RNA–Protein interactions for RNA: ENST00000379053.4

LINC00654-201, long intergenic non-protein coding RNA 654, humanhuman

TSL 1 (best) BASIC

Gene LINC00654, Length 6,113 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00654-201ENST00000379053 ZNF555Q8NEP9 628 aa11.31□□□□□ -0.6
LINC00654-201ENST00000379053 GRAMD1AQ96CP6 724 aa11.31□□□□□ -0.6
LINC00654-201ENST00000379053 CBWD1Q9BRT8 395 aa11.31□□□□□ -0.6
LINC00654-201ENST00000379053 NT5MQ9NPB1 228 aa11.31□□□□□ -0.6
LINC00654-201ENST00000379053 GPATCH2LQ9NWQ4 482 aa11.31□□□□□ -0.6
LINC00654-201ENST00000379053 A0A1B0GTH6 734 aa11.31□□□□□ -0.6
LINC00654-201ENST00000379053 ENO1P06733 434 aaKnown RBP11.31□□□□□ -0.6
LINC00654-201ENST00000379053 CASP4P49662 377 aa11.31□□□□□ -0.6
LINC00654-201ENST00000379053 SLC16A1P53985 500 aa11.31□□□□□ -0.6
LINC00654-201ENST00000379053 CENPCQ03188 943 aa11.31□□□□□ -0.6
LINC00654-201ENST00000379053 LONRF1Q17RB8 773 aa11.31□□□□□ -0.6
LINC00654-201ENST00000379053 RARS2Q5T160 578 aaKnown RBP11.31□□□□□ -0.6
LINC00654-201ENST00000379053 C4orf19Q8IY42 314 aa11.31□□□□□ -0.6
LINC00654-201ENST00000379053 ADNPQ9H2P0 1102 aa11.31□□□□□ -0.6
LINC00654-201ENST00000379053 ZSCAN32Q9NX65 697 aa11.31□□□□□ -0.6
LINC00654-201ENST00000379053 FZD1Q9UP38 647 aa11.31□□□□□ -0.6
LINC00654-201ENST00000379053 TRPM1Q7Z4N2 1603 aa11.31□□□□□ -0.6
LINC00654-201ENST00000379053 IL1R1P14778 569 aa11.31□□□□□ -0.6
LINC00654-201ENST00000379053 ACAT1P24752 427 aaKnown RBP11.31□□□□□ -0.6
LINC00654-201ENST00000379053 CTNNB1P35222 781 aa11.31□□□□□ -0.6
LINC00654-201ENST00000379053 GYS2P54840 703 aa11.31□□□□□ -0.6
LINC00654-201ENST00000379053 TRMT11Q7Z4G4 463 aaKnown RBP11.31□□□□□ -0.6
LINC00654-201ENST00000379053 HORMAD1Q86X24 394 aa11.31□□□□□ -0.6
LINC00654-201ENST00000379053 PPIL6Q8IXY8 311 aa11.31□□□□□ -0.6
LINC00654-201ENST00000379053 ERLEC1Q96DZ1 483 aa11.31□□□□□ -0.6
LINC00654-201ENST00000379053 ADAM21Q9UKJ8 722 aa11.31□□□□□ -0.6
LINC00654-201ENST00000379053 ITGA11Q9UKX5 1188 aa11.31□□□□□ -0.6
LINC00654-201ENST00000379053 RPS6KL1Q9Y6S9 549 aa11.31□□□□□ -0.6
LINC00654-201ENST00000379053 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP11.3□□□□□ -0.6
LINC00654-201ENST00000379053 TUFMP49411 452 aaKnown RBP11.3□□□□□ -0.6
LINC00654-201ENST00000379053 TBX4P57082 545 aa11.3□□□□□ -0.6
LINC00654-201ENST00000379053 MYL6P60660 151 aa11.3□□□□□ -0.6
LINC00654-201ENST00000379053 IQSEC1Q6DN90 963 aa11.3□□□□□ -0.6
LINC00654-201ENST00000379053 PLEKHM3Q6ZWE6 761 aa11.3□□□□□ -0.6
LINC00654-201ENST00000379053 MTSS1LQ765P7 747 aa11.3□□□□□ -0.6
LINC00654-201ENST00000379053 SLC44A2Q8IWA5 706 aaPredicted RBP11.3□□□□□ -0.6
LINC00654-201ENST00000379053 CLEC4FQ8N1N0 589 aa11.3□□□□□ -0.6
LINC00654-201ENST00000379053 ICA1LQ8NDH6 482 aa11.3□□□□□ -0.6
LINC00654-201ENST00000379053 FAM136AQ96C01 138 aa11.3□□□□□ -0.6
LINC00654-201ENST00000379053 TMEM176AQ96HP8 235 aa11.3□□□□□ -0.6
LINC00654-201ENST00000379053 WNK4Q96J92 1243 aa11.3□□□□□ -0.6
LINC00654-201ENST00000379053 FAR2Q96K12 515 aa11.3□□□□□ -0.6
LINC00654-201ENST00000379053 KLF6Q99612 283 aaPredicted RBP11.3□□□□□ -0.6
LINC00654-201ENST00000379053 MRPL17Q9NRX2 175 aaKnown RBP11.3□□□□□ -0.6
LINC00654-201ENST00000379053 NOP53Q9NZM5 478 aaKnown RBP11.3□□□□□ -0.6
LINC00654-201ENST00000379053 GRID1Q9ULK0 1009 aa11.3□□□□□ -0.6
LINC00654-201ENST00000379053 GSNP06396 782 aa11.3□□□□□ -0.6
LINC00654-201ENST00000379053 YWHAQP27348 245 aa11.3□□□□□ -0.6
LINC00654-201ENST00000379053 HDAC4P56524 1084 aa11.3□□□□□ -0.6
LINC00654-201ENST00000379053 MROH9Q5TGP6 573 aa11.3□□□□□ -0.6
LINC00654-201ENST00000379053 AGAP9Q5VTM2 703 aa11.3□□□□□ -0.6
LINC00654-201ENST00000379053 TTC39BQ5VTQ0 682 aaPredicted RBP11.3□□□□□ -0.6
LINC00654-201ENST00000379053 CACHD1Q5VU97 1274 aa11.3□□□□□ -0.6
LINC00654-201ENST00000379053 PALB2Q86YC2 1186 aa11.3□□□□□ -0.6
LINC00654-201ENST00000379053 C7orf61Q8IZ16 206 aa11.3□□□□□ -0.6
LINC00654-201ENST00000379053 DIS3LQ8TF46 1054 aaKnown RBP11.3□□□□□ -0.6
LINC00654-201ENST00000379053 SLC20A1Q8WUM9 679 aa11.3□□□□□ -0.6
LINC00654-201ENST00000379053 EDEM1Q92611 657 aa11.3□□□□□ -0.6
LINC00654-201ENST00000379053 ADAM2Q99965 735 aa11.3□□□□□ -0.6
LINC00654-201ENST00000379053 CYP3A43Q9HB55 503 aa11.3□□□□□ -0.6
LINC00654-201ENST00000379053 GTF3C4Q9UKN8 822 aa11.3□□□□□ -0.6
LINC00654-201ENST00000379053 EIF3LQ9Y262 564 aaKnown RBP11.3□□□□□ -0.6
LINC00654-201ENST00000379053 SNCAIPQ9Y6H5 919 aa11.3□□□□□ -0.6
LINC00654-201ENST00000379053 SEC24DO94855 1032 aaPredicted RBP11.3□□□□□ -0.6
LINC00654-201ENST00000379053 CCR1P32246 355 aa11.3□□□□□ -0.6
LINC00654-201ENST00000379053 MAP2K5Q13163 448 aa11.3□□□□□ -0.6
LINC00654-201ENST00000379053 RBBP8Q99708 897 aa11.3□□□□□ -0.6
LINC00654-201ENST00000379053 RPS6KB2Q9UBS0 482 aa11.3□□□□□ -0.6
LINC00654-201ENST00000379053 TBC1D3BA6NDS4 549 aa11.3□□□□□ -0.6
LINC00654-201ENST00000379053 MSH3P20585 1137 aa11.3□□□□□ -0.6
LINC00654-201ENST00000379053 STIP1P31948 543 aaKnown RBP11.3□□□□□ -0.6
LINC00654-201ENST00000379053 MAGEA4P43358 317 aa11.3□□□□□ -0.6
LINC00654-201ENST00000379053 OAZ1P54368 228 aa11.3□□□□□ -0.6
LINC00654-201ENST00000379053 CREMQ03060 361 aa11.3□□□□□ -0.6
LINC00654-201ENST00000379053 VGLL4Q14135 290 aa11.3□□□□□ -0.6
LINC00654-201ENST00000379053 PDK2Q15119 407 aa11.3□□□□□ -0.6
LINC00654-201ENST00000379053 LPCAT1Q8NF37 534 aa11.3□□□□□ -0.6
LINC00654-201ENST00000379053 SUSD6Q92537 303 aa11.3□□□□□ -0.6
LINC00654-201ENST00000379053 FOXP3Q9BZS1 431 aa11.3□□□□□ -0.6
LINC00654-201ENST00000379053 PDGFDQ9GZP0 370 aaPredicted RBP11.3□□□□□ -0.6
LINC00654-201ENST00000379053 IL1RL2Q9HB29 575 aa11.3□□□□□ -0.6
LINC00654-201ENST00000379053 AP4E1Q9UPM8 1137 aa11.3□□□□□ -0.6
LINC00654-201ENST00000379053 HCN4Q9Y3Q4 1203 aa11.3□□□□□ -0.6
LINC00654-201ENST00000379053 AKAP10O43572 662 aa11.29□□□□□ -0.6
LINC00654-201ENST00000379053 SOX10P56693 466 aa11.29□□□□□ -0.6
LINC00654-201ENST00000379053 PPIL2Q13356 520 aa11.29□□□□□ -0.6
LINC00654-201ENST00000379053 KCNT1Q5JUK3 1230 aa11.29□□□□□ -0.6
LINC00654-201ENST00000379053 SLC30A10Q6XR72 485 aa11.29□□□□□ -0.6
LINC00654-201ENST00000379053 NT5DC3Q86UY8 548 aa11.29□□□□□ -0.6
LINC00654-201ENST00000379053 LRRC1Q9BTT6 524 aa11.29□□□□□ -0.6
LINC00654-201ENST00000379053 FICDQ9BVA6 458 aa11.29□□□□□ -0.6
LINC00654-201ENST00000379053 ATP13A1Q9HD20 1204 aa11.29□□□□□ -0.6
LINC00654-201ENST00000379053 RWDD3Q9Y3V2 267 aa11.29□□□□□ -0.6
LINC00654-201ENST00000379053 KPNA3O00505 521 aaPredicted RBP11.29□□□□□ -0.6
LINC00654-201ENST00000379053 ZNF185O15231 689 aa11.29□□□□□ -0.6
LINC00654-201ENST00000379053 CCL23P55773 120 aa11.29□□□□□ -0.6
LINC00654-201ENST00000379053 GRB10Q13322 594 aa11.29□□□□□ -0.6
LINC00654-201ENST00000379053 FBXW10Q5XX13 1052 aa11.29□□□□□ -0.6
LINC00654-201ENST00000379053 CXCL17Q6UXB2 119 aa11.29□□□□□ -0.6
LINC00654-201ENST00000379053 SLAIN1Q8ND83 568 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms