RNA–Protein interactions for RNA: ENST00000378679.7

SHROOM1-203, Transcript of shroom family member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SHROOM1, Length 4,019 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-203ENST00000378679 UNC93AQ86WB7 457 aa14.75□□□□□ -0.05
SHROOM1-203ENST00000378679 ATP6V1E2Q96A05 226 aa14.75□□□□□ -0.05
SHROOM1-203ENST00000378679 SPDL1Q96EA4 605 aa14.75□□□□□ -0.05
SHROOM1-203ENST00000378679 KANSL3Q9P2N6 904 aa14.75□□□□□ -0.05
SHROOM1-203ENST00000378679 DCTN4Q9UJW0 460 aa14.75□□□□□ -0.05
SHROOM1-203ENST00000378679 ADGRA3Q8IWK6 1321 aa14.74□□□□□ -0.05
SHROOM1-203ENST00000378679 HOXA2O43364 376 aa14.74□□□□□ -0.05
SHROOM1-203ENST00000378679 GMNNO75496 209 aa14.74□□□□□ -0.05
SHROOM1-203ENST00000378679 PDHA1P08559 390 aa14.74□□□□□ -0.05
SHROOM1-203ENST00000378679 FAM153BP0C7A2 387 aa14.74□□□□□ -0.05
SHROOM1-203ENST00000378679 SLC6A3Q01959 620 aa14.74□□□□□ -0.05
SHROOM1-203ENST00000378679 PCBP1Q15365 356 aaKnown RBP eCLIP14.74□□□□□ -0.05
SHROOM1-203ENST00000378679 C15orf59Q2T9L4 293 aaPredicted RBP14.74□□□□□ -0.05
SHROOM1-203ENST00000378679 FAM153CQ494X1 144 aa14.74□□□□□ -0.05
SHROOM1-203ENST00000378679 ALG3Q92685 438 aa14.74□□□□□ -0.05
SHROOM1-203ENST00000378679 EXT2Q93063 718 aa14.74□□□□□ -0.05
SHROOM1-203ENST00000378679 TRIM55Q9BYV6 548 aa14.74□□□□□ -0.05
SHROOM1-203ENST00000378679 DCLK3Q9C098 648 aa14.74□□□□□ -0.05
SHROOM1-203ENST00000378679 PSD3Q9NYI0 1048 aa14.74□□□□□ -0.05
SHROOM1-203ENST00000378679 FAM153AQ9UHL3 310 aa14.74□□□□□ -0.05
SHROOM1-203ENST00000378679 SLC8A2Q9UPR5 921 aa14.74□□□□□ -0.05
SHROOM1-203ENST00000378679 CNTNAP2Q9UHC6 1331 aa14.74□□□□□ -0.05
SHROOM1-203ENST00000378679 BTNL10A8MVZ5 291 aa14.74□□□□□ -0.05
SHROOM1-203ENST00000378679 RBAK-RBAKDNI3L0D1 243 aa14.74□□□□□ -0.05
SHROOM1-203ENST00000378679 TXNDC9O14530 226 aa14.74□□□□□ -0.05
SHROOM1-203ENST00000378679 ZBTB24O43167 697 aaPredicted RBP14.74□□□□□ -0.05
SHROOM1-203ENST00000378679 SMIM24O75264 130 aa14.74□□□□□ -0.05
SHROOM1-203ENST00000378679 LSP1P33241 339 aa14.74□□□□□ -0.05
SHROOM1-203ENST00000378679 HSPA9P38646 679 aaKnown RBP14.74□□□□□ -0.05
SHROOM1-203ENST00000378679 VCPP55072 806 aaKnown RBP14.74□□□□□ -0.05
SHROOM1-203ENST00000378679 ZNF200P98182 395 aaPredicted RBP14.74□□□□□ -0.05
SHROOM1-203ENST00000378679 CNPY4Q8N129 248 aa14.74□□□□□ -0.05
SHROOM1-203ENST00000378679 C18orf25Q96B23 403 aaPredicted RBP14.74□□□□□ -0.05
SHROOM1-203ENST00000378679 RPRD1AQ96P16 312 aaPredicted RBP14.74□□□□□ -0.05
SHROOM1-203ENST00000378679 ROPN1BQ9BZX4 212 aaPredicted RBP14.74□□□□□ -0.05
SHROOM1-203ENST00000378679 ROPN1Q9HAT0 212 aaPredicted RBP14.74□□□□□ -0.05
SHROOM1-203ENST00000378679 WHRNQ9P202 907 aa14.74□□□□□ -0.05
SHROOM1-203ENST00000378679 TOGARAM1Q9Y4F4 1720 aa14.74□□□□□ -0.05
SHROOM1-203ENST00000378679 SIGLEC16A6NMB1 481 aa14.74□□□□□ -0.05
SHROOM1-203ENST00000378679 SMAPO00193 183 aa14.74□□□□□ -0.05
SHROOM1-203ENST00000378679 PTPN1P18031 435 aaKnown RBP14.74□□□□□ -0.05
SHROOM1-203ENST00000378679 PAPOLAP51003 745 aaKnown RBP14.74□□□□□ -0.05
SHROOM1-203ENST00000378679 POU5F1BQ06416 359 aa14.74□□□□□ -0.05
SHROOM1-203ENST00000378679 BIRC2Q13490 618 aa14.74□□□□□ -0.05
SHROOM1-203ENST00000378679 ACCSLQ4AC99 568 aa14.74□□□□□ -0.05
SHROOM1-203ENST00000378679 FAM171A1Q5VUB5 890 aa14.74□□□□□ -0.05
SHROOM1-203ENST00000378679 IL31Q6EBC2 164 aa14.74□□□□□ -0.05
SHROOM1-203ENST00000378679 ZNF280DQ6N043 979 aa14.74□□□□□ -0.05
SHROOM1-203ENST00000378679 RAB44Q7Z6P3 723 aaPredicted RBP14.74□□□□□ -0.05
SHROOM1-203ENST00000378679 CRLF3Q8IUI8 442 aa14.74□□□□□ -0.05
SHROOM1-203ENST00000378679 HOMEZQ8IX15 550 aa14.74□□□□□ -0.05
SHROOM1-203ENST00000378679 ZNF473Q8WTR7 871 aaKnown RBP14.74□□□□□ -0.05
SHROOM1-203ENST00000378679 ZBED3Q96IU2 234 aaPredicted RBP14.74□□□□□ -0.05
SHROOM1-203ENST00000378679 MARF1Q9Y4F3 1742 aaKnown RBP14.73□□□□□ -0.05
SHROOM1-203ENST00000378679 COL1A2P08123 1366 aa14.73□□□□□ -0.05
SHROOM1-203ENST00000378679 CABYRO75952 493 aa14.73□□□□□ -0.05
SHROOM1-203ENST00000378679 CHN1P15882 459 aa14.73□□□□□ -0.05
SHROOM1-203ENST00000378679 BDNFP23560 247 aa14.73□□□□□ -0.05
SHROOM1-203ENST00000378679 HOXD13P35453 343 aa14.73□□□□□ -0.05
SHROOM1-203ENST00000378679 NUMBP49757 651 aa14.73□□□□□ -0.05
SHROOM1-203ENST00000378679 TSTA3Q13630 321 aaPredicted RBP14.73□□□□□ -0.05
SHROOM1-203ENST00000378679 PCSK7Q16549 785 aa14.73□□□□□ -0.05
SHROOM1-203ENST00000378679 KLC3Q6P597 504 aa14.73□□□□□ -0.05
SHROOM1-203ENST00000378679 C1orf127Q8N9H9 656 aa14.73□□□□□ -0.05
SHROOM1-203ENST00000378679 IPMKQ8NFU5 416 aa14.73□□□□□ -0.05
SHROOM1-203ENST00000378679 CDC42EP4Q9H3Q1 356 aaKnown RBP14.73□□□□□ -0.05
SHROOM1-203ENST00000378679 GOLGA2P5Q9HBQ8 144 aa14.73□□□□□ -0.05
SHROOM1-203ENST00000378679 DNPEPQ9ULA0 475 aa14.73□□□□□ -0.05
SHROOM1-203ENST00000378679 ZC3H4Q9UPT8 1303 aaKnown RBP14.73□□□□□ -0.05
SHROOM1-203ENST00000378679 MSCO60682 206 aa14.73□□□□□ -0.05
SHROOM1-203ENST00000378679 DUSP11O75319 330 aaKnown RBP14.73□□□□□ -0.05
SHROOM1-203ENST00000378679 ARHGAP1Q07960 439 aa14.73□□□□□ -0.05
SHROOM1-203ENST00000378679 PHF13Q86YI8 300 aaPredicted RBP14.73□□□□□ -0.05
SHROOM1-203ENST00000378679 WDR75Q8IWA0 830 aaKnown RBP14.73□□□□□ -0.05
SHROOM1-203ENST00000378679 TBCBQ99426 244 aa14.73□□□□□ -0.05
SHROOM1-203ENST00000378679 SPATS2LQ9NUQ6 558 aaKnown RBP14.73□□□□□ -0.05
SHROOM1-203ENST00000378679 PSMC3IPQ9P2W1 217 aaPredicted RBP14.73□□□□□ -0.05
SHROOM1-203ENST00000378679 MTSS1O43312 755 aa14.73□□□□□ -0.05
SHROOM1-203ENST00000378679 IRF1P10914 325 aa14.73□□□□□ -0.05
SHROOM1-203ENST00000378679 RPL21P46778 160 aaKnown RBP14.73□□□□□ -0.05
SHROOM1-203ENST00000378679 ANO4Q32M45 955 aa14.73□□□□□ -0.05
SHROOM1-203ENST00000378679 AGBL2Q5U5Z8 902 aa14.73□□□□□ -0.05
SHROOM1-203ENST00000378679 NUDCD3Q8IVD9 361 aa14.73□□□□□ -0.05
SHROOM1-203ENST00000378679 STKLD1Q8NE28 680 aa14.73□□□□□ -0.05
SHROOM1-203ENST00000378679 BHMTQ93088 406 aa14.73□□□□□ -0.05
SHROOM1-203ENST00000378679 HES6Q96HZ4 224 aa14.73□□□□□ -0.05
SHROOM1-203ENST00000378679 ULBP1Q9BZM6 244 aa14.73□□□□□ -0.05
SHROOM1-203ENST00000378679 FAM129AQ9BZQ8 928 aa14.73□□□□□ -0.05
SHROOM1-203ENST00000378679 FAM105AQ9NUU6 356 aa14.73□□□□□ -0.05
SHROOM1-203ENST00000378679 NCANO14594 1321 aa14.73□□□□□ -0.05
SHROOM1-203ENST00000378679 TBKBP1A7MCY6 615 aa14.72□□□□□ -0.05
SHROOM1-203ENST00000378679 C22orf31O95567 290 aa14.72□□□□□ -0.05
SHROOM1-203ENST00000378679 CYP2F1P24903 491 aa14.72□□□□□ -0.05
SHROOM1-203ENST00000378679 POLE2P56282 527 aa14.72□□□□□ -0.05
SHROOM1-203ENST00000378679 EFEMP1Q12805 493 aa14.72□□□□□ -0.05
SHROOM1-203ENST00000378679 TAF11Q15544 211 aa14.72□□□□□ -0.05
SHROOM1-203ENST00000378679 ERMARDQ5T6L9 678 aa14.72□□□□□ -0.05
SHROOM1-203ENST00000378679 PIGZQ86VD9 579 aa14.72□□□□□ -0.05
SHROOM1-203ENST00000378679 ZFP42Q96MM3 310 aa14.72□□□□□ -0.05
SHROOM1-203ENST00000378679 MTIF3Q9H2K0 278 aaKnown RBP14.72□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 68.7 ms