RNA–Protein interactions for RNA: ENST00000389212.7

RAPGEF3-201, Transcript of Rap guanine nucleotide exchange factor 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene RAPGEF3, Length 3,294 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3-201ENST00000389212 C15orf59Q2T9L4 293 aaPredicted RBP12.22□□□□□ -0.45
RAPGEF3-201ENST00000389212 CENPUQ71F23 418 aa12.22□□□□□ -0.45
RAPGEF3-201ENST00000389212 KCTD6Q8NC69 237 aa12.22□□□□□ -0.45
RAPGEF3-201ENST00000389212 RPF1Q9H9Y2 349 aaKnown RBP12.22□□□□□ -0.45
RAPGEF3-201ENST00000389212 GPATCH2LQ9NWQ4 482 aa12.22□□□□□ -0.45
RAPGEF3-201ENST00000389212 KRT16P08779 473 aa12.22□□□□□ -0.45
RAPGEF3-201ENST00000389212 ETS2P15036 469 aa12.22□□□□□ -0.45
RAPGEF3-201ENST00000389212 KDELR1P24390 212 aa12.22□□□□□ -0.45
RAPGEF3-201ENST00000389212 MIPP30301 263 aa12.22□□□□□ -0.45
RAPGEF3-201ENST00000389212 RGS7P49802 495 aa12.22□□□□□ -0.45
RAPGEF3-201ENST00000389212 USP46P62068 366 aa12.22□□□□□ -0.45
RAPGEF3-201ENST00000389212 CBX3Q13185 183 aa12.22□□□□□ -0.45
RAPGEF3-201ENST00000389212 C14orf80Q86SX3 495 aa12.22□□□□□ -0.45
RAPGEF3-201ENST00000389212 SLC35B2Q8TB61 432 aa12.22□□□□□ -0.45
RAPGEF3-201ENST00000389212 SMC6Q96SB8 1091 aa12.22□□□□□ -0.45
RAPGEF3-201ENST00000389212 SYT15Q9BQS2 421 aa12.22□□□□□ -0.45
RAPGEF3-201ENST00000389212 MICAL2O94851 1124 aa12.21□□□□□ -0.45
RAPGEF3-201ENST00000389212 ASMTLO95671 621 aa12.21□□□□□ -0.45
RAPGEF3-201ENST00000389212 VTNP04004 478 aa12.21□□□□□ -0.45
RAPGEF3-201ENST00000389212 KRT4P19013 534 aa12.21□□□□□ -0.45
RAPGEF3-201ENST00000389212 CD151P48509 253 aa12.21□□□□□ -0.45
RAPGEF3-201ENST00000389212 KLC1Q07866 573 aa12.21□□□□□ -0.45
RAPGEF3-201ENST00000389212 MORF4L2Q15014 288 aa12.21□□□□□ -0.45
RAPGEF3-201ENST00000389212 FAM102AQ5T9C2 384 aaPredicted RBP12.21□□□□□ -0.45
RAPGEF3-201ENST00000389212 FAXCQ5TGI0 409 aa12.21□□□□□ -0.45
RAPGEF3-201ENST00000389212 XYLT1Q86Y38 959 aa12.21□□□□□ -0.45
RAPGEF3-201ENST00000389212 SLC4A11Q8NBS3 891 aa12.21□□□□□ -0.45
RAPGEF3-201ENST00000389212 FBXO36Q8NEA4 188 aa12.21□□□□□ -0.45
RAPGEF3-201ENST00000389212 PYROXD1Q8WU10 500 aa12.21□□□□□ -0.45
RAPGEF3-201ENST00000389212 HEXIM2Q96MH2 286 aaKnown RBP12.21□□□□□ -0.45
RAPGEF3-201ENST00000389212 PEBP4Q96S96 227 aa12.21□□□□□ -0.45
RAPGEF3-201ENST00000389212 PCDH9Q9HC56 1237 aa12.21□□□□□ -0.45
RAPGEF3-201ENST00000389212 KLHL14Q9P2G3 628 aa12.21□□□□□ -0.45
RAPGEF3-201ENST00000389212 WDR35Q9P2L0 1181 aa12.21□□□□□ -0.45
RAPGEF3-201ENST00000389212 SCOCQ9UIL1 159 aa12.21□□□□□ -0.45
RAPGEF3-201ENST00000389212 CCDC160A6NGH7 325 aa12.21□□□□□ -0.45
RAPGEF3-201ENST00000389212 ACKR2O00590 384 aa12.21□□□□□ -0.45
RAPGEF3-201ENST00000389212 AVILO75366 819 aa12.21□□□□□ -0.45
RAPGEF3-201ENST00000389212 DDNO94850 711 aaPredicted RBP12.21□□□□□ -0.45
RAPGEF3-201ENST00000389212 NQO1P15559 274 aaKnown RBP12.21□□□□□ -0.45
RAPGEF3-201ENST00000389212 ALOX15P16050 662 aaPredicted RBP12.21□□□□□ -0.45
RAPGEF3-201ENST00000389212 COPS2P61201 443 aa12.21□□□□□ -0.45
RAPGEF3-201ENST00000389212 YWHAEP62258 255 aaKnown RBP12.21□□□□□ -0.45
RAPGEF3-201ENST00000389212 MXD4Q14582 209 aaPredicted RBP12.21□□□□□ -0.45
RAPGEF3-201ENST00000389212 MTFR1Q15390 333 aa12.21□□□□□ -0.45
RAPGEF3-201ENST00000389212 SH3D19Q5HYK7 790 aa12.21□□□□□ -0.45
RAPGEF3-201ENST00000389212 CELF3Q5SZQ8 465 aaKnown RBP12.21□□□□□ -0.45
RAPGEF3-201ENST00000389212 LRRC38Q5VT99 294 aa12.21□□□□□ -0.45
RAPGEF3-201ENST00000389212 C1orf228Q6PIY5 440 aa12.21□□□□□ -0.45
RAPGEF3-201ENST00000389212 PPP1R21Q6ZMI0 780 aa12.21□□□□□ -0.45
RAPGEF3-201ENST00000389212 C3orf62Q6ZUJ4 267 aa12.21□□□□□ -0.45
RAPGEF3-201ENST00000389212 C12orf29Q8N999 325 aa12.21□□□□□ -0.45
RAPGEF3-201ENST00000389212 NKD2Q969F2 451 aaPredicted RBP12.21□□□□□ -0.45
RAPGEF3-201ENST00000389212 TMEM237Q96Q45 408 aa12.21□□□□□ -0.45
RAPGEF3-201ENST00000389212 CXCL16Q9H2A7 254 aa12.21□□□□□ -0.45
RAPGEF3-201ENST00000389212 PHTF1Q9UMS5 762 aa12.21□□□□□ -0.45
RAPGEF3-201ENST00000389212 GINS2Q9Y248 185 aa12.21□□□□□ -0.45
RAPGEF3-201ENST00000389212 CSADQ9Y600 493 aa12.21□□□□□ -0.45
RAPGEF3-201ENST00000389212 A0A087WZ62 844 aa12.21□□□□□ -0.46
RAPGEF3-201ENST00000389212 SIGLEC16A6NMB1 481 aa12.21□□□□□ -0.46
RAPGEF3-201ENST00000389212 ALOX15BO15296 676 aa12.21□□□□□ -0.46
RAPGEF3-201ENST00000389212 NDUFB5O43674 189 aa12.21□□□□□ -0.46
RAPGEF3-201ENST00000389212 ITGAVP06756 1048 aa12.21□□□□□ -0.46
RAPGEF3-201ENST00000389212 STAG3L1P0CL83 205 aa12.21□□□□□ -0.46
RAPGEF3-201ENST00000389212 TXNP10599 105 aaKnown RBP12.21□□□□□ -0.46
RAPGEF3-201ENST00000389212 POLR2BP30876 1174 aaKnown RBP12.21□□□□□ -0.46
RAPGEF3-201ENST00000389212 EIF3EP60228 445 aaKnown RBP12.21□□□□□ -0.46
RAPGEF3-201ENST00000389212 LVRNQ6Q4G3 990 aa12.21□□□□□ -0.46
RAPGEF3-201ENST00000389212 RELL1Q8IUW5 271 aa12.21□□□□□ -0.46
RAPGEF3-201ENST00000389212 IGDCC3Q8IVU1 814 aa12.21□□□□□ -0.46
RAPGEF3-201ENST00000389212 DTNBP1Q96EV8 351 aa12.21□□□□□ -0.46
RAPGEF3-201ENST00000389212 FDXACB1Q9BRP7 624 aaPredicted RBP12.21□□□□□ -0.46
RAPGEF3-201ENST00000389212 PTPRHQ9HD43 1115 aa12.21□□□□□ -0.46
RAPGEF3-201ENST00000389212 DDX56Q9NY93 547 aaKnown RBP12.21□□□□□ -0.46
RAPGEF3-201ENST00000389212 PRKAG3Q9UGI9 489 aa12.21□□□□□ -0.46
RAPGEF3-201ENST00000389212 PCDHGC3Q9UN70 934 aa12.21□□□□□ -0.46
RAPGEF3-201ENST00000389212 E2F6O75461 281 aa12.2□□□□□ -0.46
RAPGEF3-201ENST00000389212 CNMDO75829 334 aa12.2□□□□□ -0.46
RAPGEF3-201ENST00000389212 GSTA1P08263 222 aa12.2□□□□□ -0.46
RAPGEF3-201ENST00000389212 ABHD2P08910 425 aa12.2□□□□□ -0.46
RAPGEF3-201ENST00000389212 RBP3P10745 1247 aa12.2□□□□□ -0.46
RAPGEF3-201ENST00000389212 CLCN2P51788 898 aa12.2□□□□□ -0.46
RAPGEF3-201ENST00000389212 AP3M2P53677 418 aa12.2□□□□□ -0.46
RAPGEF3-201ENST00000389212 MBTD1Q05BQ5 628 aa12.2□□□□□ -0.46
RAPGEF3-201ENST00000389212 PTPN11Q06124 597 aaPredicted RBP12.2□□□□□ -0.46
RAPGEF3-201ENST00000389212 OVGP1Q12889 678 aa12.2□□□□□ -0.46
RAPGEF3-201ENST00000389212 TTLL12Q14166 644 aaPredicted RBP12.2□□□□□ -0.46
RAPGEF3-201ENST00000389212 SETDB1Q15047 1291 aa12.2□□□□□ -0.46
RAPGEF3-201ENST00000389212 GALNTL6Q49A17 601 aa12.2□□□□□ -0.46
RAPGEF3-201ENST00000389212 MAP1SQ66K74 1059 aaPredicted RBP12.2□□□□□ -0.46
RAPGEF3-201ENST00000389212 TRNP1Q6NT89 227 aa12.2□□□□□ -0.46
RAPGEF3-201ENST00000389212 ERP27Q96DN0 273 aa12.2□□□□□ -0.46
RAPGEF3-201ENST00000389212 MYLK2Q9H1R3 596 aa12.2□□□□□ -0.46
RAPGEF3-201ENST00000389212 VCX3BQ9H321 246 aa12.2□□□□□ -0.46
RAPGEF3-201ENST00000389212 VCX3AQ9NNX9 186 aa12.2□□□□□ -0.46
RAPGEF3-201ENST00000389212 DRG1Q9Y295 367 aaKnown RBP12.2□□□□□ -0.46
RAPGEF3-201ENST00000389212 SIP14410 1827 aa12.2□□□□□ -0.46
RAPGEF3-201ENST00000389212 CCND1P24385 295 aa12.2□□□□□ -0.46
RAPGEF3-201ENST00000389212 ADRA1DP25100 572 aa12.2□□□□□ -0.46
RAPGEF3-201ENST00000389212 TARSP26639 723 aaKnown RBP12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms