RNA–Protein interactions for RNA: ENST00000390009.7

ACTN4-202, Transcript of actinin alpha 4, humanhuman

TSL 1 (best) BASIC

Gene ACTN4, Length 2,102 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-202ENST00000390009 BOLA3Q53S33 107 aa19.02■□□□□ 0.64
ACTN4-202ENST00000390009 C6orf118Q5T5N4 469 aa19.02■□□□□ 0.64
ACTN4-202ENST00000390009 ZCCHC9Q8N567 271 aaKnown RBP19.02■□□□□ 0.64
ACTN4-202ENST00000390009 EPS8L3Q8TE67 593 aaKnown RBP19.02■□□□□ 0.64
ACTN4-202ENST00000390009 HSFY1Q96LI6 401 aa19.02■□□□□ 0.64
ACTN4-202ENST00000390009 MAK16Q9BXY0 300 aaKnown RBP19.02■□□□□ 0.64
ACTN4-202ENST00000390009 MIOSQ9NXC5 875 aa19.02■□□□□ 0.64
ACTN4-202ENST00000390009 RNF186Q9NXI6 227 aa19.02■□□□□ 0.64
ACTN4-202ENST00000390009 TPX2Q9ULW0 747 aaKnown RBP19.02■□□□□ 0.64
ACTN4-202ENST00000390009 THSD7BQ9C0I4 1608 aa19.01■□□□□ 0.63
ACTN4-202ENST00000390009 ARL5CA6NH57 179 aa19.01■□□□□ 0.63
ACTN4-202ENST00000390009 ACAT1P24752 427 aaKnown RBP19.01■□□□□ 0.63
ACTN4-202ENST00000390009 SCNN1AP37088 669 aa19.01■□□□□ 0.63
ACTN4-202ENST00000390009 MDH1P40925 334 aaKnown RBP19.01■□□□□ 0.63
ACTN4-202ENST00000390009 KYNUQ16719 465 aa19.01■□□□□ 0.63
ACTN4-202ENST00000390009 CCDC142Q17RM4 750 aa19.01■□□□□ 0.63
ACTN4-202ENST00000390009 AGMOQ6ZNB7 445 aa19.01■□□□□ 0.63
ACTN4-202ENST00000390009 RELL1Q8IUW5 271 aa19.01■□□□□ 0.63
ACTN4-202ENST00000390009 HNRNPABQ99729 332 aaKnown RBP19.01■□□□□ 0.63
ACTN4-202ENST00000390009 FOXP3Q9BZS1 431 aa19.01■□□□□ 0.63
ACTN4-202ENST00000390009 C10orf88Q9H8K7 445 aa19.01■□□□□ 0.63
ACTN4-202ENST00000390009 NINJ2Q9NZG7 142 aa19.01■□□□□ 0.63
ACTN4-202ENST00000390009 GIT1Q9Y2X7 761 aa19.01■□□□□ 0.63
ACTN4-202ENST00000390009 GABRDO14764 452 aa19.01■□□□□ 0.63
ACTN4-202ENST00000390009 RASGRF2O14827 1237 aa19.01■□□□□ 0.63
ACTN4-202ENST00000390009 XPO1O14980 1071 aaKnown RBP19.01■□□□□ 0.63
ACTN4-202ENST00000390009 RGS16O15492 202 aaPredicted RBP19.01■□□□□ 0.63
ACTN4-202ENST00000390009 FAM163BP0C2L3 166 aa19.01■□□□□ 0.63
ACTN4-202ENST00000390009 CST5P28325 142 aaPredicted RBP19.01■□□□□ 0.63
ACTN4-202ENST00000390009 PTPN9P43378 593 aa19.01■□□□□ 0.63
ACTN4-202ENST00000390009 CLCNKBP51801 687 aa19.01■□□□□ 0.63
ACTN4-202ENST00000390009 GDF10P55107 478 aa19.01■□□□□ 0.63
ACTN4-202ENST00000390009 HNRNPH2P55795 449 aaKnown RBP19.01■□□□□ 0.63
ACTN4-202ENST00000390009 HDAC4P56524 1084 aa19.01■□□□□ 0.63
ACTN4-202ENST00000390009 SP3Q02447 781 aa19.01■□□□□ 0.63
ACTN4-202ENST00000390009 NOGQ13253 232 aa19.01■□□□□ 0.63
ACTN4-202ENST00000390009 KRT81Q14533 505 aa19.01■□□□□ 0.63
ACTN4-202ENST00000390009 MAP7D3Q8IWC1 876 aa19.01■□□□□ 0.63
ACTN4-202ENST00000390009 FUKQ8N0W3 1084 aa19.01■□□□□ 0.63
ACTN4-202ENST00000390009 TEKT4Q8WW24 435 aa19.01■□□□□ 0.63
ACTN4-202ENST00000390009 SENP8Q96LD8 212 aa19.01■□□□□ 0.63
ACTN4-202ENST00000390009 TBCBQ99426 244 aa19.01■□□□□ 0.63
ACTN4-202ENST00000390009 NCAPGQ9BPX3 1015 aa19.01■□□□□ 0.63
ACTN4-202ENST00000390009 SLC12A6Q9UHW9 1150 aa19.01■□□□□ 0.63
ACTN4-202ENST00000390009 PADI3Q9ULW8 664 aa19.01■□□□□ 0.63
ACTN4-202ENST00000390009 TDRD15B5MCY1 1934 aaKnown RBP19.01■□□□□ 0.63
ACTN4-202ENST00000390009 AOC2O75106 756 aa19■□□□□ 0.63
ACTN4-202ENST00000390009 PTPN1P18031 435 aaKnown RBP19■□□□□ 0.63
ACTN4-202ENST00000390009 TFE3P19532 575 aaPredicted RBP19■□□□□ 0.63
ACTN4-202ENST00000390009 CD52P31358 61 aa19■□□□□ 0.63
ACTN4-202ENST00000390009 SLCO1A2P46721 670 aa19■□□□□ 0.63
ACTN4-202ENST00000390009 SCNN1GP51170 649 aa19■□□□□ 0.63
ACTN4-202ENST00000390009 EIF3EP60228 445 aaKnown RBP19■□□□□ 0.63
ACTN4-202ENST00000390009 MORF4L2Q15014 288 aa19■□□□□ 0.63
ACTN4-202ENST00000390009 PDK2Q15119 407 aa19■□□□□ 0.63
ACTN4-202ENST00000390009 ZC3H12AQ5D1E8 599 aaKnown RBP19■□□□□ 0.63
ACTN4-202ENST00000390009 ARCQ7LC44 396 aa19■□□□□ 0.63
ACTN4-202ENST00000390009 RSAD2Q8WXG1 361 aa19■□□□□ 0.63
ACTN4-202ENST00000390009 RBM15Q96T37 977 aaKnown RBP eCLIP19■□□□□ 0.638e-7■□□□□ 10.9
ACTN4-202ENST00000390009 SNRNP25Q9BV90 132 aaKnown RBP19■□□□□ 0.63
ACTN4-202ENST00000390009 DUSP16Q9BY84 665 aa19■□□□□ 0.63
ACTN4-202ENST00000390009 ROPN1BQ9BZX4 212 aaPredicted RBP19■□□□□ 0.63
ACTN4-202ENST00000390009 ROPN1Q9HAT0 212 aaPredicted RBP19■□□□□ 0.63
ACTN4-202ENST00000390009 GPBP1L1Q9HC44 474 aaPredicted RBP19■□□□□ 0.63
ACTN4-202ENST00000390009 GPATCH2LQ9NWQ4 482 aa19■□□□□ 0.63
ACTN4-202ENST00000390009 MCF2LO15068 1137 aa19■□□□□ 0.63
ACTN4-202ENST00000390009 IVLP07476 585 aa19■□□□□ 0.63
ACTN4-202ENST00000390009 GHRP10912 638 aa19■□□□□ 0.63
ACTN4-202ENST00000390009 TFDP2Q14188 446 aa19■□□□□ 0.63
ACTN4-202ENST00000390009 RNASEH2BQ5TBB1 312 aaKnown RBP19■□□□□ 0.63
ACTN4-202ENST00000390009 CEP128Q6ZU80 1094 aa19■□□□□ 0.63
ACTN4-202ENST00000390009 MRPL10Q7Z7H8 261 aaKnown RBP19■□□□□ 0.63
ACTN4-202ENST00000390009 PIGZQ86VD9 579 aa19■□□□□ 0.63
ACTN4-202ENST00000390009 SPATA18Q8TC71 538 aa19■□□□□ 0.63
ACTN4-202ENST00000390009 RNF157Q96PX1 679 aa19■□□□□ 0.63
ACTN4-202ENST00000390009 C11orf84Q9BUA3 381 aaPredicted RBP19■□□□□ 0.63
ACTN4-202ENST00000390009 HTTP42858 3142 aa18.99■□□□□ 0.63
ACTN4-202ENST00000390009 CLDN5O00501 218 aa18.99■□□□□ 0.63
ACTN4-202ENST00000390009 MDM4O15151 490 aa18.99■□□□□ 0.63
ACTN4-202ENST00000390009 RBP3P10745 1247 aa18.99■□□□□ 0.63
ACTN4-202ENST00000390009 LSP1P33241 339 aa18.99■□□□□ 0.63
ACTN4-202ENST00000390009 SLC8A3P57103 927 aa18.99■□□□□ 0.63
ACTN4-202ENST00000390009 NPNTQ6UXI9 565 aa18.99■□□□□ 0.63
ACTN4-202ENST00000390009 PCSK9Q8NBP7 692 aaKnown RBP18.99■□□□□ 0.63
ACTN4-202ENST00000390009 TRAF3IP1Q8TDR0 691 aaPredicted RBP18.99■□□□□ 0.63
ACTN4-202ENST00000390009 DDX43Q9NXZ2 648 aaKnown RBP18.99■□□□□ 0.63
ACTN4-202ENST00000390009 CALCOCO1Q9P1Z2 691 aa18.99■□□□□ 0.63
ACTN4-202ENST00000390009 NDC80O14777 642 aa18.98■□□□□ 0.63
ACTN4-202ENST00000390009 MGEA5O60502 916 aa18.98■□□□□ 0.63
ACTN4-202ENST00000390009 CAPN15O75808 1086 aa18.98■□□□□ 0.63
ACTN4-202ENST00000390009 AGTP01019 485 aa18.98■□□□□ 0.63
ACTN4-202ENST00000390009 NPR3P17342 541 aa18.98■□□□□ 0.63
ACTN4-202ENST00000390009 IL4RP24394 825 aa18.98■□□□□ 0.63
ACTN4-202ENST00000390009 AUHQ13825 339 aaKnown RBP18.98■□□□□ 0.63
ACTN4-202ENST00000390009 NOMO1Q15155 1222 aa18.98■□□□□ 0.63
ACTN4-202ENST00000390009 LONRF1Q17RB8 773 aa18.98■□□□□ 0.63
ACTN4-202ENST00000390009 KIAA0319Q5VV43 1072 aa18.98■□□□□ 0.63
ACTN4-202ENST00000390009 PAQR9Q6ZVX9 377 aa18.98■□□□□ 0.63
ACTN4-202ENST00000390009 UNC45BQ8IWX7 931 aa18.98■□□□□ 0.63
ACTN4-202ENST00000390009 C3orf58Q8NDZ4 430 aa18.98■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms