RNA–Protein interactions for RNA: ENST00000394989.6

SNCA-204, Transcript of synuclein alpha, humanhuman

TSL 1 (best) BASIC

Gene SNCA, Length 3,167 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-204ENST00000394989 CDH16O75309 829 aa14.59□□□□□ -0.07
SNCA-204ENST00000394989 IFNAR2P48551 515 aa14.59□□□□□ -0.07
SNCA-204ENST00000394989 CDH6P55285 790 aa14.59□□□□□ -0.07
SNCA-204ENST00000394989 STAT4Q14765 748 aa14.59□□□□□ -0.07
SNCA-204ENST00000394989 STILQ15468 1287 aa14.59□□□□□ -0.07
SNCA-204ENST00000394989 YTHDF3Q7Z739 585 aaKnown RBP14.59□□□□□ -0.07
SNCA-204ENST00000394989 ZBED8Q8IZ13 594 aa14.59□□□□□ -0.07
SNCA-204ENST00000394989 NAT8LQ8N9F0 302 aa14.59□□□□□ -0.07
SNCA-204ENST00000394989 WDR83Q9BRX9 315 aaKnown RBP14.59□□□□□ -0.07
SNCA-204ENST00000394989 ADAM33Q9BZ11 813 aa14.59□□□□□ -0.07
SNCA-204ENST00000394989 FRMD8P1Q9BZ68 369 aaPredicted RBP14.59□□□□□ -0.07
SNCA-204ENST00000394989 TRIM6Q9C030 488 aaPredicted RBP14.59□□□□□ -0.07
SNCA-204ENST00000394989 RSAD1Q9HA92 442 aa14.59□□□□□ -0.07
SNCA-204ENST00000394989 RRAGCQ9HB90 399 aa14.59□□□□□ -0.07
SNCA-204ENST00000394989 GOLGA2P5Q9HBQ8 144 aa14.59□□□□□ -0.07
SNCA-204ENST00000394989 BAIAP2L1Q9UHR4 511 aa14.59□□□□□ -0.07
SNCA-204ENST00000394989 ALOX15BO15296 676 aa14.59□□□□□ -0.07
SNCA-204ENST00000394989 TFE3P19532 575 aaPredicted RBP14.59□□□□□ -0.07
SNCA-204ENST00000394989 LMO2P25791 158 aa14.59□□□□□ -0.07
SNCA-204ENST00000394989 SOX4Q06945 474 aaPredicted RBP14.59□□□□□ -0.07
SNCA-204ENST00000394989 PCBP1Q15365 356 aaKnown RBP eCLIP14.59□□□□□ -0.07
SNCA-204ENST00000394989 MSS51Q4VC12 460 aa14.59□□□□□ -0.07
SNCA-204ENST00000394989 TAB3Q8N5C8 712 aaPredicted RBP14.59□□□□□ -0.07
SNCA-204ENST00000394989 FAM71DQ8N9W8 422 aa14.59□□□□□ -0.07
SNCA-204ENST00000394989 OR6B3Q8NGW1 331 aa14.59□□□□□ -0.07
SNCA-204ENST00000394989 SPATA18Q8TC71 538 aa14.59□□□□□ -0.07
SNCA-204ENST00000394989 CLEC4CQ8WTT0 213 aa14.59□□□□□ -0.07
SNCA-204ENST00000394989 MAML1Q92585 1016 aa14.59□□□□□ -0.07
SNCA-204ENST00000394989 USP6NLQ92738 828 aa14.59□□□□□ -0.07
SNCA-204ENST00000394989 PSEN2P49810 448 aa14.58□□□□□ -0.08
SNCA-204ENST00000394989 EIF3EP60228 445 aaKnown RBP14.58□□□□□ -0.08
SNCA-204ENST00000394989 SLC6A3Q01959 620 aa14.58□□□□□ -0.08
SNCA-204ENST00000394989 ZC3H12AQ5D1E8 599 aaKnown RBP14.58□□□□□ -0.08
SNCA-204ENST00000394989 FNBP1LQ5T0N5 605 aa14.58□□□□□ -0.08
SNCA-204ENST00000394989 CPLX4Q7Z7G2 160 aa14.58□□□□□ -0.08
SNCA-204ENST00000394989 LRRC34Q8IZ02 419 aa14.58□□□□□ -0.08
SNCA-204ENST00000394989 DPYSL4O14531 572 aa14.58□□□□□ -0.08
SNCA-204ENST00000394989 HGSO14964 777 aaPredicted RBP14.58□□□□□ -0.08
SNCA-204ENST00000394989 RBP3P10745 1247 aa14.58□□□□□ -0.08
SNCA-204ENST00000394989 CCDC130P13994 396 aa14.58□□□□□ -0.08
SNCA-204ENST00000394989 GBP2P32456 591 aaPredicted RBP14.58□□□□□ -0.08
SNCA-204ENST00000394989 FBXO47Q5MNV8 452 aa14.58□□□□□ -0.08
SNCA-204ENST00000394989 APBB1IPQ7Z5R6 666 aaPredicted RBP14.58□□□□□ -0.08
SNCA-204ENST00000394989 ARRDC4Q8NCT1 418 aa14.58□□□□□ -0.08
SNCA-204ENST00000394989 MGARPQ8TDB4 240 aa14.58□□□□□ -0.08
SNCA-204ENST00000394989 RSAD2Q8WXG1 361 aa14.58□□□□□ -0.08
SNCA-204ENST00000394989 GPATCH2LQ9NWQ4 482 aa14.58□□□□□ -0.08
SNCA-204ENST00000394989 TMEM63AO94886 807 aa14.57□□□□□ -0.08
SNCA-204ENST00000394989 ATP5DP30049 168 aa14.57□□□□□ -0.08
SNCA-204ENST00000394989 GPX6P59796 221 aa14.57□□□□□ -0.08
SNCA-204ENST00000394989 PDIA2Q13087 525 aaKnown RBP14.57□□□□□ -0.08
SNCA-204ENST00000394989 IRF5Q13568 498 aa14.57□□□□□ -0.08
SNCA-204ENST00000394989 CA9Q16790 459 aa14.57□□□□□ -0.08
SNCA-204ENST00000394989 XKR4Q5GH76 650 aa14.57□□□□□ -0.08
SNCA-204ENST00000394989 CAPN12Q6ZSI9 719 aa14.57□□□□□ -0.08
SNCA-204ENST00000394989 MICALCLQ6ZW33 695 aa14.57□□□□□ -0.08
SNCA-204ENST00000394989 UNC93AQ86WB7 457 aa14.57□□□□□ -0.08
SNCA-204ENST00000394989 PPIL6Q8IXY8 311 aa14.57□□□□□ -0.08
SNCA-204ENST00000394989 FAM172AQ8WUF8 416 aa14.57□□□□□ -0.08
SNCA-204ENST00000394989 MIEF2Q96C03 454 aa14.57□□□□□ -0.08
SNCA-204ENST00000394989 MIS12Q9H081 205 aa14.57□□□□□ -0.08
SNCA-204ENST00000394989 MLXIPLQ9NP71 852 aa14.57□□□□□ -0.08
SNCA-204ENST00000394989 UBQLN1Q9UMX0 589 aaKnown RBP14.57□□□□□ -0.08
SNCA-204ENST00000394989 A8MXQ7 604 aa14.57□□□□□ -0.08
SNCA-204ENST00000394989 PRPSAP2O60256 369 aa14.57□□□□□ -0.08
SNCA-204ENST00000394989 PDGFRBP09619 1106 aa14.57□□□□□ -0.08
SNCA-204ENST00000394989 BRAFP15056 766 aa14.57□□□□□ -0.08
SNCA-204ENST00000394989 MTM1Q13496 603 aa14.57□□□□□ -0.08
SNCA-204ENST00000394989 NOMO1Q15155 1222 aa14.57□□□□□ -0.08
SNCA-204ENST00000394989 GKAP1Q5VSY0 366 aaPredicted RBP14.57□□□□□ -0.08
SNCA-204ENST00000394989 ARHGAP17Q68EM7 881 aa14.57□□□□□ -0.08
SNCA-204ENST00000394989 CEP128Q6ZU80 1094 aa14.57□□□□□ -0.08
SNCA-204ENST00000394989 ZC3H18Q86VM9 953 aaKnown RBP14.57□□□□□ -0.08
SNCA-204ENST00000394989 TTC25Q96NG3 672 aa14.57□□□□□ -0.08
SNCA-204ENST00000394989 CLUHO75153 1309 aa14.57□□□□□ -0.08
SNCA-204ENST00000394989 EXOC1LA0A1B0GW35 172 aa14.57□□□□□ -0.08
SNCA-204ENST00000394989 KPNA7A9QM74 516 aa14.57□□□□□ -0.08
SNCA-204ENST00000394989 IGHA2P01877 340 aa14.57□□□□□ -0.08
SNCA-204ENST00000394989 MYL3P08590 195 aa14.57□□□□□ -0.08
SNCA-204ENST00000394989 AXLP30530 894 aa14.57□□□□□ -0.08
SNCA-204ENST00000394989 HDAC4P56524 1084 aa14.57□□□□□ -0.08
SNCA-204ENST00000394989 ADCY1Q08828 1119 aa14.57□□□□□ -0.08
SNCA-204ENST00000394989 HIF1AQ16665 826 aa14.57□□□□□ -0.08
SNCA-204ENST00000394989 CENPUQ71F23 418 aa14.57□□□□□ -0.08
SNCA-204ENST00000394989 ANKMY2Q8IV38 441 aa14.57□□□□□ -0.08
SNCA-204ENST00000394989 SRRM1Q8IYB3 904 aaKnown RBP14.57□□□□□ -0.08
SNCA-204ENST00000394989 C7orf31Q8N865 590 aa14.57□□□□□ -0.08
SNCA-204ENST00000394989 SMG8Q8ND04 991 aaKnown RBP14.57□□□□□ -0.08
SNCA-204ENST00000394989 THOC1Q96FV9 657 aaKnown RBP14.57□□□□□ -0.08
SNCA-204ENST00000394989 RNF157Q96PX1 679 aa14.57□□□□□ -0.08
SNCA-204ENST00000394989 NGRNQ9NPE2 291 aaKnown RBP14.57□□□□□ -0.08
SNCA-204ENST00000394989 UBN1Q9NPG3 1134 aa14.57□□□□□ -0.08
SNCA-204ENST00000394989 MCF2LO15068 1137 aa14.56□□□□□ -0.08
SNCA-204ENST00000394989 SETSIPP0DME0 302 aa14.56□□□□□ -0.08
SNCA-204ENST00000394989 CYP2B6P20813 491 aa14.56□□□□□ -0.08
SNCA-204ENST00000394989 HUNKP57058 714 aa14.56□□□□□ -0.08
SNCA-204ENST00000394989 SCYL2Q6P3W7 929 aa14.56□□□□□ -0.08
SNCA-204ENST00000394989 PIGWQ7Z7B1 504 aa14.56□□□□□ -0.08
SNCA-204ENST00000394989 PCGF5Q86SE9 256 aa14.56□□□□□ -0.08
SNCA-204ENST00000394989 SESTD1Q86VW0 696 aa14.56□□□□□ -0.08
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