RNA–Protein interactions for RNA: ENST00000384254.1

RNU6-40P-201, Transcript of RNA, U6 small nuclear 40, pseudogene, humanhuman

BASIC

Gene RNU6-40P, Length 107 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-40P-201ENST00000384254 SSH3Q8TE77 659 aa6.25□□□□□ -1.41
RNU6-40P-201ENST00000384254 RSC1A1Q92681 617 aa6.25□□□□□ -1.41
RNU6-40P-201ENST00000384254 EIF3CQ99613 913 aaKnown RBP6.25□□□□□ -1.41
RNU6-40P-201ENST00000384254 VN1R3Q9BXE9 311 aa6.25□□□□□ -1.41
RNU6-40P-201ENST00000384254 ZNF703Q9H7S9 590 aaPredicted RBP6.25□□□□□ -1.41
RNU6-40P-201ENST00000384254 STEAP1Q9UHE8 339 aa6.25□□□□□ -1.41
RNU6-40P-201ENST00000384254 LZTS1Q9Y250 596 aa6.25□□□□□ -1.41
RNU6-40P-201ENST00000384254 OR2W5A6NFC9 320 aa6.24□□□□□ -1.41
RNU6-40P-201ENST00000384254 HMGB1P1B2RPK0 211 aaPredicted RBP6.24□□□□□ -1.41
RNU6-40P-201ENST00000384254 SPDEFO95238 335 aa6.24□□□□□ -1.41
RNU6-40P-201ENST00000384254 ANXA6P08133 673 aa6.24□□□□□ -1.41
RNU6-40P-201ENST00000384254 SRGNP10124 158 aa6.24□□□□□ -1.41
RNU6-40P-201ENST00000384254 PTGS2P35354 604 aa6.24□□□□□ -1.41
RNU6-40P-201ENST00000384254 PAPOLAP51003 745 aaKnown RBP6.24□□□□□ -1.41
RNU6-40P-201ENST00000384254 TIAL1Q01085 375 aaKnown RBP eCLIP6.24□□□□□ -1.41
RNU6-40P-201ENST00000384254 SCAPQ12770 1279 aa6.24□□□□□ -1.41
RNU6-40P-201ENST00000384254 EIF2B5Q13144 721 aaKnown RBP6.24□□□□□ -1.41
RNU6-40P-201ENST00000384254 CLCA4Q14CN2 919 aa6.24□□□□□ -1.41
RNU6-40P-201ENST00000384254 IL17DQ8TAD2 202 aa6.24□□□□□ -1.41
RNU6-40P-201ENST00000384254 EXTL1Q92935 676 aa6.24□□□□□ -1.41
RNU6-40P-201ENST00000384254 FKBP10Q96AY3 582 aa6.24□□□□□ -1.41
RNU6-40P-201ENST00000384254 TBATAQ96M53 351 aa6.24□□□□□ -1.41
RNU6-40P-201ENST00000384254 PLEKHG4BQ96PX9 1271 aa6.24□□□□□ -1.41
RNU6-40P-201ENST00000384254 NUDT22Q9BRQ3 303 aa6.24□□□□□ -1.41
RNU6-40P-201ENST00000384254 DPCDQ9BVM2 203 aaPredicted RBP6.24□□□□□ -1.41
RNU6-40P-201ENST00000384254 BRD8Q9H0E9 1235 aa6.24□□□□□ -1.41
RNU6-40P-201ENST00000384254 C9orf78Q9NZ63 289 aaPredicted RBP6.24□□□□□ -1.41
RNU6-40P-201ENST00000384254 CEP72Q9P209 647 aa6.24□□□□□ -1.41
RNU6-40P-201ENST00000384254 NKX1-2Q9UD57 310 aaPredicted RBP6.24□□□□□ -1.41
RNU6-40P-201ENST00000384254 VPS51Q9UID3 782 aa6.24□□□□□ -1.41
RNU6-40P-201ENST00000384254 NFU1Q9UMS0 254 aa6.24□□□□□ -1.41
RNU6-40P-201ENST00000384254 DRG1Q9Y295 367 aaKnown RBP6.24□□□□□ -1.41
RNU6-40P-201ENST00000384254 LRRFIP2Q9Y608 721 aaKnown RBP6.24□□□□□ -1.41
RNU6-40P-201ENST00000384254 TMEM200CA6NKL6 621 aa6.23□□□□□ -1.41
RNU6-40P-201ENST00000384254 EIF3FO00303 357 aaPredicted RBP6.23□□□□□ -1.41
RNU6-40P-201ENST00000384254 NXPH3O95157 252 aa6.23□□□□□ -1.41
RNU6-40P-201ENST00000384254 PEX11BO96011 259 aa6.23□□□□□ -1.41
RNU6-40P-201ENST00000384254 ITGAMP11215 1152 aa6.23□□□□□ -1.41
RNU6-40P-201ENST00000384254 GYS1P13807 737 aa6.23□□□□□ -1.41
RNU6-40P-201ENST00000384254 CD53P19397 219 aa6.23□□□□□ -1.41
RNU6-40P-201ENST00000384254 ATXN1P54253 815 aaKnown RBP6.23□□□□□ -1.41
RNU6-40P-201ENST00000384254 CTSWP56202 376 aa6.23□□□□□ -1.41
RNU6-40P-201ENST00000384254 TP53BP2Q13625 1128 aa6.23□□□□□ -1.41
RNU6-40P-201ENST00000384254 R3HDM1Q15032 1099 aaKnown RBP6.23□□□□□ -1.41
RNU6-40P-201ENST00000384254 RALBP1Q15311 655 aa6.23□□□□□ -1.41
RNU6-40P-201ENST00000384254 RPS6KA2Q15349 733 aa6.23□□□□□ -1.41
RNU6-40P-201ENST00000384254 SF3B3Q15393 1217 aaKnown RBP6.23□□□□□ -1.41
RNU6-40P-201ENST00000384254 ST3GAL2Q16842 350 aa6.23□□□□□ -1.41
RNU6-40P-201ENST00000384254 SLC9A4Q6AI14 798 aa6.23□□□□□ -1.41
RNU6-40P-201ENST00000384254 CYP26C1Q6V0L0 522 aa6.23□□□□□ -1.41
RNU6-40P-201ENST00000384254 DTX2Q86UW9 622 aa6.23□□□□□ -1.41
RNU6-40P-201ENST00000384254 C2CD5Q86YS7 1000 aa6.23□□□□□ -1.41
RNU6-40P-201ENST00000384254 SLC44A2Q8IWA5 706 aaPredicted RBP6.23□□□□□ -1.41
RNU6-40P-201ENST00000384254 C11orf44Q8N8P7 122 aa6.23□□□□□ -1.41
RNU6-40P-201ENST00000384254 NGDNQ8NEJ9 315 aaKnown RBP6.23□□□□□ -1.41
RNU6-40P-201ENST00000384254 GLG1Q92896 1179 aa6.23□□□□□ -1.41
RNU6-40P-201ENST00000384254 PGBD1Q96JS3 809 aa6.23□□□□□ -1.41
RNU6-40P-201ENST00000384254 ADAM2Q99965 735 aa6.23□□□□□ -1.41
RNU6-40P-201ENST00000384254 ALG8Q9BVK2 526 aa6.23□□□□□ -1.41
RNU6-40P-201ENST00000384254 TAF1DQ9H5J8 278 aaPredicted RBP6.23□□□□□ -1.41
RNU6-40P-201ENST00000384254 TRIM36Q9NQ86 728 aa6.23□□□□□ -1.41
RNU6-40P-201ENST00000384254 SAGE1Q9NXZ1 904 aa6.23□□□□□ -1.41
RNU6-40P-201ENST00000384254 RAPGEFL1Q9UHV5 662 aa6.23□□□□□ -1.41
RNU6-40P-201ENST00000384254 CCNL1Q9UK58 526 aaPredicted RBP6.23□□□□□ -1.41
RNU6-40P-201ENST00000384254 FZD1Q9UP38 647 aa6.23□□□□□ -1.41
RNU6-40P-201ENST00000384254 SLC27A6Q9Y2P4 619 aa6.23□□□□□ -1.41
RNU6-40P-201ENST00000384254 FER1L4A9Z1Z3 1794 aa6.22□□□□□ -1.41
RNU6-40P-201ENST00000384254 A1L4Q6 167 aa6.22□□□□□ -1.41
RNU6-40P-201ENST00000384254 EFCAB8A8MWE9 144 aa6.22□□□□□ -1.41
RNU6-40P-201ENST00000384254 EXOC5O00471 708 aa6.22□□□□□ -1.41
RNU6-40P-201ENST00000384254 PDHA1P08559 390 aa6.22□□□□□ -1.41
RNU6-40P-201ENST00000384254 CST5P28325 142 aaPredicted RBP6.22□□□□□ -1.41
RNU6-40P-201ENST00000384254 LIPAP38571 399 aa6.22□□□□□ -1.41
RNU6-40P-201ENST00000384254 GSTM5P46439 218 aa6.22□□□□□ -1.41
RNU6-40P-201ENST00000384254 AARSP49588 968 aaKnown RBP eCLIP6.22□□□□□ -1.41
RNU6-40P-201ENST00000384254 TIRAPP58753 221 aa6.22□□□□□ -1.41
RNU6-40P-201ENST00000384254 JAG1P78504 1218 aa6.22□□□□□ -1.41
RNU6-40P-201ENST00000384254 TBCCQ15814 346 aa6.22□□□□□ -1.41
RNU6-40P-201ENST00000384254 SPDYAQ5MJ70 313 aa6.22□□□□□ -1.41
RNU6-40P-201ENST00000384254 FBXO47Q5MNV8 452 aa6.22□□□□□ -1.41
RNU6-40P-201ENST00000384254 ZNF618Q5T7W0 954 aa6.22□□□□□ -1.41
RNU6-40P-201ENST00000384254 NFRKBQ6P4R8 1299 aa6.22□□□□□ -1.41
RNU6-40P-201ENST00000384254 KCNV1Q6PIU1 500 aa6.22□□□□□ -1.41
RNU6-40P-201ENST00000384254 TTLL10Q6ZVT0 673 aa6.22□□□□□ -1.41
RNU6-40P-201ENST00000384254 CAND1Q86VP6 1230 aaKnown RBP6.22□□□□□ -1.41
RNU6-40P-201ENST00000384254 FTSJ3Q8IY81 847 aaKnown RBP6.22□□□□□ -1.41
RNU6-40P-201ENST00000384254 TEX19Q8NA77 164 aa6.22□□□□□ -1.41
RNU6-40P-201ENST00000384254 MYCBPAPQ8TBZ2 947 aa6.22□□□□□ -1.41
RNU6-40P-201ENST00000384254 XAGE5Q8WWM1 108 aa6.22□□□□□ -1.41
RNU6-40P-201ENST00000384254 THAP4Q8WY91 577 aa6.22□□□□□ -1.41
RNU6-40P-201ENST00000384254 LPIN2Q92539 896 aa6.22□□□□□ -1.41
RNU6-40P-201ENST00000384254 HAS1Q92839 578 aa6.22□□□□□ -1.41
RNU6-40P-201ENST00000384254 USP13Q92995 863 aaPredicted RBP6.22□□□□□ -1.41
RNU6-40P-201ENST00000384254 C3orf49Q96BT1 292 aa6.22□□□□□ -1.41
RNU6-40P-201ENST00000384254 FBXL20Q96IG2 436 aa6.22□□□□□ -1.41
RNU6-40P-201ENST00000384254 VPS50Q96JG6 964 aa6.22□□□□□ -1.41
RNU6-40P-201ENST00000384254 UBXN10Q96LJ8 280 aa6.22□□□□□ -1.41
RNU6-40P-201ENST00000384254 TRAPPC9Q96Q05 1148 aa6.22□□□□□ -1.41
RNU6-40P-201ENST00000384254 PYM1Q9BRP8 204 aaKnown RBP6.22□□□□□ -1.41
RNU6-40P-201ENST00000384254 PABPC3Q9H361 631 aaKnown RBP6.22□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms