1.59
CSNK1E-203ENST00000396832 CYP26B1Q9NR63 512 aa24.98■■□□□ 1.59
CSNK1E-203ENST00000396832 ZDHHC7Q9NXF8 308 aa24.98■■□□□ 1.59
CSNK1E-203ENST00000396832 SNCAIPQ9Y6H5 919 aa24.98■■□□□ 1.59
CSNK1E-203ENST00000396832 HNRNPRO43390 633 aaKnown RBP24.98■■□□□ 1.59
CSNK1E-203ENST00000396832 IL1BP01584 269 aa24.98■■□□□ 1.59
CSNK1E-203ENST00000396832 RPL22P35268 128 aaKnown RBP24.98■■□□□ 1.59
CSNK1E-203ENST00000396832 ASPHQ12797 758 aa24.98■■□□□ 1.59
CSNK1E-203ENST00000396832 PTK7Q13308 1070 aa24.98■■□□□ 1.59
CSNK1E-203ENST00000396832 TTLL12Q14166 644 aaPredicted RBP24.98■■□□□ 1.59
CSNK1E-203ENST00000396832 NIPA1Q7RTP0 329 aa24.98■■□□□ 1.59
CSNK1E-203ENST00000396832 PPIL6Q8IXY8 311 aa24.98■■□□□ 1.59
CSNK1E-203ENST00000396832 SHKBP1Q8TBC3 707 aa24.98■■□□□ 1.59
CSNK1E-203ENST00000396832 MTMR12Q9C0I1 747 aa24.98■■□□□ 1.59
CSNK1E-203ENST00000396832 S100A14Q9HCY8 104 aa24.98■■□□□ 1.59
CSNK1E-203ENST00000396832 WDR81Q562E7 1941 aa24.98■■□□□ 1.59
CSNK1E-203ENST00000396832 ITGAVP06756 1048 aa24.97■■□□□ 1.59
CSNK1E-203ENST00000396832 PSMA2P25787 234 aa24.97■■□□□ 1.59
CSNK1E-203ENST00000396832 SFNP31947 248 aa24.97■■□□□ 1.59
CSNK1E-203ENST00000396832 LPCAT4Q643R3 524 aa24.97■■□□□ 1.59
CSNK1E-203ENST00000396832 PCGF5Q86SE9 256 aa24.97■■□□□ 1.59
CSNK1E-203ENST00000396832 ARID3BQ8IVW6 561 aaPredicted RBP24.97■■□□□ 1.59
CSNK1E-203ENST00000396832 JOSD2Q8TAC2 188 aa24.97■■□□□ 1.59
CSNK1E-203ENST00000396832 HSPH1Q92598 858 aa24.97■■□□□ 1.59
CSNK1E-203ENST00000396832 NTPCRQ9BSD7 190 aaKnown RBP24.97■■□□□ 1.59
CSNK1E-203ENST00000396832 ARHGAP28Q9P2N2 729 aa24.97■■□□□ 1.59
CSNK1E-203ENST00000396832 ZNRF3Q9ULT6 936 aa24.97■■□□□ 1.59
CSNK1E-203ENST00000396832 IQANK1A0A1B0GTG1 560 aa24.97■■□□□ 1.59
CSNK1E-203ENST00000396832 PIK3R2O00459 728 aa24.97■■□□□ 1.59
CSNK1E-203ENST00000396832 NDC80O14777 642 aa24.97■■□□□ 1.59
CSNK1E-203ENST00000396832 UQCRBP14927 111 aa24.97■■□□□ 1.59
CSNK1E-203ENST00000396832 RFC1P35251 1148 aaPredicted RBP24.97■■□□□ 1.59
CSNK1E-203ENST00000396832 YWHAGP61981 247 aaKnown RBP eCLIP24.97■■□□□ 1.59
CSNK1E-203ENST00000396832 DEUP1Q05D60 604 aa24.97■■□□□ 1.59
CSNK1E-203ENST00000396832 FAAP100Q0VG06 881 aa24.97■■□□□ 1.59
CSNK1E-203ENST00000396832 DHDDSQ86SQ9 333 aa24.97■■□□□ 1.59
CSNK1E-203ENST00000396832 BRWD3Q6RI45 1802 aa24.96■■□□□ 1.59
CSNK1E-203ENST00000396832 ZSCAN9O15535 394 aaPredicted RBP24.96■■□□□ 1.59
CSNK1E-203ENST00000396832 ALDH18A1P54886 795 aaKnown RBP24.96■■□□□ 1.59
CSNK1E-203ENST00000396832 GRM2Q14416 872 aa24.96■■□□□ 1.59
CSNK1E-203ENST00000396832 R3HDM1Q15032 1099 aaKnown RBP24.96■■□□□ 1.59
CSNK1E-203ENST00000396832 FAXCQ5TGI0 409 aa24.96■■□□□ 1.59
CSNK1E-203ENST00000396832 NPNTQ6UXI9 565 aa24.96■■□□□ 1.59
CSNK1E-203ENST00000396832 TFAP2BQ92481 460 aa24.96■■□□□ 1.59
CSNK1E-203ENST00000396832 NKD2Q969F2 451 aaPredicted RBP24.96■■□□□ 1.59
CSNK1E-203ENST00000396832 IKBKGQ9Y6K9 419 aa24.96■■□□□ 1.59
CSNK1E-203ENST00000396832 VCLP18206 1134 aa24.96■■□□□ 1.59
CSNK1E-203ENST00000396832 FKBP1AP62942 108 aaKnown RBP24.96■■□□□ 1.59
CSNK1E-203ENST00000396832 SLC18A2Q05940 514 aa24.96■■□□□ 1.59
CSNK1E-203ENST00000396832 KBTBD12Q3ZCT8 623 aa24.96■■□□□ 1.59
CSNK1E-203ENST00000396832 NCAPG2Q86XI2 1143 aa24.96■■□□□ 1.59
CSNK1E-203ENST00000396832 CFAP36Q96G28 342 aa24.96■■□□□ 1.59
CSNK1E-203ENST00000396832 SYNPO2Q9UMS6 1093 aa24.96■■□□□ 1.59
CSNK1E-203ENST00000396832 I3L4J1 428 aa24.95■■□□□ 1.59
CSNK1E-203ENST00000396832 KLF11O14901 512 aa24.95■■□□□ 1.59
CSNK1E-203ENST00000396832 DGAT1O75907 488 aa24.95■■□□□ 1.59
CSNK1E-203ENST00000396832 ELK3P41970 407 aa24.95■■□□□ 1.59
CSNK1E-203ENST00000396832 MYL6P60660 151 aa24.95■■□□□ 1.59
CSNK1E-203ENST00000396832 OSTNP61366 133 aa24.95■■□□□ 1.59
CSNK1E-203ENST00000396832 MSLNQ13421 630 aaPredicted RBP24.95■■□□□ 1.59
CSNK1E-203ENST00000396832 MTMR2Q13614 643 aa24.95■■□□□ 1.59
CSNK1E-203ENST00000396832 EMC2Q15006 297 aa24.95■■□□□ 1.59
CSNK1E-203ENST00000396832 SMAD1Q15797 465 aaKnown RBP24.95■■□□□ 1.59
CSNK1E-203ENST00000396832 TRIM72Q6ZMU5 477 aa24.95■■□□□ 1.59
CSNK1E-203ENST00000396832 SH2D5Q6ZV89 423 aa24.95■■□□□ 1.59
CSNK1E-203ENST00000396832 ADGRG6Q86SQ4 1221 aa24.95■■□□□ 1.59
CSNK1E-203ENST00000396832 CTAGE3PQ8IX95 158 aa24.95■■□□□ 1.59
CSNK1E-203ENST00000396832 LENG1Q96BZ8 264 aaPredicted RBP24.95■■□□□ 1.59
CSNK1E-203ENST00000396832 ACAP3Q96P50 834 aa24.95■■□□□ 1.59
CSNK1E-203ENST00000396832 TRIM56Q9BRZ2 755 aaKnown RBP24.95■■□□□ 1.59
CSNK1E-203ENST00000396832 CALN1Q9BXU9 219 aa24.95■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms