RNA–Protein interactions for RNA: ENST00000396060.6

GTF2A2-202, Transcript of general transcription factor IIA subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF2A2, Length 1,582 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A2-202ENST00000396060 TJP3O95049 919 aa12.45□□□□□ -0.42
GTF2A2-202ENST00000396060 GALTP07902 379 aa12.45□□□□□ -0.42
GTF2A2-202ENST00000396060 LCP1P13796 627 aa12.45□□□□□ -0.42
GTF2A2-202ENST00000396060 IBSPP21815 317 aaPredicted RBP12.45□□□□□ -0.42
GTF2A2-202ENST00000396060 KDELR1P24390 212 aa12.45□□□□□ -0.42
GTF2A2-202ENST00000396060 MATKP42679 507 aa12.45□□□□□ -0.42
GTF2A2-202ENST00000396060 SSR1P43307 286 aaKnown RBP12.45□□□□□ -0.42
GTF2A2-202ENST00000396060 SLC11A1P49279 550 aa12.45□□□□□ -0.42
GTF2A2-202ENST00000396060 MAP3K7CLP57077 242 aa12.45□□□□□ -0.42
GTF2A2-202ENST00000396060 YWHAZP63104 245 aaKnown RBP12.45□□□□□ -0.42
GTF2A2-202ENST00000396060 RBM10P98175 930 aaKnown RBP12.45□□□□□ -0.42
GTF2A2-202ENST00000396060 SLC7A5Q01650 507 aa12.45□□□□□ -0.42
GTF2A2-202ENST00000396060 NFE2Q16621 373 aaPredicted RBP12.45□□□□□ -0.42
GTF2A2-202ENST00000396060 LRRC26Q2I0M4 334 aa12.45□□□□□ -0.42
GTF2A2-202ENST00000396060 PAN2Q504Q3 1202 aaKnown RBP12.45□□□□□ -0.42
GTF2A2-202ENST00000396060 TFDP3Q5H9I0 405 aa12.45□□□□□ -0.42
GTF2A2-202ENST00000396060 MFSD7Q6UXD7 560 aa12.45□□□□□ -0.42
GTF2A2-202ENST00000396060 SYDE1Q6ZW31 735 aaPredicted RBP12.45□□□□□ -0.42
GTF2A2-202ENST00000396060 DCP1BQ8IZD4 617 aaKnown RBP12.45□□□□□ -0.42
GTF2A2-202ENST00000396060 LRRC43Q8N309 656 aa12.45□□□□□ -0.42
GTF2A2-202ENST00000396060 AENQ8WTP8 325 aaKnown RBP12.45□□□□□ -0.42
GTF2A2-202ENST00000396060 RAPGEF5Q92565 580 aa12.45□□□□□ -0.42
GTF2A2-202ENST00000396060 FUBP3Q96I24 572 aaKnown RBP eCLIP12.45□□□□□ -0.42
GTF2A2-202ENST00000396060 HERPUD2Q9BSE4 406 aa12.45□□□□□ -0.42
GTF2A2-202ENST00000396060 FRMD8P1Q9BZ68 369 aaPredicted RBP12.45□□□□□ -0.42
GTF2A2-202ENST00000396060 DCLK3Q9C098 648 aa12.45□□□□□ -0.42
GTF2A2-202ENST00000396060 DMAP1Q9NPF5 467 aaPredicted RBP12.45□□□□□ -0.42
GTF2A2-202ENST00000396060 TMLHEQ9NVH6 421 aa12.45□□□□□ -0.42
GTF2A2-202ENST00000396060 MARCH5Q9NX47 278 aa12.45□□□□□ -0.42
GTF2A2-202ENST00000396060 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP12.45□□□□□ -0.42
GTF2A2-202ENST00000396060 AMACRQ9UHK6 382 aa12.45□□□□□ -0.42
GTF2A2-202ENST00000396060 USP3Q9Y6I4 520 aa12.45□□□□□ -0.42
GTF2A2-202ENST00000396060 CEP350Q5VT06 3117 aa12.45□□□□□ -0.42
GTF2A2-202ENST00000396060 PTPRDP23468 1912 aa12.44□□□□□ -0.42
GTF2A2-202ENST00000396060 CARNS1A5YM72 827 aa12.44□□□□□ -0.42
GTF2A2-202ENST00000396060 OR6C75A6NL08 312 aa12.44□□□□□ -0.42
GTF2A2-202ENST00000396060 PIK3R2O00459 728 aa12.44□□□□□ -0.42
GTF2A2-202ENST00000396060 MAP2K7O14733 419 aa12.44□□□□□ -0.42
GTF2A2-202ENST00000396060 MDM4O15151 490 aa12.44□□□□□ -0.42
GTF2A2-202ENST00000396060 TBC1D4O60343 1298 aa12.44□□□□□ -0.42
GTF2A2-202ENST00000396060 DGKIO75912 1065 aa12.44□□□□□ -0.42
GTF2A2-202ENST00000396060 KRT1P04264 644 aa12.44□□□□□ -0.42
GTF2A2-202ENST00000396060 NOS2P35228 1153 aa12.44□□□□□ -0.42
GTF2A2-202ENST00000396060 TKTL1P51854 596 aa12.44□□□□□ -0.42
GTF2A2-202ENST00000396060 DAOAP59103 153 aa12.44□□□□□ -0.42
GTF2A2-202ENST00000396060 DR1Q01658 176 aa12.44□□□□□ -0.42
GTF2A2-202ENST00000396060 ADIGQ0VDE8 80 aa12.44□□□□□ -0.42
GTF2A2-202ENST00000396060 SMARCB1Q12824 385 aa12.44□□□□□ -0.42
GTF2A2-202ENST00000396060 NNTQ13423 1086 aa12.44□□□□□ -0.42
GTF2A2-202ENST00000396060 PDK2Q15119 407 aa12.44□□□□□ -0.42
GTF2A2-202ENST00000396060 SLC25A52Q3SY17 297 aa12.44□□□□□ -0.42
GTF2A2-202ENST00000396060 DUPD1Q68J44 220 aa12.44□□□□□ -0.42
GTF2A2-202ENST00000396060 EMBQ6PCB8 327 aa12.44□□□□□ -0.42
GTF2A2-202ENST00000396060 ANKS1BQ7Z6G8 1248 aa12.44□□□□□ -0.42
GTF2A2-202ENST00000396060 PSTKQ8IV42 348 aaKnown RBP12.44□□□□□ -0.42
GTF2A2-202ENST00000396060 SIX6OS1Q8N1H7 587 aa12.44□□□□□ -0.42
GTF2A2-202ENST00000396060 HASPINQ8TF76 798 aa12.44□□□□□ -0.42
GTF2A2-202ENST00000396060 TOP1MTQ969P6 601 aa12.44□□□□□ -0.42
GTF2A2-202ENST00000396060 RNF25Q96BH1 459 aaPredicted RBP12.44□□□□□ -0.42
GTF2A2-202ENST00000396060 ERP44Q9BS26 406 aa12.44□□□□□ -0.42
GTF2A2-202ENST00000396060 FUT8Q9BYC5 575 aa12.44□□□□□ -0.42
GTF2A2-202ENST00000396060 RAB17Q9H0T7 212 aa12.44□□□□□ -0.42
GTF2A2-202ENST00000396060 EPB41L5Q9HCM4 733 aa12.44□□□□□ -0.42
GTF2A2-202ENST00000396060 TMEM30AQ9NV96 361 aa12.44□□□□□ -0.42
GTF2A2-202ENST00000396060 FAM53CQ9NYF3 392 aa12.44□□□□□ -0.42
GTF2A2-202ENST00000396060 RRN3Q9NYV6 651 aa12.44□□□□□ -0.42
GTF2A2-202ENST00000396060 DRG1Q9Y295 367 aaKnown RBP12.44□□□□□ -0.42
GTF2A2-202ENST00000396060 COL4A4P53420 1690 aaPredicted RBP12.44□□□□□ -0.42
GTF2A2-202ENST00000396060 TBKBP1A7MCY6 615 aa12.43□□□□□ -0.42
GTF2A2-202ENST00000396060 TTI1O43156 1089 aa12.43□□□□□ -0.42
GTF2A2-202ENST00000396060 PRPSAP2O60256 369 aa12.43□□□□□ -0.42
GTF2A2-202ENST00000396060 GRAP2O75791 330 aa12.43□□□□□ -0.42
GTF2A2-202ENST00000396060 GBP1P32455 592 aa12.43□□□□□ -0.42
GTF2A2-202ENST00000396060 MAGEA11P43364 429 aa12.43□□□□□ -0.42
GTF2A2-202ENST00000396060 GATMP50440 423 aa12.43□□□□□ -0.42
GTF2A2-202ENST00000396060 CACNA2D1P54289 1103 aa12.43□□□□□ -0.42
GTF2A2-202ENST00000396060 HDAC4P56524 1084 aa12.43□□□□□ -0.42
GTF2A2-202ENST00000396060 GUCY2DQ02846 1103 aa12.43□□□□□ -0.42
GTF2A2-202ENST00000396060 SMC1AQ14683 1233 aaKnown RBP12.43□□□□□ -0.42
GTF2A2-202ENST00000396060 C15orf59Q2T9L4 293 aaPredicted RBP12.43□□□□□ -0.42
GTF2A2-202ENST00000396060 VARS2Q5ST30 1063 aaKnown RBP12.43□□□□□ -0.42
GTF2A2-202ENST00000396060 MFSD5Q6N075 450 aa12.43□□□□□ -0.42
GTF2A2-202ENST00000396060 TTC27Q6P3X3 843 aa12.43□□□□□ -0.42
GTF2A2-202ENST00000396060 CCDC137Q6PK04 289 aaKnown RBP12.43□□□□□ -0.42
GTF2A2-202ENST00000396060 VSTM1Q6UX27 236 aa12.43□□□□□ -0.42
GTF2A2-202ENST00000396060 LIN28BQ6ZN17 250 aaKnown RBP eCLIP12.43□□□□□ -0.426e-6■□□□□ 8.1
GTF2A2-202ENST00000396060 BBS12Q6ZW61 710 aa12.43□□□□□ -0.42
GTF2A2-202ENST00000396060 DEFB128Q7Z7B8 93 aa12.43□□□□□ -0.42
GTF2A2-202ENST00000396060 UBE2Q1Q7Z7E8 422 aa12.43□□□□□ -0.42
GTF2A2-202ENST00000396060 JAMLQ86YT9 394 aa12.43□□□□□ -0.42
GTF2A2-202ENST00000396060 CCDC50Q8IVM0 306 aa12.43□□□□□ -0.42
GTF2A2-202ENST00000396060 ATL2Q8NHH9 583 aa12.43□□□□□ -0.42
GTF2A2-202ENST00000396060 CLEC4CQ8WTT0 213 aa12.43□□□□□ -0.42
GTF2A2-202ENST00000396060 FAM172AQ8WUF8 416 aa12.43□□□□□ -0.42
GTF2A2-202ENST00000396060 CASKIN2Q8WXE0 1202 aa12.43□□□□□ -0.42
GTF2A2-202ENST00000396060 CAVIN3Q969G5 261 aa12.43□□□□□ -0.42
GTF2A2-202ENST00000396060 ZNF689Q96CS4 500 aaPredicted RBP12.43□□□□□ -0.42
GTF2A2-202ENST00000396060 PGAP3Q96FM1 320 aaPredicted RBP12.43□□□□□ -0.42
GTF2A2-202ENST00000396060 CFAP57Q96MR6 1250 aa12.43□□□□□ -0.42
GTF2A2-202ENST00000396060 PEBP4Q96S96 227 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms