RNA–Protein interactions for RNA: ENST00000378198.8

TDP2-202, Transcript of tyrosyl-DNA phosphodiesterase 2, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TDP2, Length 2,071 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP2-202ENST00000378198 LONP2Q86WA8 852 aa18.96■□□□□ 0.63
TDP2-202ENST00000378198 TTC39CQ8N584 583 aa18.96■□□□□ 0.63
TDP2-202ENST00000378198 MAB21L3Q8N8X9 362 aa18.96■□□□□ 0.63
TDP2-202ENST00000378198 UBA3Q8TBC4 463 aa18.96■□□□□ 0.63
TDP2-202ENST00000378198 TRAF3IP1Q8TDR0 691 aaPredicted RBP18.96■□□□□ 0.63
TDP2-202ENST00000378198 RXFP2Q8WXD0 754 aa18.96■□□□□ 0.63
TDP2-202ENST00000378198 FAF2Q96CS3 445 aa18.96■□□□□ 0.63
TDP2-202ENST00000378198 FGD4Q96M96 766 aa18.96■□□□□ 0.63
TDP2-202ENST00000378198 RNF157Q96PX1 679 aa18.96■□□□□ 0.63
TDP2-202ENST00000378198 TUBB6Q9BUF5 446 aa18.96■□□□□ 0.63
TDP2-202ENST00000378198 TRIM55Q9BYV6 548 aa18.96■□□□□ 0.63
TDP2-202ENST00000378198 BARX2Q9UMQ3 279 aaPredicted RBP18.96■□□□□ 0.63
TDP2-202ENST00000378198 RPL26L1Q9UNX3 145 aaKnown RBP18.96■□□□□ 0.63
TDP2-202ENST00000378198 LOC102724159A0A0B4J2E5 919 aa18.96■□□□□ 0.63
TDP2-202ENST00000378198 PRPSAP2O60256 369 aa18.96■□□□□ 0.63
TDP2-202ENST00000378198 IQCF3P0C7M6 154 aa18.96■□□□□ 0.63
TDP2-202ENST00000378198 PDGFRAP16234 1089 aa18.96■□□□□ 0.63
TDP2-202ENST00000378198 YWHAGP61981 247 aaKnown RBP eCLIP18.96■□□□□ 0.63
TDP2-202ENST00000378198 MTM1Q13496 603 aa18.96■□□□□ 0.63
TDP2-202ENST00000378198 PWP2Q15269 919 aaKnown RBP18.96■□□□□ 0.63
TDP2-202ENST00000378198 KYAT1Q16773 422 aa18.96■□□□□ 0.63
TDP2-202ENST00000378198 KBTBD12Q3ZCT8 623 aa18.96■□□□□ 0.63
TDP2-202ENST00000378198 OR6B2Q6IFH4 312 aa18.96■□□□□ 0.63
TDP2-202ENST00000378198 HPDLQ96IR7 371 aa18.96■□□□□ 0.63
TDP2-202ENST00000378198 ANKRD27Q96NW4 1050 aa18.96■□□□□ 0.63
TDP2-202ENST00000378198 TSSK1BQ9BXA7 367 aa18.96■□□□□ 0.63
TDP2-202ENST00000378198 CFAP69A5D8W1 941 aa18.95■□□□□ 0.62
TDP2-202ENST00000378198 CNMDO75829 334 aa18.95■□□□□ 0.62
TDP2-202ENST00000378198 TGDSO95455 350 aa18.95■□□□□ 0.62
TDP2-202ENST00000378198 CBX6O95503 412 aa18.95■□□□□ 0.62
TDP2-202ENST00000378198 ETV4P43268 484 aa18.95■□□□□ 0.62
TDP2-202ENST00000378198 INCA1Q0VD86 236 aa18.95■□□□□ 0.62
TDP2-202ENST00000378198 KRT81Q14533 505 aa18.95■□□□□ 0.62
TDP2-202ENST00000378198 CRYMQ14894 314 aa18.95■□□□□ 0.62
TDP2-202ENST00000378198 PLEKHG4Q58EX7 1191 aa18.95■□□□□ 0.62
TDP2-202ENST00000378198 WASHC2DQ5SRD0 308 aa18.95■□□□□ 0.62
TDP2-202ENST00000378198 SH3PXD2AQ5TCZ1 1133 aa18.95■□□□□ 0.62
TDP2-202ENST00000378198 CCDC62Q6P9F0 684 aa18.95■□□□□ 0.62
TDP2-202ENST00000378198 LCLAT1Q6UWP7 414 aa18.95■□□□□ 0.62
TDP2-202ENST00000378198 ILDR2Q71H61 639 aa18.95■□□□□ 0.62
TDP2-202ENST00000378198 CLNKQ7Z7G1 428 aa18.95■□□□□ 0.62
TDP2-202ENST00000378198 MTDHQ86UE4 582 aaKnown RBP18.95■□□□□ 0.62
TDP2-202ENST00000378198 FAM13CQ8NE31 585 aa18.95■□□□□ 0.62
TDP2-202ENST00000378198 SERAC1Q96JX3 654 aa18.95■□□□□ 0.62
TDP2-202ENST00000378198 TLE6Q9H808 572 aa18.95■□□□□ 0.62
TDP2-202ENST00000378198 IFT122Q9HBG6 1241 aa18.95■□□□□ 0.62
TDP2-202ENST00000378198 CSADQ9Y600 493 aa18.95■□□□□ 0.62
TDP2-202ENST00000378198 CITO14578 2027 aa18.95■□□□□ 0.62
TDP2-202ENST00000378198 ZBTB7AO95365 584 aa18.94■□□□□ 0.62
TDP2-202ENST00000378198 C22orf31O95567 290 aa18.94■□□□□ 0.62
TDP2-202ENST00000378198 PGK2P07205 417 aa18.94■□□□□ 0.62
TDP2-202ENST00000378198 TGM2P21980 687 aa18.94■□□□□ 0.62
TDP2-202ENST00000378198 NRLP54845 237 aa18.94■□□□□ 0.62
TDP2-202ENST00000378198 FAAP100Q0VG06 881 aa18.94■□□□□ 0.62
TDP2-202ENST00000378198 BOLA3Q53S33 107 aa18.94■□□□□ 0.62
TDP2-202ENST00000378198 C1orf228Q6PIY5 440 aa18.94■□□□□ 0.62
TDP2-202ENST00000378198 SH2D5Q6ZV89 423 aa18.94■□□□□ 0.62
TDP2-202ENST00000378198 FAM183BPQ6ZVS7 135 aa18.94■□□□□ 0.62
TDP2-202ENST00000378198 IFNLR1Q8IU57 520 aaPredicted RBP18.94■□□□□ 0.62
TDP2-202ENST00000378198 TMEM130Q8N3G9 435 aa18.94■□□□□ 0.62
TDP2-202ENST00000378198 RFWD2Q8NHY2 731 aa18.94■□□□□ 0.62
TDP2-202ENST00000378198 SH3TC2Q8TF17 1288 aa18.94■□□□□ 0.62
TDP2-202ENST00000378198 CNKSR2Q8WXI2 1034 aa18.94■□□□□ 0.62
TDP2-202ENST00000378198 RTP4Q96DX8 246 aa18.94■□□□□ 0.62
TDP2-202ENST00000378198 C12orf65Q9H3J6 166 aaKnown RBP18.94■□□□□ 0.62
TDP2-202ENST00000378198 RNPEPL1Q9HAU8 725 aa18.94■□□□□ 0.62
TDP2-202ENST00000378198 USP29Q9HBJ7 922 aa18.94■□□□□ 0.62
TDP2-202ENST00000378198 BATF3Q9NR55 127 aa18.94■□□□□ 0.62
TDP2-202ENST00000378198 KANSL3Q9P2N6 904 aa18.94■□□□□ 0.62
TDP2-202ENST00000378198 PPP1R1BQ9UD71 204 aaPredicted RBP18.94■□□□□ 0.62
TDP2-202ENST00000378198 E7ENQ6 273 aa18.94■□□□□ 0.62
TDP2-202ENST00000378198 IRF6O14896 467 aa18.94■□□□□ 0.62
TDP2-202ENST00000378198 STAU1O95793 577 aaKnown RBP18.94■□□□□ 0.62
TDP2-202ENST00000378198 IL1BP01584 269 aa18.94■□□□□ 0.62
TDP2-202ENST00000378198 CALB2P22676 271 aa18.94■□□□□ 0.62
TDP2-202ENST00000378198 NDST1P52848 882 aa18.94■□□□□ 0.62
TDP2-202ENST00000378198 STILQ15468 1287 aa18.94■□□□□ 0.62
TDP2-202ENST00000378198 CTC1Q2NKJ3 1217 aa18.94■□□□□ 0.62
TDP2-202ENST00000378198 C15orf59Q2T9L4 293 aaPredicted RBP18.94■□□□□ 0.62
TDP2-202ENST00000378198 ZNF484Q5JVG2 852 aa18.94■□□□□ 0.62
TDP2-202ENST00000378198 MAP1SQ66K74 1059 aaPredicted RBP18.94■□□□□ 0.62
TDP2-202ENST00000378198 TRNP1Q6NT89 227 aa18.94■□□□□ 0.62
TDP2-202ENST00000378198 SLC26A11Q86WA9 606 aa18.94■□□□□ 0.62
TDP2-202ENST00000378198 USP6NLQ92738 828 aa18.94■□□□□ 0.62
TDP2-202ENST00000378198 PDZD7Q9H5P4 517 aa18.94■□□□□ 0.62
TDP2-202ENST00000378198 DCTN4Q9UJW0 460 aa18.94■□□□□ 0.62
TDP2-202ENST00000378198 MTO1Q9Y2Z2 717 aaKnown RBP18.94■□□□□ 0.62
TDP2-202ENST00000378198 E5RJQ4 531 aa18.93■□□□□ 0.62
TDP2-202ENST00000378198 DPYSL4O14531 572 aa18.93■□□□□ 0.62
TDP2-202ENST00000378198 FAM155BO75949 473 aa18.93■□□□□ 0.62
TDP2-202ENST00000378198 TXNP10599 105 aaKnown RBP18.93■□□□□ 0.62
TDP2-202ENST00000378198 ARFIP2P53365 341 aa18.93■□□□□ 0.62
TDP2-202ENST00000378198 OVGP1Q12889 678 aa18.93■□□□□ 0.62
TDP2-202ENST00000378198 TMEM132DQ14C87 1099 aa18.93■□□□□ 0.62
TDP2-202ENST00000378198 PRKD1Q15139 912 aaPredicted RBP18.93■□□□□ 0.62
TDP2-202ENST00000378198 SLC10A6Q3KNW5 377 aa18.93■□□□□ 0.62
TDP2-202ENST00000378198 TTC39BQ5VTQ0 682 aaPredicted RBP18.93■□□□□ 0.62
TDP2-202ENST00000378198 DPH6Q7L8W6 267 aa18.93■□□□□ 0.62
TDP2-202ENST00000378198 LRRC6Q86X45 466 aa18.93■□□□□ 0.62
TDP2-202ENST00000378198 FBXO16Q8IX29 292 aaPredicted RBP18.93■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms