RNA–Protein interactions for RNA: ENST00000394597.6

RFFL-202, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RFFL, Length 4,227 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-202ENST00000394597 APPL2Q8NEU8 664 aa5.92□□□□□ -1.46
RFFL-202ENST00000394597 NSL1Q96IY1 281 aa5.92□□□□□ -1.46
RFFL-202ENST00000394597 OSMRQ99650 979 aa5.92□□□□□ -1.46
RFFL-202ENST00000394597 TBC1D10AQ9BXI6 508 aa5.92□□□□□ -1.46
RFFL-202ENST00000394597 CALN1Q9BXU9 219 aa5.92□□□□□ -1.46
RFFL-202ENST00000394597 PHTF1Q9UMS5 762 aa5.92□□□□□ -1.46
RFFL-202ENST00000394597 A0A1B0GVG6 124 aa5.92□□□□□ -1.46
RFFL-202ENST00000394597 TRIM43BA6NCK2 446 aa5.92□□□□□ -1.46
RFFL-202ENST00000394597 RCCD1A6NED2 376 aa5.92□□□□□ -1.46
RFFL-202ENST00000394597 FAM47DPA6NHR8 397 aa5.92□□□□□ -1.46
RFFL-202ENST00000394597 COQ9O75208 318 aa5.92□□□□□ -1.46
RFFL-202ENST00000394597 CDH16O75309 829 aa5.92□□□□□ -1.46
RFFL-202ENST00000394597 LCA5LO95447 670 aa5.92□□□□□ -1.46
RFFL-202ENST00000394597 ENO1P06733 434 aaKnown RBP5.92□□□□□ -1.46
RFFL-202ENST00000394597 CHRNA3P32297 505 aa5.92□□□□□ -1.46
RFFL-202ENST00000394597 CCNFP41002 786 aa5.92□□□□□ -1.46
RFFL-202ENST00000394597 MYL6P60660 151 aa5.92□□□□□ -1.46
RFFL-202ENST00000394597 DLG4P78352 724 aa5.92□□□□□ -1.46
RFFL-202ENST00000394597 NR1H3Q13133 447 aa5.92□□□□□ -1.46
RFFL-202ENST00000394597 LIN52Q52LA3 116 aa5.92□□□□□ -1.46
RFFL-202ENST00000394597 EPC2Q52LR7 807 aa5.92□□□□□ -1.46
RFFL-202ENST00000394597 KIAA1841Q6NSI8 718 aa5.92□□□□□ -1.46
RFFL-202ENST00000394597 CCDC137Q6PK04 289 aaKnown RBP5.92□□□□□ -1.46
RFFL-202ENST00000394597 RINLQ6ZS11 566 aa5.92□□□□□ -1.46
RFFL-202ENST00000394597 SIX5Q8N196 739 aa5.92□□□□□ -1.46
RFFL-202ENST00000394597 ARRDC4Q8NCT1 418 aa5.92□□□□□ -1.46
RFFL-202ENST00000394597 TTC8Q8TAM2 541 aa5.92□□□□□ -1.46
RFFL-202ENST00000394597 TTC17Q96AE7 1141 aa5.92□□□□□ -1.46
RFFL-202ENST00000394597 APBA2Q99767 749 aa5.92□□□□□ -1.46
RFFL-202ENST00000394597 ROPN1BQ9BZX4 212 aaPredicted RBP5.92□□□□□ -1.46
RFFL-202ENST00000394597 UBE2OQ9C0C9 1292 aaKnown RBP5.92□□□□□ -1.46
RFFL-202ENST00000394597 MRPL46Q9H2W6 279 aaKnown RBP5.92□□□□□ -1.46
RFFL-202ENST00000394597 ASB7Q9H672 318 aa5.92□□□□□ -1.46
RFFL-202ENST00000394597 ROPN1Q9HAT0 212 aaPredicted RBP5.92□□□□□ -1.46
RFFL-202ENST00000394597 NGRNQ9NPE2 291 aaKnown RBP5.92□□□□□ -1.46
RFFL-202ENST00000394597 SPATA7Q9P0W8 599 aa5.92□□□□□ -1.46
RFFL-202ENST00000394597 ATP11BQ9Y2G3 1177 aa5.92□□□□□ -1.46
RFFL-202ENST00000394597 REXO2Q9Y3B8 237 aaKnown RBP5.92□□□□□ -1.46
RFFL-202ENST00000394597 LAMA4Q16363 1823 aa5.92□□□□□ -1.46
RFFL-202ENST00000394597 ANKRD33BA6NCL7 494 aa5.91□□□□□ -1.46
RFFL-202ENST00000394597 LPXNO60711 386 aa5.91□□□□□ -1.46
RFFL-202ENST00000394597 KRT3P12035 628 aa5.91□□□□□ -1.46
RFFL-202ENST00000394597 ADORA2BP29275 332 aa5.91□□□□□ -1.46
RFFL-202ENST00000394597 ATICP31939 592 aa5.91□□□□□ -1.46
RFFL-202ENST00000394597 PNPLA4P41247 253 aa5.91□□□□□ -1.46
RFFL-202ENST00000394597 PPM1FP49593 454 aaPredicted RBP5.91□□□□□ -1.46
RFFL-202ENST00000394597 BEX3Q00994 111 aa5.91□□□□□ -1.46
RFFL-202ENST00000394597 HIC1Q14526 733 aa5.91□□□□□ -1.46
RFFL-202ENST00000394597 TRADDQ15628 312 aa5.91□□□□□ -1.46
RFFL-202ENST00000394597 SV2CQ496J9 727 aa5.91□□□□□ -1.46
RFFL-202ENST00000394597 TAF1BQ53T94 588 aaPredicted RBP5.91□□□□□ -1.46
RFFL-202ENST00000394597 MDH1BQ5I0G3 518 aa5.91□□□□□ -1.46
RFFL-202ENST00000394597 C1orf228Q6PIY5 440 aa5.91□□□□□ -1.46
RFFL-202ENST00000394597 NLRP9Q7RTR0 991 aa5.91□□□□□ -1.46
RFFL-202ENST00000394597 FBXO25Q8TCJ0 367 aa5.91□□□□□ -1.46
RFFL-202ENST00000394597 ATXN2LQ8WWM7 1075 aaKnown RBP5.91□□□□□ -1.46
RFFL-202ENST00000394597 PPWD1Q96BP3 646 aaKnown RBP5.91□□□□□ -1.46
RFFL-202ENST00000394597 MED15Q96RN5 788 aa5.91□□□□□ -1.46
RFFL-202ENST00000394597 MYLK2Q9H1R3 596 aa5.91□□□□□ -1.46
RFFL-202ENST00000394597 DHX33Q9H6R0 707 aaKnown RBP5.91□□□□□ -1.46
RFFL-202ENST00000394597 CYP4F11Q9HBI6 524 aa5.91□□□□□ -1.46
RFFL-202ENST00000394597 TXNRD2Q9NNW7 524 aa5.91□□□□□ -1.46
RFFL-202ENST00000394597 ARHGEF38Q9NXL2 777 aa5.91□□□□□ -1.46
RFFL-202ENST00000394597 EURLQ9NYK6 297 aa5.91□□□□□ -1.46
RFFL-202ENST00000394597 WRAP73Q9P2S5 460 aaPredicted RBP5.91□□□□□ -1.46
RFFL-202ENST00000394597 TNFSF13BQ9Y275 285 aa5.91□□□□□ -1.46
RFFL-202ENST00000394597 ALG6Q9Y672 507 aa5.91□□□□□ -1.46
RFFL-202ENST00000394597 TAF1LQ8IZX4 1826 aa5.91□□□□□ -1.46
RFFL-202ENST00000394597 H3BRJ5 948 aa5.91□□□□□ -1.46
RFFL-202ENST00000394597 MAN1A2O60476 641 aa5.91□□□□□ -1.46
RFFL-202ENST00000394597 WFS1O76024 890 aa5.91□□□□□ -1.46
RFFL-202ENST00000394597 PGM3O95394 542 aa5.91□□□□□ -1.46
RFFL-202ENST00000394597 KRT7P08729 469 aa5.91□□□□□ -1.46
RFFL-202ENST00000394597 CXCL8P10145 99 aa5.91□□□□□ -1.46
RFFL-202ENST00000394597 RARAP10276 462 aa5.91□□□□□ -1.46
RFFL-202ENST00000394597 AXLP30530 894 aa5.91□□□□□ -1.46
RFFL-202ENST00000394597 SDC4P31431 198 aa5.91□□□□□ -1.46
RFFL-202ENST00000394597 ARL4AP40617 200 aa5.91□□□□□ -1.46
RFFL-202ENST00000394597 ARPP19P56211 112 aa5.91□□□□□ -1.46
RFFL-202ENST00000394597 PTENP60484 403 aa5.91□□□□□ -1.46
RFFL-202ENST00000394597 SP3Q02447 781 aa5.91□□□□□ -1.46
RFFL-202ENST00000394597 GCNT1Q02742 428 aa5.91□□□□□ -1.46
RFFL-202ENST00000394597 GSTA3Q16772 222 aa5.91□□□□□ -1.46
RFFL-202ENST00000394597 CDO1Q16878 200 aa5.91□□□□□ -1.46
RFFL-202ENST00000394597 CCDC14Q49A88 953 aa5.91□□□□□ -1.46
RFFL-202ENST00000394597 LDLRAD1Q5T700 205 aa5.91□□□□□ -1.46
RFFL-202ENST00000394597 FAM102AQ5T9C2 384 aaPredicted RBP5.91□□□□□ -1.46
RFFL-202ENST00000394597 GPAT2Q6NUI2 795 aa5.91□□□□□ -1.46
RFFL-202ENST00000394597 JAMLQ86YT9 394 aa5.91□□□□□ -1.46
RFFL-202ENST00000394597 ARHGEF19Q8IW93 802 aa5.91□□□□□ -1.46
RFFL-202ENST00000394597 C1orf131Q8NDD1 294 aaKnown RBP5.91□□□□□ -1.46
RFFL-202ENST00000394597 UCMAQ8WVF2 138 aa5.91□□□□□ -1.46
RFFL-202ENST00000394597 ACO2Q99798 780 aaKnown RBP5.91□□□□□ -1.46
RFFL-202ENST00000394597 NTPCRQ9BSD7 190 aaKnown RBP5.91□□□□□ -1.46
RFFL-202ENST00000394597 XPNPEP3Q9NQH7 507 aa5.91□□□□□ -1.46
RFFL-202ENST00000394597 KLK14Q9P0G3 267 aa5.91□□□□□ -1.46
RFFL-202ENST00000394597 GTF3C4Q9UKN8 822 aa5.91□□□□□ -1.46
RFFL-202ENST00000394597 KIAA1257Q9ULG3 409 aa5.91□□□□□ -1.46
RFFL-202ENST00000394597 RNF225M0QZC1 329 aaPredicted RBP5.91□□□□□ -1.46
RFFL-202ENST00000394597 SGK1O00141 431 aa5.91□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms