RNA–Protein interactions for RNA: ENST00000381108.3

FAM239A-201, Transcript of family with sequence similarity 239 member A, humanhuman

TSL 2 BASIC

Gene FAM239A, Length 2,198 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM239A-201ENST00000381108 TOX2Q96NM4 488 aa11.47□□□□□ -0.57
FAM239A-201ENST00000381108 SLITRK1Q96PX8 696 aa11.47□□□□□ -0.57
FAM239A-201ENST00000381108 ACBD6Q9BR61 282 aa11.47□□□□□ -0.57
FAM239A-201ENST00000381108 CNPY3Q9BT09 278 aa11.47□□□□□ -0.57
FAM239A-201ENST00000381108 OSBPL8Q9BZF1 889 aa11.47□□□□□ -0.57
FAM239A-201ENST00000381108 TRIM31Q9BZY9 425 aa11.47□□□□□ -0.57
FAM239A-201ENST00000381108 FAM117AQ9C073 453 aa11.47□□□□□ -0.57
FAM239A-201ENST00000381108 SLITRK6Q9H5Y7 841 aa11.47□□□□□ -0.57
FAM239A-201ENST00000381108 ELAC1Q9H777 363 aaKnown RBP11.47□□□□□ -0.57
FAM239A-201ENST00000381108 NRDE2Q9H7Z3 1164 aa11.47□□□□□ -0.57
FAM239A-201ENST00000381108 LRRC4Q9HBW1 653 aa11.47□□□□□ -0.57
FAM239A-201ENST00000381108 ASNSD1Q9NWL6 643 aa11.47□□□□□ -0.57
FAM239A-201ENST00000381108 TBX21Q9UL17 535 aa11.47□□□□□ -0.57
FAM239A-201ENST00000381108 USP18Q9UMW8 372 aa11.47□□□□□ -0.57
FAM239A-201ENST00000381108 CXCL10P02778 98 aa11.46□□□□□ -0.57
FAM239A-201ENST00000381108 CLTBP09497 229 aa11.46□□□□□ -0.57
FAM239A-201ENST00000381108 TFE3P19532 575 aaPredicted RBP11.46□□□□□ -0.57
FAM239A-201ENST00000381108 BDNFP23560 247 aa11.46□□□□□ -0.57
FAM239A-201ENST00000381108 TNNT3P45378 269 aaPredicted RBP11.46□□□□□ -0.57
FAM239A-201ENST00000381108 ACADSBP45954 432 aa11.46□□□□□ -0.57
FAM239A-201ENST00000381108 CARSP49589 748 aaKnown RBP11.46□□□□□ -0.57
FAM239A-201ENST00000381108 ADCY2Q08462 1091 aa11.46□□□□□ -0.57
FAM239A-201ENST00000381108 HADHQ16836 314 aaKnown RBP11.46□□□□□ -0.57
FAM239A-201ENST00000381108 SCYL2Q6P3W7 929 aa11.46□□□□□ -0.57
FAM239A-201ENST00000381108 CCDC137Q6PK04 289 aaKnown RBP11.46□□□□□ -0.57
FAM239A-201ENST00000381108 GPRIN1Q7Z2K8 1008 aa11.46□□□□□ -0.57
FAM239A-201ENST00000381108 MAATS1Q7Z4T9 603 aa11.46□□□□□ -0.57
FAM239A-201ENST00000381108 LRRTM3Q86VH5 581 aa11.46□□□□□ -0.57
FAM239A-201ENST00000381108 ZDHHC17Q8IUH5 632 aa11.46□□□□□ -0.57
FAM239A-201ENST00000381108 NPAS4Q8IUM7 802 aa11.46□□□□□ -0.57
FAM239A-201ENST00000381108 THEM5Q8N1Q8 247 aa11.46□□□□□ -0.57
FAM239A-201ENST00000381108 FAM172AQ8WUF8 416 aa11.46□□□□□ -0.57
FAM239A-201ENST00000381108 ARMC5Q96C12 935 aa11.46□□□□□ -0.57
FAM239A-201ENST00000381108 SMARCD1Q96GM5 515 aa11.46□□□□□ -0.57
FAM239A-201ENST00000381108 RBM41Q96IZ5 413 aaKnown RBP11.46□□□□□ -0.57
FAM239A-201ENST00000381108 B3GALT6Q96L58 329 aa11.46□□□□□ -0.57
FAM239A-201ENST00000381108 PEBP4Q96S96 227 aa11.46□□□□□ -0.57
FAM239A-201ENST00000381108 SMOQ99835 787 aa11.46□□□□□ -0.57
FAM239A-201ENST00000381108 C11orf49Q9H6J7 331 aa11.46□□□□□ -0.57
FAM239A-201ENST00000381108 R3HDM2Q9Y2K5 976 aaKnown RBP11.46□□□□□ -0.57
FAM239A-201ENST00000381108 H3BQF6 201 aa11.45□□□□□ -0.58
FAM239A-201ENST00000381108 NRP1O14786 923 aa11.45□□□□□ -0.58
FAM239A-201ENST00000381108 FSCN2O14926 492 aa11.45□□□□□ -0.58
FAM239A-201ENST00000381108 TKTL1P51854 596 aa11.45□□□□□ -0.58
FAM239A-201ENST00000381108 EPHB4P54760 987 aa11.45□□□□□ -0.58
FAM239A-201ENST00000381108 TSPY1Q01534 308 aa11.45□□□□□ -0.58
FAM239A-201ENST00000381108 LRRC38Q5VT99 294 aa11.45□□□□□ -0.58
FAM239A-201ENST00000381108 SLC26A9Q7LBE3 791 aa11.45□□□□□ -0.58
FAM239A-201ENST00000381108 DDX42Q86XP3 938 aaKnown RBP eCLIP11.45□□□□□ -0.58
FAM239A-201ENST00000381108 IFT20Q8IY31 132 aa11.45□□□□□ -0.58
FAM239A-201ENST00000381108 CCDC105Q8IYK2 499 aa11.45□□□□□ -0.58
FAM239A-201ENST00000381108 EIF1ADQ8N9N8 165 aaKnown RBP11.45□□□□□ -0.58
FAM239A-201ENST00000381108 ZMIZ2Q8NF64 920 aa11.45□□□□□ -0.58
FAM239A-201ENST00000381108 CASKIN2Q8WXE0 1202 aa11.45□□□□□ -0.58
FAM239A-201ENST00000381108 HAUS1Q96CS2 278 aa11.45□□□□□ -0.58
FAM239A-201ENST00000381108 CHST7Q9NS84 486 aa11.45□□□□□ -0.58
FAM239A-201ENST00000381108 VPS18Q9P253 973 aa11.45□□□□□ -0.58
FAM239A-201ENST00000381108 ADAM28Q9UKQ2 775 aa11.45□□□□□ -0.58
FAM239A-201ENST00000381108 NFU1Q9UMS0 254 aa11.45□□□□□ -0.58
FAM239A-201ENST00000381108 PCDHB8Q9UN66 801 aa11.45□□□□□ -0.58
FAM239A-201ENST00000381108 FNDC1Q4ZHG4 1894 aaPredicted RBP11.45□□□□□ -0.58
FAM239A-201ENST00000381108 VWA8A3KMH1 1905 aa11.45□□□□□ -0.58
FAM239A-201ENST00000381108 A6NNZ2 444 aa11.45□□□□□ -0.58
FAM239A-201ENST00000381108 KRT7P08729 469 aa11.45□□□□□ -0.58
FAM239A-201ENST00000381108 CD48P09326 243 aa11.45□□□□□ -0.58
FAM239A-201ENST00000381108 CHRNA3P32297 505 aa11.45□□□□□ -0.58
FAM239A-201ENST00000381108 RPL34P49207 117 aaKnown RBP11.45□□□□□ -0.58
FAM239A-201ENST00000381108 SLC11A1P49279 550 aa11.45□□□□□ -0.58
FAM239A-201ENST00000381108 ATXN1P54253 815 aaKnown RBP11.45□□□□□ -0.58
FAM239A-201ENST00000381108 DYNLT1P63172 113 aa11.45□□□□□ -0.58
FAM239A-201ENST00000381108 ADCY1Q08828 1119 aa11.45□□□□□ -0.58
FAM239A-201ENST00000381108 PDAP1Q13442 181 aaKnown RBP11.45□□□□□ -0.58
FAM239A-201ENST00000381108 TUBB8Q3ZCM7 444 aa11.45□□□□□ -0.58
FAM239A-201ENST00000381108 LEKR1Q6ZMV7 388 aa11.45□□□□□ -0.58
FAM239A-201ENST00000381108 SPOCD1Q6ZMY3 1216 aa11.45□□□□□ -0.58
FAM239A-201ENST00000381108 POLNQ7Z5Q5 900 aa11.45□□□□□ -0.58
FAM239A-201ENST00000381108 TMCO2Q7Z6W1 182 aaPredicted RBP11.45□□□□□ -0.58
FAM239A-201ENST00000381108 RCOR2Q8IZ40 523 aa11.45□□□□□ -0.58
FAM239A-201ENST00000381108 ADAM33Q9BZ11 813 aa11.45□□□□□ -0.58
FAM239A-201ENST00000381108 DPH5Q9H2P9 285 aa11.45□□□□□ -0.58
FAM239A-201ENST00000381108 CYLDQ9NQC7 956 aa11.45□□□□□ -0.58
FAM239A-201ENST00000381108 STAU2Q9NUL3 570 aaKnown RBP eCLIP11.45□□□□□ -0.58
FAM239A-201ENST00000381108 DDX56Q9NY93 547 aaKnown RBP11.45□□□□□ -0.58
FAM239A-201ENST00000381108 NLRC5Q86WI3 1866 aa11.44□□□□□ -0.58
FAM239A-201ENST00000381108 SYNJ2BP-COX16A0A087WUM0 186 aa11.44□□□□□ -0.58
FAM239A-201ENST00000381108 ARHGEF37A1IGU5 675 aa11.44□□□□□ -0.58
FAM239A-201ENST00000381108 TRAPPC3O43617 180 aa11.44□□□□□ -0.58
FAM239A-201ENST00000381108 PRPSAP2O60256 369 aa11.44□□□□□ -0.58
FAM239A-201ENST00000381108 TRUB2O95900 331 aaKnown RBP11.44□□□□□ -0.58
FAM239A-201ENST00000381108 IVLP07476 585 aa11.44□□□□□ -0.58
FAM239A-201ENST00000381108 TYMPP19971 482 aa11.44□□□□□ -0.58
FAM239A-201ENST00000381108 ITGB8P26012 769 aa11.44□□□□□ -0.58
FAM239A-201ENST00000381108 CETN2P41208 172 aa11.44□□□□□ -0.58
FAM239A-201ENST00000381108 IFRD2Q12894 506 aaPredicted RBP11.44□□□□□ -0.58
FAM239A-201ENST00000381108 KLF1Q13351 362 aaPredicted RBP11.44□□□□□ -0.58
FAM239A-201ENST00000381108 HLTFQ14527 1009 aaKnown RBP eCLIP11.44□□□□□ -0.58
FAM239A-201ENST00000381108 SLC39A12Q504Y0 691 aa11.44□□□□□ -0.58
FAM239A-201ENST00000381108 TFDP3Q5H9I0 405 aa11.44□□□□□ -0.58
FAM239A-201ENST00000381108 FAM171A1Q5VUB5 890 aa11.44□□□□□ -0.58
FAM239A-201ENST00000381108 C1orf53Q5VUE5 145 aa11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms