RNA–Protein interactions for RNA: ENST00000389373.3

IFT88-203, Transcript of intraflagellar transport 88, humanhuman

TSL 4

Gene IFT88, Length 575 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT88-203ENST00000389373 FOXJ1Q92949 421 aa10.3□□□□□ -0.76
IFT88-203ENST00000389373 MYLPFQ96A32 169 aa10.3□□□□□ -0.76
IFT88-203ENST00000389373 FUBP3Q96I24 572 aaKnown RBP eCLIP10.3□□□□□ -0.76
IFT88-203ENST00000389373 FAM84AQ96KN4 292 aa10.3□□□□□ -0.76
IFT88-203ENST00000389373 ACOX2Q99424 681 aa10.3□□□□□ -0.76
IFT88-203ENST00000389373 PKMYT1Q99640 499 aa10.3□□□□□ -0.76
IFT88-203ENST00000389373 KIF2CQ99661 725 aa10.3□□□□□ -0.76
IFT88-203ENST00000389373 ZDHHC5Q9C0B5 715 aa10.3□□□□□ -0.76
IFT88-203ENST00000389373 IKZF4Q9H2S9 585 aa10.3□□□□□ -0.76
IFT88-203ENST00000389373 PARVGQ9HBI0 331 aa10.3□□□□□ -0.76
IFT88-203ENST00000389373 KCND2Q9NZV8 630 aa10.3□□□□□ -0.76
IFT88-203ENST00000389373 TBC1D14Q9P2M4 693 aa10.3□□□□□ -0.76
IFT88-203ENST00000389373 DKK4Q9UBT3 224 aa10.3□□□□□ -0.76
IFT88-203ENST00000389373 ODF2LQ9ULJ1 636 aa10.3□□□□□ -0.76
IFT88-203ENST00000389373 SH3BP1Q9Y3L3 701 aa10.3□□□□□ -0.76
IFT88-203ENST00000389373 R3HCC1Q9Y3T6 440 aaKnown RBP10.3□□□□□ -0.76
IFT88-203ENST00000389373 PCDH15Q96QU1 1955 aa10.3□□□□□ -0.76
IFT88-203ENST00000389373 TCHHQ07283 1943 aa10.29□□□□□ -0.76
IFT88-203ENST00000389373 A0A1B0GTW7 788 aa10.29□□□□□ -0.76
IFT88-203ENST00000389373 CILPO75339 1184 aa10.29□□□□□ -0.76
IFT88-203ENST00000389373 IL18RAPO95256 599 aa10.29□□□□□ -0.76
IFT88-203ENST00000389373 IRF1P10914 325 aa10.29□□□□□ -0.76
IFT88-203ENST00000389373 LMO2P25791 158 aa10.29□□□□□ -0.76
IFT88-203ENST00000389373 MAGEA11P43364 429 aa10.29□□□□□ -0.76
IFT88-203ENST00000389373 NEK4P51957 841 aa10.29□□□□□ -0.76
IFT88-203ENST00000389373 ST3GAL1Q11201 340 aa10.29□□□□□ -0.76
IFT88-203ENST00000389373 TAF10Q12962 218 aa10.29□□□□□ -0.76
IFT88-203ENST00000389373 TDRD10Q5VZ19 366 aaKnown RBP10.29□□□□□ -0.76
IFT88-203ENST00000389373 LARP1BQ659C4 914 aaKnown RBP10.29□□□□□ -0.76
IFT88-203ENST00000389373 GRAMD4Q6IC98 578 aa10.29□□□□□ -0.76
IFT88-203ENST00000389373 CRELD2Q6UXH1 353 aaPredicted RBP10.29□□□□□ -0.76
IFT88-203ENST00000389373 LRRC69Q6ZNQ3 347 aa10.29□□□□□ -0.76
IFT88-203ENST00000389373 HS2ST1Q7LGA3 356 aa10.29□□□□□ -0.76
IFT88-203ENST00000389373 DDX42Q86XP3 938 aaKnown RBP eCLIP10.29□□□□□ -0.76
IFT88-203ENST00000389373 PHTF2Q8N3S3 785 aa10.29□□□□□ -0.76
IFT88-203ENST00000389373 C1orf127Q8N9H9 656 aa10.29□□□□□ -0.76
IFT88-203ENST00000389373 TERB1Q8NA31 727 aa10.29□□□□□ -0.76
IFT88-203ENST00000389373 FBXO18Q8NFZ0 1043 aa10.29□□□□□ -0.76
IFT88-203ENST00000389373 SCFD1Q8WVM8 642 aa10.29□□□□□ -0.76
IFT88-203ENST00000389373 SPATA17Q96L03 361 aa10.29□□□□□ -0.76
IFT88-203ENST00000389373 CDC6Q99741 560 aa10.29□□□□□ -0.76
IFT88-203ENST00000389373 SYT15Q9BQS2 421 aa10.29□□□□□ -0.76
IFT88-203ENST00000389373 FAM213AQ9BRX8 229 aa10.29□□□□□ -0.76
IFT88-203ENST00000389373 GPR174Q9BXC1 333 aa10.29□□□□□ -0.76
IFT88-203ENST00000389373 DNAJC17Q9NVM6 304 aaKnown RBP10.29□□□□□ -0.76
IFT88-203ENST00000389373 TOR4AQ9NXH8 423 aa10.29□□□□□ -0.76
IFT88-203ENST00000389373 HCN2Q9UL51 889 aa10.29□□□□□ -0.76
IFT88-203ENST00000389373 WDR3Q9UNX4 943 aaKnown RBP eCLIP10.29□□□□□ -0.76
IFT88-203ENST00000389373 RAI2Q9Y5P3 530 aa10.29□□□□□ -0.76
IFT88-203ENST00000389373 E2F8A0AVK6 867 aa10.28□□□□□ -0.76
IFT88-203ENST00000389373 VWA3AA6NCI4 1184 aa10.28□□□□□ -0.76
IFT88-203ENST00000389373 F8VP50 259 aa10.28□□□□□ -0.76
IFT88-203ENST00000389373 TK2O00142 265 aa10.28□□□□□ -0.76
IFT88-203ENST00000389373 LAD1O00515 517 aa10.28□□□□□ -0.76
IFT88-203ENST00000389373 ATXN7O15265 892 aaPredicted RBP10.28□□□□□ -0.76
IFT88-203ENST00000389373 CER1O95813 267 aa10.28□□□□□ -0.76
IFT88-203ENST00000389373 NCAM1P13591 858 aa10.28□□□□□ -0.76
IFT88-203ENST00000389373 CD6P30203 668 aa10.28□□□□□ -0.76
IFT88-203ENST00000389373 PRPHP41219 470 aa10.28□□□□□ -0.76
IFT88-203ENST00000389373 PPP3CCP48454 512 aa10.28□□□□□ -0.76
IFT88-203ENST00000389373 WNT7BP56706 349 aa10.28□□□□□ -0.76
IFT88-203ENST00000389373 GTF2BQ00403 316 aa10.28□□□□□ -0.76
IFT88-203ENST00000389373 SOWAHAQ2M3V2 549 aa10.28□□□□□ -0.76
IFT88-203ENST00000389373 HLA-BQ31612 363 aa10.28□□□□□ -0.76
IFT88-203ENST00000389373 HYIQ5T013 277 aa10.28□□□□□ -0.76
IFT88-203ENST00000389373 FAM171BQ6P995 826 aa10.28□□□□□ -0.76
IFT88-203ENST00000389373 VSTM1Q6UX27 236 aa10.28□□□□□ -0.76
IFT88-203ENST00000389373 TMEM25Q86YD3 366 aa10.28□□□□□ -0.76
IFT88-203ENST00000389373 NT5DC4Q86YG4 428 aa10.28□□□□□ -0.76
IFT88-203ENST00000389373 BBS7Q8IWZ6 715 aa10.28□□□□□ -0.76
IFT88-203ENST00000389373 ETFBKMTQ8IXQ9 262 aa10.28□□□□□ -0.76
IFT88-203ENST00000389373 PDCD7Q8N8D1 485 aaKnown RBP10.28□□□□□ -0.76
IFT88-203ENST00000389373 KCNV2Q8TDN2 545 aa10.28□□□□□ -0.76
IFT88-203ENST00000389373 SAAL1Q96ER3 474 aa10.28□□□□□ -0.76
IFT88-203ENST00000389373 TOE1Q96GM8 510 aaKnown RBP10.28□□□□□ -0.76
IFT88-203ENST00000389373 SLITRK1Q96PX8 696 aa10.28□□□□□ -0.76
IFT88-203ENST00000389373 CRTAC1Q9NQ79 661 aa10.28□□□□□ -0.76
IFT88-203ENST00000389373 SPHK2Q9NRA0 654 aa10.28□□□□□ -0.76
IFT88-203ENST00000389373 EHD2Q9NZN4 543 aa10.28□□□□□ -0.76
IFT88-203ENST00000389373 CHORDC1Q9UHD1 332 aaPredicted RBP10.28□□□□□ -0.76
IFT88-203ENST00000389373 CDH9Q9ULB4 789 aa10.28□□□□□ -0.76
IFT88-203ENST00000389373 BTBD3Q9Y2F9 522 aa10.28□□□□□ -0.76
IFT88-203ENST00000389373 FNDC3AQ9Y2H6 1198 aaKnown RBP10.28□□□□□ -0.76
IFT88-203ENST00000389373 CEP192Q8TEP8 1941 aa10.28□□□□□ -0.76
IFT88-203ENST00000389373 MYH11P35749 1972 aa10.28□□□□□ -0.76
IFT88-203ENST00000389373 GCN1Q92616 2671 aaKnown RBP10.28□□□□□ -0.76
IFT88-203ENST00000389373 LOC400499M0QZD8 3231 aa10.27□□□□□ -0.77
IFT88-203ENST00000389373 A0A1B0GVT2 93 aa10.27□□□□□ -0.77
IFT88-203ENST00000389373 GOLGA8IPA6NC78 632 aa10.27□□□□□ -0.77
IFT88-203ENST00000389373 GOLGA8JA6NMD2 632 aa10.27□□□□□ -0.77
IFT88-203ENST00000389373 WASH3PC4AMC7 463 aa10.27□□□□□ -0.77
IFT88-203ENST00000389373 PLK4O00444 970 aa10.27□□□□□ -0.77
IFT88-203ENST00000389373 GABRDO14764 452 aa10.27□□□□□ -0.77
IFT88-203ENST00000389373 CAPN9O14815 690 aa10.27□□□□□ -0.77
IFT88-203ENST00000389373 TRIM66O15016 1216 aa10.27□□□□□ -0.77
IFT88-203ENST00000389373 FLRT2O43155 660 aa10.27□□□□□ -0.77
IFT88-203ENST00000389373 TBCAO75347 108 aaKnown RBP10.27□□□□□ -0.77
IFT88-203ENST00000389373 OAS1P00973 400 aaKnown RBP10.27□□□□□ -0.77
IFT88-203ENST00000389373 TMEM191BP0C7N4 346 aa10.27□□□□□ -0.77
IFT88-203ENST00000389373 HLA-EP13747 358 aa10.27□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms