RNA–Protein interactions for RNA: ENST00000380443.5

VPS16-201, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 1 (best)

Gene VPS16, Length 1,825 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-201ENST00000380443 ALOX15BO15296 676 aa24.15■■□□□ 1.46
VPS16-201ENST00000380443 PAPSS1O43252 624 aaPredicted RBP24.15■■□□□ 1.46
VPS16-201ENST00000380443 CDH16O75309 829 aa24.15■■□□□ 1.46
VPS16-201ENST00000380443 TGM2P21980 687 aa24.15■■□□□ 1.46
VPS16-201ENST00000380443 EIF3EP60228 445 aaKnown RBP24.15■■□□□ 1.46
VPS16-201ENST00000380443 DYNLT1P63172 113 aa24.15■■□□□ 1.46
VPS16-201ENST00000380443 IRX5P78411 483 aaPredicted RBP24.15■■□□□ 1.46
VPS16-201ENST00000380443 TWF2Q6IBS0 349 aaKnown RBP24.15■■□□□ 1.46
VPS16-201ENST00000380443 TRNP1Q6NT89 227 aa24.15■■□□□ 1.46
VPS16-201ENST00000380443 CYP4V2Q6ZWL3 525 aaPredicted RBP24.15■■□□□ 1.46
VPS16-201ENST00000380443 FAM228AQ86W67 206 aa24.15■■□□□ 1.46
VPS16-201ENST00000380443 ZNF473Q8WTR7 871 aaKnown RBP24.15■■□□□ 1.46
VPS16-201ENST00000380443 STAU2Q9NUL3 570 aaKnown RBP eCLIP24.15■■□□□ 1.46
VPS16-201ENST00000380443 GTF2IRD1Q9UHL9 959 aa24.15■■□□□ 1.46
VPS16-201ENST00000380443 FARP1Q9Y4F1 1045 aaPredicted RBP24.15■■□□□ 1.46
VPS16-201ENST00000380443 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP24.14■■□□□ 1.46
VPS16-201ENST00000380443 SLC8A3P57103 927 aa24.14■■□□□ 1.46
VPS16-201ENST00000380443 IFI35P80217 286 aaPredicted RBP24.14■■□□□ 1.46
VPS16-201ENST00000380443 NR1H3Q13133 447 aa24.14■■□□□ 1.46
VPS16-201ENST00000380443 DPYSL3Q14195 570 aa24.14■■□□□ 1.46
VPS16-201ENST00000380443 KRT81Q14533 505 aa24.14■■□□□ 1.46
VPS16-201ENST00000380443 NOMO1Q15155 1222 aa24.14■■□□□ 1.46
VPS16-201ENST00000380443 SRLQ86TD4 932 aa24.14■■□□□ 1.46
VPS16-201ENST00000380443 GLIS1Q8NBF1 620 aa24.14■■□□□ 1.46
VPS16-201ENST00000380443 KHSRPQ92945 711 aaKnown RBP eCLIP24.14■■□□□ 1.46
VPS16-201ENST00000380443 RNF157Q96PX1 679 aa24.14■■□□□ 1.46
VPS16-201ENST00000380443 XPO6Q96QU8 1125 aaKnown RBP24.14■■□□□ 1.46
VPS16-201ENST00000380443 RNF39Q9H2S5 420 aa24.14■■□□□ 1.46
VPS16-201ENST00000380443 CCDC134Q9H6E4 229 aa24.14■■□□□ 1.46
VPS16-201ENST00000380443 KLK14Q9P0G3 267 aa24.14■■□□□ 1.46
VPS16-201ENST00000380443 ACTL7BQ9Y614 415 aa24.14■■□□□ 1.46
VPS16-201ENST00000380443 CFAP69A5D8W1 941 aa24.14■■□□□ 1.45
VPS16-201ENST00000380443 SMIM23A6NLE4 172 aa24.14■■□□□ 1.45
VPS16-201ENST00000380443 IFNB1P01574 187 aa24.14■■□□□ 1.45
VPS16-201ENST00000380443 CD48P09326 243 aa24.14■■□□□ 1.45
VPS16-201ENST00000380443 C6orf222P0C671 652 aaPredicted RBP24.14■■□□□ 1.45
VPS16-201ENST00000380443 ZSCAN5DPP0CG00 497 aa24.14■■□□□ 1.45
VPS16-201ENST00000380443 PECAM1P16284 738 aaPredicted RBP24.14■■□□□ 1.45
VPS16-201ENST00000380443 ADGRF2Q8IZF7 708 aa24.14■■□□□ 1.45
VPS16-201ENST00000380443 CD99L2Q8TCZ2 262 aa24.14■■□□□ 1.45
VPS16-201ENST00000380443 TRAF3IP1Q8TDR0 691 aaPredicted RBP24.14■■□□□ 1.45
VPS16-201ENST00000380443 CENPIQ92674 756 aaPredicted RBP24.14■■□□□ 1.45
VPS16-201ENST00000380443 PRCCQ92733 491 aaPredicted RBP24.14■■□□□ 1.45
VPS16-201ENST00000380443 P3H4Q92791 437 aa24.14■■□□□ 1.45
VPS16-201ENST00000380443 PRDM16Q9HAZ2 1276 aa24.14■■□□□ 1.45
VPS16-201ENST00000380443 SAYSD1Q9NPB0 183 aa24.14■■□□□ 1.45
VPS16-201ENST00000380443 PPANQ9NQ55 473 aaKnown RBP24.14■■□□□ 1.45
VPS16-201ENST00000380443 TRIP12Q14669 1992 aaPredicted RBP24.13■■□□□ 1.45
VPS16-201ENST00000380443 SPTLC1O15269 473 aa24.13■■□□□ 1.45
VPS16-201ENST00000380443 CYBAP13498 195 aa24.13■■□□□ 1.45
VPS16-201ENST00000380443 TSHRP16473 764 aa24.13■■□□□ 1.45
VPS16-201ENST00000380443 FCGRTP55899 365 aa24.13■■□□□ 1.45
VPS16-201ENST00000380443 LILRA4P59901 499 aa24.13■■□□□ 1.45
VPS16-201ENST00000380443 LONRF1Q17RB8 773 aa24.13■■□□□ 1.45
VPS16-201ENST00000380443 C15orf59Q2T9L4 293 aaPredicted RBP24.13■■□□□ 1.45
VPS16-201ENST00000380443 EFHC1Q5JVL4 640 aa24.13■■□□□ 1.45
VPS16-201ENST00000380443 GNASQ5JWF2 1037 aa24.13■■□□□ 1.45
VPS16-201ENST00000380443 UBAP2Q5T6F2 1119 aaKnown RBP24.13■■□□□ 1.45
VPS16-201ENST00000380443 TDRPQ86YL5 185 aa24.13■■□□□ 1.45
VPS16-201ENST00000380443 FAM172AQ8WUF8 416 aa24.13■■□□□ 1.45
VPS16-201ENST00000380443 PPP1R10Q96QC0 940 aaKnown RBP24.13■■□□□ 1.45
VPS16-201ENST00000380443 HNRNPABQ99729 332 aaKnown RBP24.13■■□□□ 1.45
VPS16-201ENST00000380443 ZNF670Q9BS34 389 aa24.13■■□□□ 1.45
VPS16-201ENST00000380443 XPO1O14980 1071 aaKnown RBP24.12■■□□□ 1.45
VPS16-201ENST00000380443 RBP3P10745 1247 aa24.12■■□□□ 1.45
VPS16-201ENST00000380443 FGFR1P11362 822 aa24.12■■□□□ 1.45
VPS16-201ENST00000380443 ETS1P14921 441 aa24.12■■□□□ 1.45
VPS16-201ENST00000380443 CHN1P15882 459 aa24.12■■□□□ 1.45
VPS16-201ENST00000380443 SLCO1A2P46721 670 aa24.12■■□□□ 1.45
VPS16-201ENST00000380443 CBLBQ13191 982 aa24.12■■□□□ 1.45
VPS16-201ENST00000380443 SCUBE3Q8IX30 993 aa24.12■■□□□ 1.45
VPS16-201ENST00000380443 SPATA18Q8TC71 538 aa24.12■■□□□ 1.45
VPS16-201ENST00000380443 PPP1R13LQ8WUF5 828 aa24.12■■□□□ 1.45
VPS16-201ENST00000380443 ARHGEF2Q92974 986 aaKnown RBP24.12■■□□□ 1.45
VPS16-201ENST00000380443 SELENOSQ9BQE4 189 aa24.12■■□□□ 1.45
VPS16-201ENST00000380443 DPEP3Q9H4B8 488 aa24.12■■□□□ 1.45
VPS16-201ENST00000380443 RRP15Q9Y3B9 282 aaKnown RBP24.12■■□□□ 1.45
VPS16-201ENST00000380443 C5orf60A6NFR6 353 aa24.12■■□□□ 1.45
VPS16-201ENST00000380443 TULP2O00295 520 aa24.12■■□□□ 1.45
VPS16-201ENST00000380443 GNRH1P01148 92 aa24.12■■□□□ 1.45
VPS16-201ENST00000380443 ZFXP17010 805 aaPredicted RBP24.12■■□□□ 1.45
VPS16-201ENST00000380443 ARL4CP56559 192 aa24.12■■□□□ 1.45
VPS16-201ENST00000380443 ROR1Q01973 937 aa24.12■■□□□ 1.45
VPS16-201ENST00000380443 RASA2Q15283 850 aa24.12■■□□□ 1.45
VPS16-201ENST00000380443 TAF5Q15542 800 aa24.12■■□□□ 1.45
VPS16-201ENST00000380443 C4orf22Q6V702 233 aa24.12■■□□□ 1.45
VPS16-201ENST00000380443 CTU1Q7Z7A3 348 aaKnown RBP24.12■■□□□ 1.45
VPS16-201ENST00000380443 PRUNE1Q86TP1 453 aa24.12■■□□□ 1.45
VPS16-201ENST00000380443 EXOC3L1Q86VI1 746 aa24.12■■□□□ 1.45
VPS16-201ENST00000380443 FAF2Q96CS3 445 aa24.12■■□□□ 1.45
VPS16-201ENST00000380443 PIWIL1Q96J94 861 aaKnown RBP24.12■■□□□ 1.45
VPS16-201ENST00000380443 C11orf84Q9BUA3 381 aaPredicted RBP24.12■■□□□ 1.45
VPS16-201ENST00000380443 NGRNQ9NPE2 291 aaKnown RBP24.12■■□□□ 1.45
VPS16-201ENST00000380443 INTS9Q9NV88 658 aaKnown RBP24.12■■□□□ 1.45
VPS16-201ENST00000380443 CDY2AQ9Y6F7 541 aa24.12■■□□□ 1.45
VPS16-201ENST00000380443 APOL1O14791 398 aa24.11■■□□□ 1.45
VPS16-201ENST00000380443 PDGFRBP09619 1106 aa24.11■■□□□ 1.45
VPS16-201ENST00000380443 RPL22P35268 128 aaKnown RBP24.11■■□□□ 1.45
VPS16-201ENST00000380443 SOX4Q06945 474 aaPredicted RBP24.11■■□□□ 1.45
VPS16-201ENST00000380443 SH3PXD2AQ5TCZ1 1133 aa24.11■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms