RNA–Protein interactions for RNA: ENST00000395978.7

BDNF-203, Transcript of brain derived neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 3,988 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-203ENST00000395978 SLC26A11Q86WA9 606 aa6.82□□□□□ -1.32
BDNF-203ENST00000395978 TFB1MQ8WVM0 346 aaKnown RBP6.82□□□□□ -1.32
BDNF-203ENST00000395978 CKAP2Q8WWK9 683 aa6.82□□□□□ -1.32
BDNF-203ENST00000395978 CCT6BQ92526 530 aa6.82□□□□□ -1.32
BDNF-203ENST00000395978 FAM111AQ96PZ2 611 aa6.82□□□□□ -1.32
BDNF-203ENST00000395978 C10orf88Q9H8K7 445 aa6.82□□□□□ -1.32
BDNF-203ENST00000395978 PLEKHA5Q9HAU0 1116 aa6.82□□□□□ -1.32
BDNF-203ENST00000395978 ZNF112Q9UJU3 913 aa6.82□□□□□ -1.32
BDNF-203ENST00000395978 AP4E1Q9UPM8 1137 aa6.82□□□□□ -1.32
BDNF-203ENST00000395978 MTO1Q9Y2Z2 717 aaKnown RBP6.82□□□□□ -1.32
BDNF-203ENST00000395978 SPDYE5A6NIY4 337 aa6.82□□□□□ -1.32
BDNF-203ENST00000395978 M0QYT0 321 aa6.82□□□□□ -1.32
BDNF-203ENST00000395978 ATP9BO43861 1147 aa6.82□□□□□ -1.32
BDNF-203ENST00000395978 VNN1O95497 513 aa6.82□□□□□ -1.32
BDNF-203ENST00000395978 RPL22P35268 128 aaKnown RBP6.82□□□□□ -1.32
BDNF-203ENST00000395978 SLC6A3Q01959 620 aa6.82□□□□□ -1.32
BDNF-203ENST00000395978 SP2Q02086 613 aa6.82□□□□□ -1.32
BDNF-203ENST00000395978 MAP3K10Q02779 954 aa6.82□□□□□ -1.32
BDNF-203ENST00000395978 DPYSL3Q14195 570 aa6.82□□□□□ -1.32
BDNF-203ENST00000395978 SMAD1Q15797 465 aaKnown RBP6.82□□□□□ -1.32
BDNF-203ENST00000395978 PTPN20Q4JDL3 420 aa6.82□□□□□ -1.32
BDNF-203ENST00000395978 MROH9Q5TGP6 573 aa6.82□□□□□ -1.32
BDNF-203ENST00000395978 ZDHHC24Q6UX98 284 aa6.82□□□□□ -1.32
BDNF-203ENST00000395978 ARMCX6Q7L4S7 300 aa6.82□□□□□ -1.32
BDNF-203ENST00000395978 FAM131BQ86XD5 332 aa6.82□□□□□ -1.32
BDNF-203ENST00000395978 ZDHHC17Q8IUH5 632 aa6.82□□□□□ -1.32
BDNF-203ENST00000395978 KIAA0319LQ8IZA0 1049 aa6.82□□□□□ -1.32
BDNF-203ENST00000395978 BBS5Q8N3I7 341 aa6.82□□□□□ -1.32
BDNF-203ENST00000395978 SLC7A14Q8TBB6 771 aa6.82□□□□□ -1.32
BDNF-203ENST00000395978 TLCD1Q96CP7 247 aa6.82□□□□□ -1.32
BDNF-203ENST00000395978 GPR88Q9GZN0 384 aa6.82□□□□□ -1.32
BDNF-203ENST00000395978 PDGFCQ9NRA1 345 aa6.82□□□□□ -1.32
BDNF-203ENST00000395978 PCMTD2Q9NV79 361 aa6.82□□□□□ -1.32
BDNF-203ENST00000395978 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP6.82□□□□□ -1.32
BDNF-203ENST00000395978 STOML1Q9UBI4 398 aa6.82□□□□□ -1.32
BDNF-203ENST00000395978 EFR3BQ9Y2G0 817 aa6.82□□□□□ -1.32
BDNF-203ENST00000395978 C2CD2Q9Y426 696 aa6.82□□□□□ -1.32
BDNF-203ENST00000395978 ALOX15BO15296 676 aa6.81□□□□□ -1.32
BDNF-203ENST00000395978 CTSHP09668 335 aa6.81□□□□□ -1.32
BDNF-203ENST00000395978 TGM2P21980 687 aa6.81□□□□□ -1.32
BDNF-203ENST00000395978 CA8P35219 290 aa6.81□□□□□ -1.32
BDNF-203ENST00000395978 FDFT1P37268 417 aa6.81□□□□□ -1.32
BDNF-203ENST00000395978 TCEAL1Q15170 157 aa6.81□□□□□ -1.32
BDNF-203ENST00000395978 GNASQ5JWF2 1037 aa6.81□□□□□ -1.32
BDNF-203ENST00000395978 C1orf220Q5T0J3 134 aa6.81□□□□□ -1.32
BDNF-203ENST00000395978 MFSD14CQ5VZR4 134 aa6.81□□□□□ -1.32
BDNF-203ENST00000395978 USP50Q70EL3 339 aaPredicted RBP6.81□□□□□ -1.32
BDNF-203ENST00000395978 PACS2Q86VP3 889 aa6.81□□□□□ -1.32
BDNF-203ENST00000395978 JOSD2Q8TAC2 188 aa6.81□□□□□ -1.32
BDNF-203ENST00000395978 E2F7Q96AV8 911 aa6.81□□□□□ -1.32
BDNF-203ENST00000395978 VPS39Q96JC1 886 aa6.81□□□□□ -1.32
BDNF-203ENST00000395978 NUDCD1Q96RS6 583 aa6.81□□□□□ -1.32
BDNF-203ENST00000395978 RXFP1Q9HBX9 757 aa6.81□□□□□ -1.32
BDNF-203ENST00000395978 SNCAIPQ9Y6H5 919 aa6.81□□□□□ -1.32
BDNF-203ENST00000395978 DOCK2Q92608 1830 aa6.81□□□□□ -1.32
BDNF-203ENST00000395978 TM9SF1O15321 606 aa6.81□□□□□ -1.32
BDNF-203ENST00000395978 MTSS1O43312 755 aa6.81□□□□□ -1.32
BDNF-203ENST00000395978 POLBP06746 335 aa6.81□□□□□ -1.32
BDNF-203ENST00000395978 NQO1P15559 274 aaKnown RBP6.81□□□□□ -1.32
BDNF-203ENST00000395978 ARF4P18085 180 aaPredicted RBP6.81□□□□□ -1.32
BDNF-203ENST00000395978 CYP2F1P24903 491 aa6.81□□□□□ -1.32
BDNF-203ENST00000395978 SH3D19Q5HYK7 790 aa6.81□□□□□ -1.32
BDNF-203ENST00000395978 BTBD8Q5XKL5 378 aa6.81□□□□□ -1.32
BDNF-203ENST00000395978 IQSEC1Q6DN90 963 aa6.81□□□□□ -1.32
BDNF-203ENST00000395978 MTHFD1LQ6UB35 978 aa6.81□□□□□ -1.32
BDNF-203ENST00000395978 NLRP9Q7RTR0 991 aa6.81□□□□□ -1.32
BDNF-203ENST00000395978 RASSF3Q86WH2 238 aa6.81□□□□□ -1.32
BDNF-203ENST00000395978 ADGRF2Q8IZF7 708 aa6.81□□□□□ -1.32
BDNF-203ENST00000395978 SHCBP1Q8NEM2 672 aa6.81□□□□□ -1.32
BDNF-203ENST00000395978 PIK3R5Q8WYR1 880 aa6.81□□□□□ -1.32
BDNF-203ENST00000395978 N4BP2L2Q92802 583 aaPredicted RBP6.81□□□□□ -1.32
BDNF-203ENST00000395978 NKD2Q969F2 451 aaPredicted RBP6.81□□□□□ -1.32
BDNF-203ENST00000395978 NAT9Q9BTE0 207 aa6.81□□□□□ -1.32
BDNF-203ENST00000395978 CCDC68Q9H2F9 335 aa6.81□□□□□ -1.32
BDNF-203ENST00000395978 VCX3BQ9H321 246 aa6.81□□□□□ -1.32
BDNF-203ENST00000395978 GRID1Q9ULK0 1009 aa6.81□□□□□ -1.32
BDNF-203ENST00000395978 PCDHGC3Q9UN70 934 aa6.81□□□□□ -1.32
BDNF-203ENST00000395978 ARAP2Q8WZ64 1704 aa6.81□□□□□ -1.32
BDNF-203ENST00000395978 CYB561D2O14569 222 aa6.81□□□□□ -1.32
BDNF-203ENST00000395978 MSCO60682 206 aa6.81□□□□□ -1.32
BDNF-203ENST00000395978 PAMP19021 973 aa6.81□□□□□ -1.32
BDNF-203ENST00000395978 ARPP19P56211 112 aa6.81□□□□□ -1.32
BDNF-203ENST00000395978 OVGP1Q12889 678 aa6.81□□□□□ -1.32
BDNF-203ENST00000395978 ACVR2BQ13705 512 aa6.81□□□□□ -1.32
BDNF-203ENST00000395978 C15orf59Q2T9L4 293 aaPredicted RBP6.81□□□□□ -1.32
BDNF-203ENST00000395978 UNC93AQ86WB7 457 aa6.81□□□□□ -1.32
BDNF-203ENST00000395978 CCNJLQ8IV13 435 aa6.81□□□□□ -1.32
BDNF-203ENST00000395978 ARMC2Q8NEN0 867 aa6.81□□□□□ -1.32
BDNF-203ENST00000395978 FNIP1Q8TF40 1166 aa6.81□□□□□ -1.32
BDNF-203ENST00000395978 NOD2Q9HC29 1040 aa6.81□□□□□ -1.32
BDNF-203ENST00000395978 A0A1B0GUL6 1792 aa6.81□□□□□ -1.32
BDNF-203ENST00000395978 TAF1LQ8IZX4 1826 aa6.81□□□□□ -1.32
BDNF-203ENST00000395978 GOLGA8QA0A0J9YX86 632 aa6.8□□□□□ -1.32
BDNF-203ENST00000395978 C17orf102A2RUQ5 167 aa6.8□□□□□ -1.32
BDNF-203ENST00000395978 GOLGA8OA6NCC3 632 aa6.8□□□□□ -1.32
BDNF-203ENST00000395978 SDR42E2A6NKP2 422 aa6.8□□□□□ -1.32
BDNF-203ENST00000395978 C3orf70A6NLC5 250 aaPredicted RBP6.8□□□□□ -1.32
BDNF-203ENST00000395978 GOLGA8NF8WBI6 632 aa6.8□□□□□ -1.32
BDNF-203ENST00000395978 AP3B1O00203 1094 aa6.8□□□□□ -1.32
BDNF-203ENST00000395978 TULP2O00295 520 aa6.8□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms