RNA–Protein interactions for RNA: ENST00000393091.6

USP44-202, Transcript of ubiquitin specific peptidase 44, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP44, Length 3,161 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP44-202ENST00000393091 TNFAIP3P21580 790 aa13.97□□□□□ -0.17
USP44-202ENST00000393091 PTPN20Q4JDL3 420 aa13.97□□□□□ -0.17
USP44-202ENST00000393091 GPRIN1Q7Z2K8 1008 aa13.97□□□□□ -0.17
USP44-202ENST00000393091 MON1AQ86VX9 555 aa13.97□□□□□ -0.17
USP44-202ENST00000393091 MCOLN2Q8IZK6 566 aa13.97□□□□□ -0.17
USP44-202ENST00000393091 CPXM1Q96SM3 734 aa13.97□□□□□ -0.17
USP44-202ENST00000393091 RRN3Q9NYV6 651 aa13.97□□□□□ -0.17
USP44-202ENST00000393091 DNMT3BQ9UBC3 853 aaKnown RBP13.97□□□□□ -0.17
USP44-202ENST00000393091 KIAA1549LQ6ZVL6 1849 aa13.97□□□□□ -0.17
USP44-202ENST00000393091 A0A0A6YYK5 440 aaPredicted RBP13.96□□□□□ -0.17
USP44-202ENST00000393091 DPYSL4O14531 572 aa13.96□□□□□ -0.17
USP44-202ENST00000393091 PER2O15055 1255 aa13.96□□□□□ -0.17
USP44-202ENST00000393091 IGLV3-25P01717 112 aa13.96□□□□□ -0.17
USP44-202ENST00000393091 EIF4A3P38919 411 aaKnown RBP13.96□□□□□ -0.17
USP44-202ENST00000393091 MRPS5P82675 430 aaKnown RBP13.96□□□□□ -0.17
USP44-202ENST00000393091 OBP2AQ9NY56 170 aa13.96□□□□□ -0.17
USP44-202ENST00000393091 TMEM59LQ9UK28 342 aa13.96□□□□□ -0.17
USP44-202ENST00000393091 SLC27A5Q9Y2P5 690 aa13.96□□□□□ -0.17
USP44-202ENST00000393091 ENDOD1O94919 500 aa13.96□□□□□ -0.17
USP44-202ENST00000393091 YWHAQP27348 245 aa13.96□□□□□ -0.17
USP44-202ENST00000393091 GTF2F1P35269 517 aaKnown RBP eCLIP13.96□□□□□ -0.17
USP44-202ENST00000393091 MGAT5BQ3V5L5 792 aa13.96□□□□□ -0.17
USP44-202ENST00000393091 FNIP1Q8TF40 1166 aa13.96□□□□□ -0.17
USP44-202ENST00000393091 ZNF512Q96ME7 567 aaPredicted RBP13.96□□□□□ -0.17
USP44-202ENST00000393091 PGLYRP2Q96PD5 576 aa13.96□□□□□ -0.17
USP44-202ENST00000393091 IRX2Q9BZI1 471 aaPredicted RBP13.96□□□□□ -0.17
USP44-202ENST00000393091 CD207Q9UJ71 328 aa13.96□□□□□ -0.17
USP44-202ENST00000393091 CCDC195A0A1B0GUA6 201 aa13.95□□□□□ -0.18
USP44-202ENST00000393091 ZBED1O96006 694 aa13.95□□□□□ -0.18
USP44-202ENST00000393091 OAS1P00973 400 aaKnown RBP13.95□□□□□ -0.18
USP44-202ENST00000393091 USP8P40818 1118 aa13.95□□□□□ -0.18
USP44-202ENST00000393091 GPR15P49685 360 aa13.95□□□□□ -0.18
USP44-202ENST00000393091 CCZ1BP86790 482 aa13.95□□□□□ -0.18
USP44-202ENST00000393091 CCZ1P86791 482 aaPredicted RBP13.95□□□□□ -0.18
USP44-202ENST00000393091 DDR2Q16832 855 aa13.95□□□□□ -0.18
USP44-202ENST00000393091 Q7L0L9 218 aa13.95□□□□□ -0.18
USP44-202ENST00000393091 C3orf20Q8ND61 904 aa13.95□□□□□ -0.18
USP44-202ENST00000393091 RIPOR3Q96MK2 946 aa13.95□□□□□ -0.18
USP44-202ENST00000393091 CHP1Q99653 195 aa13.95□□□□□ -0.18
USP44-202ENST00000393091 UBE2ZQ9H832 354 aaPredicted RBP13.95□□□□□ -0.18
USP44-202ENST00000393091 ZNF334Q9HCZ1 680 aaPredicted RBP13.95□□□□□ -0.18
USP44-202ENST00000393091 EPS15L1Q9UBC2 864 aa13.95□□□□□ -0.18
USP44-202ENST00000393091 USTQ9Y2C2 406 aa13.95□□□□□ -0.18
USP44-202ENST00000393091 COL4A3Q01955 1670 aa13.95□□□□□ -0.18
USP44-202ENST00000393091 A0A087X0T9 212 aa13.95□□□□□ -0.18
USP44-202ENST00000393091 TULP2O00295 520 aa13.95□□□□□ -0.18
USP44-202ENST00000393091 PAPSS1O43252 624 aaPredicted RBP13.95□□□□□ -0.18
USP44-202ENST00000393091 FAM228BP0C875 321 aa13.95□□□□□ -0.18
USP44-202ENST00000393091 SLC6A3Q01959 620 aa13.95□□□□□ -0.18
USP44-202ENST00000393091 GLYCTKQ8IVS8 523 aa13.95□□□□□ -0.18
USP44-202ENST00000393091 UBA3Q8TBC4 463 aa13.95□□□□□ -0.18
USP44-202ENST00000393091 SEPT5Q99719 369 aaPredicted RBP13.95□□□□□ -0.18
USP44-202ENST00000393091 BAG1Q99933 345 aaPredicted RBP13.95□□□□□ -0.18
USP44-202ENST00000393091 ANKRD62A6NC57 917 aa13.95□□□□□ -0.18
USP44-202ENST00000393091 DAB1O75553 588 aa13.95□□□□□ -0.18
USP44-202ENST00000393091 CALCAP01258 141 aa13.95□□□□□ -0.18
USP44-202ENST00000393091 PLEKP08567 350 aaPredicted RBP13.95□□□□□ -0.18
USP44-202ENST00000393091 TMEM253P0C7T8 217 aa13.95□□□□□ -0.18
USP44-202ENST00000393091 SKILP12757 684 aa13.95□□□□□ -0.18
USP44-202ENST00000393091 USP46P62068 366 aa13.95□□□□□ -0.18
USP44-202ENST00000393091 MTA1Q13330 715 aa13.95□□□□□ -0.18
USP44-202ENST00000393091 EFHC1Q5JVL4 640 aa13.95□□□□□ -0.18
USP44-202ENST00000393091 SCD5Q86SK9 330 aa13.95□□□□□ -0.18
USP44-202ENST00000393091 CPLX3Q8WVH0 158 aa13.95□□□□□ -0.18
USP44-202ENST00000393091 OLA1Q9NTK5 396 aaKnown RBP13.95□□□□□ -0.18
USP44-202ENST00000393091 ZNF840PA6NDX5 716 aa13.94□□□□□ -0.18
USP44-202ENST00000393091 SIGLEC16A6NMB1 481 aa13.94□□□□□ -0.18
USP44-202ENST00000393091 ARHGAP6O43182 974 aa13.94□□□□□ -0.18
USP44-202ENST00000393091 ARPP19P56211 112 aa13.94□□□□□ -0.18
USP44-202ENST00000393091 SLC7A9P82251 487 aa13.94□□□□□ -0.18
USP44-202ENST00000393091 ERICH1Q86X53 443 aa13.94□□□□□ -0.18
USP44-202ENST00000393091 CENPIQ92674 756 aaPredicted RBP13.94□□□□□ -0.18
USP44-202ENST00000393091 C18orf8Q96DM3 657 aa13.94□□□□□ -0.18
USP44-202ENST00000393091 GDE1Q9NZC3 331 aa13.94□□□□□ -0.18
USP44-202ENST00000393091 ZNF263O14978 683 aa13.94□□□□□ -0.18
USP44-202ENST00000393091 CYLC1P35663 651 aaPredicted RBP13.94□□□□□ -0.18
USP44-202ENST00000393091 TKTL1P51854 596 aa13.94□□□□□ -0.18
USP44-202ENST00000393091 PLCB2Q00722 1185 aa13.94□□□□□ -0.18
USP44-202ENST00000393091 HS1BP3Q53T59 392 aa13.94□□□□□ -0.18
USP44-202ENST00000393091 NIPA2Q8N8Q9 360 aa13.94□□□□□ -0.18
USP44-202ENST00000393091 ANP32BQ92688 251 aaKnown RBP13.94□□□□□ -0.18
USP44-202ENST00000393091 ASAH2Q9NR71 780 aa13.94□□□□□ -0.18
USP44-202ENST00000393091 TLR8Q9NR97 1041 aaKnown RBP13.94□□□□□ -0.18
USP44-202ENST00000393091 IGLV3-27P01718 113 aa13.93□□□□□ -0.18
USP44-202ENST00000393091 NSFP46459 744 aaKnown RBP13.93□□□□□ -0.18
USP44-202ENST00000393091 ACAP1Q15027 740 aa13.93□□□□□ -0.18
USP44-202ENST00000393091 GAREM2Q75VX8 874 aa13.93□□□□□ -0.18
USP44-202ENST00000393091 IPO4Q8TEX9 1081 aaKnown RBP13.93□□□□□ -0.18
USP44-202ENST00000393091 AZIN2Q96A70 460 aa13.93□□□□□ -0.18
USP44-202ENST00000393091 ABCC13Q9NSE7 274 aa13.93□□□□□ -0.18
USP44-202ENST00000393091 MTPAPQ9NVV4 582 aaKnown RBP eCLIP13.93□□□□□ -0.18
USP44-202ENST00000393091 E5RJQ4 531 aa13.93□□□□□ -0.18
USP44-202ENST00000393091 MBTPS2O43462 519 aa13.93□□□□□ -0.18
USP44-202ENST00000393091 HSF2BPO75031 334 aa13.93□□□□□ -0.18
USP44-202ENST00000393091 NDUFA10O95299 355 aa13.93□□□□□ -0.18
USP44-202ENST00000393091 FYNP06241 537 aa13.93□□□□□ -0.18
USP44-202ENST00000393091 RHOP08100 348 aa13.93□□□□□ -0.18
USP44-202ENST00000393091 PTPN9P43378 593 aa13.93□□□□□ -0.18
USP44-202ENST00000393091 CBX2Q14781 532 aaPredicted RBP13.93□□□□□ -0.18
USP44-202ENST00000393091 SMAD2Q15796 467 aaKnown RBP13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms