RNA–Protein interactions for RNA: ENST00000380747.5

HMGN1-202, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3 BASIC

Gene HMGN1, Length 709 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-202ENST00000380747 CD19P15391 556 aa9.78□□□□□ -0.84
HMGN1-202ENST00000380747 PTMSP20962 102 aa9.78□□□□□ -0.84
HMGN1-202ENST00000380747 VIPR2P41587 438 aa9.78□□□□□ -0.84
HMGN1-202ENST00000380747 RAD23BP54727 409 aa9.78□□□□□ -0.84
HMGN1-202ENST00000380747 MAP3K7CLP57077 242 aa9.78□□□□□ -0.84
HMGN1-202ENST00000380747 TYRO3Q06418 890 aa9.78□□□□□ -0.84
HMGN1-202ENST00000380747 MAN2A1Q16706 1144 aa9.78□□□□□ -0.84
HMGN1-202ENST00000380747 DENND5BQ6ZUT9 1274 aa9.78□□□□□ -0.84
HMGN1-202ENST00000380747 RRAGAQ7L523 313 aa9.78□□□□□ -0.84
HMGN1-202ENST00000380747 TMEM150AQ86TG1 271 aa9.78□□□□□ -0.84
HMGN1-202ENST00000380747 FLCNQ8NFG4 579 aa9.78□□□□□ -0.84
HMGN1-202ENST00000380747 LMO3Q8TAP4 145 aa9.78□□□□□ -0.84
HMGN1-202ENST00000380747 ENOX1Q8TC92 643 aaKnown RBP9.78□□□□□ -0.84
HMGN1-202ENST00000380747 SMARCD2Q92925 531 aa9.78□□□□□ -0.84
HMGN1-202ENST00000380747 ELSPBP1Q96BH3 223 aa9.78□□□□□ -0.84
HMGN1-202ENST00000380747 THAP11Q96EK4 314 aa9.78□□□□□ -0.84
HMGN1-202ENST00000380747 TRMT2BQ96GJ1 504 aaKnown RBP9.78□□□□□ -0.84
HMGN1-202ENST00000380747 TMEM176AQ96HP8 235 aa9.78□□□□□ -0.84
HMGN1-202ENST00000380747 ASB16Q96NS5 453 aa9.78□□□□□ -0.84
HMGN1-202ENST00000380747 KCNK16Q96T55 309 aa9.78□□□□□ -0.84
HMGN1-202ENST00000380747 PLA2G2FQ9BZM2 168 aa9.78□□□□□ -0.84
HMGN1-202ENST00000380747 TASP1Q9H6P5 420 aa9.78□□□□□ -0.84
HMGN1-202ENST00000380747 DMAP1Q9NPF5 467 aaPredicted RBP9.78□□□□□ -0.84
HMGN1-202ENST00000380747 TMEM30AQ9NV96 361 aa9.78□□□□□ -0.84
HMGN1-202ENST00000380747 EHD2Q9NZN4 543 aa9.78□□□□□ -0.84
HMGN1-202ENST00000380747 GCNT4Q9P109 453 aa9.78□□□□□ -0.84
HMGN1-202ENST00000380747 FBXL21Q9UKT6 434 aa9.78□□□□□ -0.84
HMGN1-202ENST00000380747 PCDHB4Q9Y5E5 795 aa9.78□□□□□ -0.84
HMGN1-202ENST00000380747 CFAP47Q6ZTR5 3102 aa9.78□□□□□ -0.84
HMGN1-202ENST00000380747 SPTBN2O15020 2390 aa9.77□□□□□ -0.85
HMGN1-202ENST00000380747 PI15O43692 258 aa9.77□□□□□ -0.85
HMGN1-202ENST00000380747 BEST1O76090 585 aa9.77□□□□□ -0.85
HMGN1-202ENST00000380747 ABL1P00519 1130 aa9.77□□□□□ -0.85
HMGN1-202ENST00000380747 SRFP11831 508 aa9.77□□□□□ -0.85
HMGN1-202ENST00000380747 SLC9A1P19634 815 aa9.77□□□□□ -0.85
HMGN1-202ENST00000380747 FCARP24071 287 aa9.77□□□□□ -0.85
HMGN1-202ENST00000380747 EEF1GP26641 437 aaKnown RBP9.77□□□□□ -0.85
HMGN1-202ENST00000380747 YWHAQP27348 245 aa9.77□□□□□ -0.85
HMGN1-202ENST00000380747 ABL2P42684 1182 aa9.77□□□□□ -0.85
HMGN1-202ENST00000380747 GPC5P78333 572 aa9.77□□□□□ -0.85
HMGN1-202ENST00000380747 GRM2Q14416 872 aa9.77□□□□□ -0.85
HMGN1-202ENST00000380747 PUM1Q14671 1186 aaKnown RBP eCLIP9.77□□□□□ -0.851e-6■□□□□ 9.6
HMGN1-202ENST00000380747 KLHL40Q2TBA0 621 aa9.77□□□□□ -0.85
HMGN1-202ENST00000380747 VWA3BQ502W6 1294 aa9.77□□□□□ -0.85
HMGN1-202ENST00000380747 TCP11X2Q5H9J9 407 aa9.77□□□□□ -0.85
HMGN1-202ENST00000380747 PPP1R26Q5T8A7 1209 aaPredicted RBP9.77□□□□□ -0.85
HMGN1-202ENST00000380747 TXNDC8Q6A555 127 aa9.77□□□□□ -0.85
HMGN1-202ENST00000380747 TMEM270Q6UE05 265 aa9.77□□□□□ -0.85
HMGN1-202ENST00000380747 GBP6Q6ZN66 633 aa9.77□□□□□ -0.85
HMGN1-202ENST00000380747 MON1AQ86VX9 555 aa9.77□□□□□ -0.85
HMGN1-202ENST00000380747 ARID3BQ8IVW6 561 aaPredicted RBP9.77□□□□□ -0.85
HMGN1-202ENST00000380747 YAF2Q8IY57 180 aa9.77□□□□□ -0.85
HMGN1-202ENST00000380747 NUP93Q8N1F7 819 aa9.77□□□□□ -0.85
HMGN1-202ENST00000380747 MAB21L3Q8N8X9 362 aa9.77□□□□□ -0.85
HMGN1-202ENST00000380747 SLC4A11Q8NBS3 891 aa9.77□□□□□ -0.85
HMGN1-202ENST00000380747 KAT5Q92993 513 aa9.77□□□□□ -0.85
HMGN1-202ENST00000380747 RMDN1Q96DB5 314 aa9.77□□□□□ -0.85
HMGN1-202ENST00000380747 MYRFLQ96LU7 910 aa9.77□□□□□ -0.85
HMGN1-202ENST00000380747 CEP295NLQ96MC4 621 aa9.77□□□□□ -0.85
HMGN1-202ENST00000380747 HNRNPABQ99729 332 aaKnown RBP9.77□□□□□ -0.85
HMGN1-202ENST00000380747 SMOQ99835 787 aa9.77□□□□□ -0.85
HMGN1-202ENST00000380747 TUBGCP2Q9BSJ2 902 aa9.77□□□□□ -0.85
HMGN1-202ENST00000380747 SLC46A2Q9BY10 475 aa9.77□□□□□ -0.85
HMGN1-202ENST00000380747 SMG9Q9H0W8 520 aaKnown RBP9.77□□□□□ -0.85
HMGN1-202ENST00000380747 FAM124BQ9H5Z6 455 aaPredicted RBP9.77□□□□□ -0.85
HMGN1-202ENST00000380747 TRPC7Q9HCX4 862 aa9.77□□□□□ -0.85
HMGN1-202ENST00000380747 PRM3Q9NNZ6 103 aa9.77□□□□□ -0.85
HMGN1-202ENST00000380747 UBE2TQ9NPD8 197 aaPredicted RBP9.77□□□□□ -0.85
HMGN1-202ENST00000380747 TAB2Q9NYJ8 693 aa9.77□□□□□ -0.85
HMGN1-202ENST00000380747 TRPM5Q9NZQ8 1165 aa9.77□□□□□ -0.85
HMGN1-202ENST00000380747 WNT16Q9UBV4 365 aa9.77□□□□□ -0.85
HMGN1-202ENST00000380747 CA14Q9ULX7 337 aa9.77□□□□□ -0.85
HMGN1-202ENST00000380747 NOTCH4Q99466 2003 aa9.77□□□□□ -0.85
HMGN1-202ENST00000380747 CHD8Q9HCK8 2581 aa9.76□□□□□ -0.85
HMGN1-202ENST00000380747 MED19A0JLT2 244 aaPredicted RBP9.76□□□□□ -0.85
HMGN1-202ENST00000380747 HEPACAM2A8MVW5 462 aa9.76□□□□□ -0.85
HMGN1-202ENST00000380747 TADA3O75528 432 aa9.76□□□□□ -0.85
HMGN1-202ENST00000380747 RTN3O95197 1032 aaPredicted RBP9.76□□□□□ -0.85
HMGN1-202ENST00000380747 TPM2P07951 284 aa9.76□□□□□ -0.85
HMGN1-202ENST00000380747 KRT5P13647 590 aa9.76□□□□□ -0.85
HMGN1-202ENST00000380747 ACO1P21399 889 aaKnown RBP9.76□□□□□ -0.85
HMGN1-202ENST00000380747 DDX6P26196 483 aaKnown RBP eCLIP9.76□□□□□ -0.851e-5■■■□□ 17.8
HMGN1-202ENST00000380747 AVPR1AP37288 418 aa9.76□□□□□ -0.85
HMGN1-202ENST00000380747 SLC5A3P53794 718 aa9.76□□□□□ -0.85
HMGN1-202ENST00000380747 MYL5Q02045 173 aa9.76□□□□□ -0.85
HMGN1-202ENST00000380747 APBA1Q02410 837 aa9.76□□□□□ -0.85
HMGN1-202ENST00000380747 GCNT1Q02742 428 aa9.76□□□□□ -0.85
HMGN1-202ENST00000380747 TAF10Q12962 218 aa9.76□□□□□ -0.85
HMGN1-202ENST00000380747 EXOC3L4Q17RC7 722 aa9.76□□□□□ -0.85
HMGN1-202ENST00000380747 GOLGA7BQ2TAP0 167 aa9.76□□□□□ -0.85
HMGN1-202ENST00000380747 ANO6Q4KMQ2 910 aa9.76□□□□□ -0.85
HMGN1-202ENST00000380747 SGO2Q562F6 1265 aa9.76□□□□□ -0.85
HMGN1-202ENST00000380747 PHLDB3Q6NSJ2 640 aa9.76□□□□□ -0.85
HMGN1-202ENST00000380747 GJB7Q6PEY0 223 aa9.76□□□□□ -0.85
HMGN1-202ENST00000380747 TRIM65Q6PJ69 517 aa9.76□□□□□ -0.85
HMGN1-202ENST00000380747 VITQ6UXI7 678 aa9.76□□□□□ -0.85
HMGN1-202ENST00000380747 DGLUCYQ7Z3D6 616 aa9.76□□□□□ -0.85
HMGN1-202ENST00000380747 UBR7Q8N806 425 aa9.76□□□□□ -0.85
HMGN1-202ENST00000380747 RBBP8NLQ8NC74 664 aaPredicted RBP9.76□□□□□ -0.85
HMGN1-202ENST00000380747 TTC16Q8NEE8 873 aa9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms