RNA–Protein interactions for RNA: ENST00000379433.5

NEDD9-201, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 1 (best) BASIC

Gene NEDD9, Length 3,341 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-201ENST00000379433 POMCP01189 267 aa11.3□□□□□ -0.6
NEDD9-201ENST00000379433 ZNF865P0CJ78 1059 aaPredicted RBP11.3□□□□□ -0.6
NEDD9-201ENST00000379433 GHRP10912 638 aa11.3□□□□□ -0.6
NEDD9-201ENST00000379433 DARSP14868 501 aaKnown RBP11.3□□□□□ -0.6
NEDD9-201ENST00000379433 CYP3A5P20815 502 aa11.3□□□□□ -0.6
NEDD9-201ENST00000379433 GCKP35557 465 aa11.3□□□□□ -0.6
NEDD9-201ENST00000379433 MLH1P40692 756 aa11.3□□□□□ -0.6
NEDD9-201ENST00000379433 CCNHP51946 323 aaPredicted RBP11.3□□□□□ -0.6
NEDD9-201ENST00000379433 SOX4Q06945 474 aaPredicted RBP11.3□□□□□ -0.6
NEDD9-201ENST00000379433 DHX34Q14147 1143 aaKnown RBP11.3□□□□□ -0.6
NEDD9-201ENST00000379433 LRRC14Q15048 493 aa11.3□□□□□ -0.6
NEDD9-201ENST00000379433 ANKMY2Q8IV38 441 aa11.3□□□□□ -0.6
NEDD9-201ENST00000379433 ADAM32Q8TC27 787 aa11.3□□□□□ -0.6
NEDD9-201ENST00000379433 GTF3C2Q8WUA4 911 aaPredicted RBP11.3□□□□□ -0.6
NEDD9-201ENST00000379433 RXFP2Q8WXD0 754 aa11.3□□□□□ -0.6
NEDD9-201ENST00000379433 GAD1Q99259 594 aa11.3□□□□□ -0.6
NEDD9-201ENST00000379433 DCLK3Q9C098 648 aa11.3□□□□□ -0.6
NEDD9-201ENST00000379433 AVENQ9NQS1 362 aaPredicted RBP11.3□□□□□ -0.6
NEDD9-201ENST00000379433 NRCAMQ92823 1304 aa11.3□□□□□ -0.6
NEDD9-201ENST00000379433 SPTLC1O15269 473 aa11.3□□□□□ -0.6
NEDD9-201ENST00000379433 GPR32O75388 356 aa11.3□□□□□ -0.6
NEDD9-201ENST00000379433 LRCH4O75427 683 aa11.3□□□□□ -0.6
NEDD9-201ENST00000379433 E2F6O75461 281 aa11.3□□□□□ -0.6
NEDD9-201ENST00000379433 MIPP30301 263 aa11.3□□□□□ -0.6
NEDD9-201ENST00000379433 ACTN2P35609 894 aa11.3□□□□□ -0.6
NEDD9-201ENST00000379433 HSPA9P38646 679 aaKnown RBP11.3□□□□□ -0.6
NEDD9-201ENST00000379433 THPOP40225 353 aa11.3□□□□□ -0.6
NEDD9-201ENST00000379433 HTRA3P83110 453 aa11.3□□□□□ -0.6
NEDD9-201ENST00000379433 GAD2Q05329 585 aa11.3□□□□□ -0.6
NEDD9-201ENST00000379433 IZUMO3Q5VZ72 239 aa11.3□□□□□ -0.6
NEDD9-201ENST00000379433 FAM183BPQ6ZVS7 135 aa11.3□□□□□ -0.6
NEDD9-201ENST00000379433 C3orf20Q8ND61 904 aa11.3□□□□□ -0.6
NEDD9-201ENST00000379433 WNT8BQ93098 351 aa11.3□□□□□ -0.6
NEDD9-201ENST00000379433 ATP6V1G3Q96LB4 118 aa11.3□□□□□ -0.6
NEDD9-201ENST00000379433 MED10Q9BTT4 135 aa11.3□□□□□ -0.6
NEDD9-201ENST00000379433 MAK16Q9BXY0 300 aaKnown RBP11.3□□□□□ -0.6
NEDD9-201ENST00000379433 ZFYVE28Q9HCC9 887 aa11.3□□□□□ -0.6
NEDD9-201ENST00000379433 LCMT1Q9UIC8 334 aa11.3□□□□□ -0.6
NEDD9-201ENST00000379433 BARX2Q9UMQ3 279 aaPredicted RBP11.3□□□□□ -0.6
NEDD9-201ENST00000379433 MYO18AQ92614 2054 aaKnown RBP11.3□□□□□ -0.6
NEDD9-201ENST00000379433 SMIM28A0A1B0GU29 152 aa11.3□□□□□ -0.6
NEDD9-201ENST00000379433 EME2A4GXA9 379 aaPredicted RBP11.3□□□□□ -0.6
NEDD9-201ENST00000379433 A6NJR5 290 aa11.3□□□□□ -0.6
NEDD9-201ENST00000379433 PRSS47A8MTI9 375 aa11.3□□□□□ -0.6
NEDD9-201ENST00000379433 YY1P25490 414 aa11.3□□□□□ -0.6
NEDD9-201ENST00000379433 RGS2P41220 211 aa11.3□□□□□ -0.6
NEDD9-201ENST00000379433 SLC1A1P43005 524 aa11.3□□□□□ -0.6
NEDD9-201ENST00000379433 PRKCZQ05513 592 aa11.3□□□□□ -0.6
NEDD9-201ENST00000379433 BYSLQ13895 437 aaKnown RBP11.3□□□□□ -0.6
NEDD9-201ENST00000379433 LRRC31Q6UY01 552 aa11.3□□□□□ -0.6
NEDD9-201ENST00000379433 PACS1Q6VY07 963 aa11.3□□□□□ -0.6
NEDD9-201ENST00000379433 ANKRD42Q8N9B4 389 aa11.3□□□□□ -0.6
NEDD9-201ENST00000379433 BEST2Q8NFU1 509 aa11.3□□□□□ -0.6
NEDD9-201ENST00000379433 TRAF3IP1Q8TDR0 691 aaPredicted RBP11.3□□□□□ -0.6
NEDD9-201ENST00000379433 ADAMTS10Q9H324 1103 aa11.3□□□□□ -0.6
NEDD9-201ENST00000379433 SNX25Q9H3E2 840 aa11.3□□□□□ -0.6
NEDD9-201ENST00000379433 MMADHCQ9H3L0 296 aaPredicted RBP11.3□□□□□ -0.6
NEDD9-201ENST00000379433 ASB7Q9H672 318 aa11.3□□□□□ -0.6
NEDD9-201ENST00000379433 KCNK9Q9NPC2 374 aa11.3□□□□□ -0.6
NEDD9-201ENST00000379433 GNEQ9Y223 722 aaKnown RBP11.3□□□□□ -0.6
NEDD9-201ENST00000379433 RRP15Q9Y3B9 282 aaKnown RBP11.3□□□□□ -0.6
NEDD9-201ENST00000379433 POC1B-GALNT4F8VUJ3 575 aa11.29□□□□□ -0.6
NEDD9-201ENST00000379433 PODXLO00592 558 aa11.29□□□□□ -0.6
NEDD9-201ENST00000379433 NDUFAB1O14561 156 aa11.29□□□□□ -0.6
NEDD9-201ENST00000379433 CPT1AP50416 773 aa11.29□□□□□ -0.6
NEDD9-201ENST00000379433 IRAK1P51617 712 aa11.29□□□□□ -0.6
NEDD9-201ENST00000379433 HADHBP55084 474 aaKnown RBP11.29□□□□□ -0.6
NEDD9-201ENST00000379433 BASP1P80723 227 aaKnown RBP11.29□□□□□ -0.6
NEDD9-201ENST00000379433 ACTL9Q8TC94 416 aa11.29□□□□□ -0.6
NEDD9-201ENST00000379433 SLC2A14Q8TDB8 520 aa11.29□□□□□ -0.6
NEDD9-201ENST00000379433 SLITRK1Q96PX8 696 aa11.29□□□□□ -0.6
NEDD9-201ENST00000379433 PAAF1Q9BRP4 392 aa11.29□□□□□ -0.6
NEDD9-201ENST00000379433 ZMAT5Q9UDW3 170 aaKnown RBP11.29□□□□□ -0.6
NEDD9-201ENST00000379433 MAGED2Q9UNF1 606 aaPredicted RBP11.29□□□□□ -0.6
NEDD9-201ENST00000379433 RANBP2P49792 3224 aaKnown RBP11.29□□□□□ -0.6
NEDD9-201ENST00000379433 M0QZ92 97 aa11.29□□□□□ -0.6
NEDD9-201ENST00000379433 FSCN2O14926 492 aa11.29□□□□□ -0.6
NEDD9-201ENST00000379433 RGS16O15492 202 aaPredicted RBP11.29□□□□□ -0.6
NEDD9-201ENST00000379433 F2P00734 622 aa11.29□□□□□ -0.6
NEDD9-201ENST00000379433 RBP3P10745 1247 aa11.29□□□□□ -0.6
NEDD9-201ENST00000379433 GNL1P36915 607 aaPredicted RBP11.29□□□□□ -0.6
NEDD9-201ENST00000379433 OTUD4Q01804 1114 aaKnown RBP11.29□□□□□ -0.6
NEDD9-201ENST00000379433 KRT81Q14533 505 aa11.29□□□□□ -0.6
NEDD9-201ENST00000379433 KRT72Q14CN4 511 aa11.29□□□□□ -0.6
NEDD9-201ENST00000379433 SPOCD1Q6ZMY3 1216 aa11.29□□□□□ -0.6
NEDD9-201ENST00000379433 XYLT1Q86Y38 959 aa11.29□□□□□ -0.6
NEDD9-201ENST00000379433 ARFGAP1Q8N6T3 406 aa11.29□□□□□ -0.6
NEDD9-201ENST00000379433 CCDC89Q8N998 374 aa11.29□□□□□ -0.6
NEDD9-201ENST00000379433 FAM71DQ8N9W8 422 aa11.29□□□□□ -0.6
NEDD9-201ENST00000379433 ATP11CQ8NB49 1132 aa11.29□□□□□ -0.6
NEDD9-201ENST00000379433 ZFPM2Q8WW38 1151 aa11.29□□□□□ -0.6
NEDD9-201ENST00000379433 CDC42EP4Q9H3Q1 356 aaKnown RBP11.29□□□□□ -0.6
NEDD9-201ENST00000379433 TMPRSS4Q9NRS4 437 aa11.29□□□□□ -0.6
NEDD9-201ENST00000379433 ZDHHC18Q9NUE0 388 aa11.29□□□□□ -0.6
NEDD9-201ENST00000379433 TMA7Q9Y2S6 64 aaKnown RBP11.29□□□□□ -0.6
NEDD9-201ENST00000379433 MGAMO43451 1857 aa11.29□□□□□ -0.6
NEDD9-201ENST00000379433 FAM187AA6NFU0 413 aa11.29□□□□□ -0.6
NEDD9-201ENST00000379433 RRN3P2A6NIE6 340 aa11.29□□□□□ -0.6
NEDD9-201ENST00000379433 ATP6V1G1O75348 118 aa11.29□□□□□ -0.6
NEDD9-201ENST00000379433 RPS6KA5O75582 802 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms