RNA–Protein interactions for RNA: ENST00000377047.8

GPC6-201, Transcript of glypican 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPC6, Length 6,467 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC6-201ENST00000377047 AIM2O14862 343 aa14.1□□□□□ -0.15
GPC6-201ENST00000377047 TMED1Q13445 227 aa14.1□□□□□ -0.15
GPC6-201ENST00000377047 APOBEC3HQ6NTF7 200 aaKnown RBP14.1□□□□□ -0.15
GPC6-201ENST00000377047 ZFPM1Q8IX07 1006 aa14.1□□□□□ -0.15
GPC6-201ENST00000377047 VPS37AQ8NEZ2 397 aa14.1□□□□□ -0.15
GPC6-201ENST00000377047 ATG4AQ8WYN0 398 aa14.1□□□□□ -0.15
GPC6-201ENST00000377047 PDGFDQ9GZP0 370 aaPredicted RBP14.1□□□□□ -0.15
GPC6-201ENST00000377047 PNMA8BQ9ULN7 279 aaPredicted RBP14.1□□□□□ -0.15
GPC6-201ENST00000377047 FER1L4A9Z1Z3 1794 aa14.1□□□□□ -0.15
GPC6-201ENST00000377047 AKAP10O43572 662 aa14.1□□□□□ -0.15
GPC6-201ENST00000377047 VPS26AO75436 327 aa14.1□□□□□ -0.15
GPC6-201ENST00000377047 DGKIO75912 1065 aa14.1□□□□□ -0.15
GPC6-201ENST00000377047 IGFBP4P22692 258 aa14.1□□□□□ -0.15
GPC6-201ENST00000377047 CAPZA2P47755 286 aa14.1□□□□□ -0.15
GPC6-201ENST00000377047 EMC1Q8N766 993 aa14.1□□□□□ -0.15
GPC6-201ENST00000377047 ZNF555Q8NEP9 628 aa14.1□□□□□ -0.15
GPC6-201ENST00000377047 SMPD4Q9NXE4 827 aa14.1□□□□□ -0.15
GPC6-201ENST00000377047 CACNA2D2Q9NY47 1150 aa14.1□□□□□ -0.15
GPC6-201ENST00000377047 DMTNQ08495 405 aa14.09□□□□□ -0.15
GPC6-201ENST00000377047 AGAP9Q5VTM2 703 aa14.09□□□□□ -0.15
GPC6-201ENST00000377047 EFL1Q7Z2Z2 1120 aaKnown RBP14.09□□□□□ -0.15
GPC6-201ENST00000377047 STX19Q8N4C7 294 aa14.09□□□□□ -0.15
GPC6-201ENST00000377047 RXFP2Q8WXD0 754 aa14.09□□□□□ -0.15
GPC6-201ENST00000377047 WNK4Q96J92 1243 aa14.09□□□□□ -0.15
GPC6-201ENST00000377047 COPS7BQ9H9Q2 264 aaPredicted RBP14.09□□□□□ -0.15
GPC6-201ENST00000377047 ZCCHC17Q9NP64 241 aaKnown RBP14.09□□□□□ -0.15
GPC6-201ENST00000377047 KRT16P08779 473 aa14.09□□□□□ -0.15
GPC6-201ENST00000377047 MDH1P40925 334 aaKnown RBP14.09□□□□□ -0.15
GPC6-201ENST00000377047 RFX3P48380 749 aa14.09□□□□□ -0.15
GPC6-201ENST00000377047 PPM1LQ5SGD2 360 aa14.09□□□□□ -0.15
GPC6-201ENST00000377047 JADE3Q92613 823 aa14.09□□□□□ -0.15
GPC6-201ENST00000377047 MRPL9Q9BYD2 267 aaKnown RBP14.09□□□□□ -0.15
GPC6-201ENST00000377047 SHCBP1LQ9BZQ2 653 aa14.09□□□□□ -0.15
GPC6-201ENST00000377047 ADNPQ9H2P0 1102 aa14.09□□□□□ -0.15
GPC6-201ENST00000377047 IARS2Q9NSE4 1012 aaKnown RBP14.09□□□□□ -0.15
GPC6-201ENST00000377047 SNCAIPQ9Y6H5 919 aa14.09□□□□□ -0.15
GPC6-201ENST00000377047 TMEM150BA6NC51 233 aa14.09□□□□□ -0.15
GPC6-201ENST00000377047 SPTLC1O15269 473 aa14.09□□□□□ -0.15
GPC6-201ENST00000377047 ITGALP20701 1170 aa14.09□□□□□ -0.15
GPC6-201ENST00000377047 NDST1P52848 882 aa14.09□□□□□ -0.15
GPC6-201ENST00000377047 PPIL2Q13356 520 aa14.09□□□□□ -0.15
GPC6-201ENST00000377047 STARD3Q14849 445 aa14.09□□□□□ -0.15
GPC6-201ENST00000377047 APOL2Q9BQE5 337 aa14.09□□□□□ -0.15
GPC6-201ENST00000377047 CLPBQ9H078 707 aa14.09□□□□□ -0.15
GPC6-201ENST00000377047 FBXL21Q9UKT6 434 aa14.09□□□□□ -0.15
GPC6-201ENST00000377047 SERPINB4P48594 390 aa14.09□□□□□ -0.15
GPC6-201ENST00000377047 C16orf89Q6UX73 402 aa14.09□□□□□ -0.15
GPC6-201ENST00000377047 ADGRE3Q9BY15 652 aa14.09□□□□□ -0.15
GPC6-201ENST00000377047 FRMD8P1Q9BZ68 369 aaPredicted RBP14.09□□□□□ -0.15
GPC6-201ENST00000377047 FBXO44Q9H4M3 255 aa14.09□□□□□ -0.15
GPC6-201ENST00000377047 SPACA6W5XKT8 324 aa14.09□□□□□ -0.15
GPC6-201ENST00000377047 TRIM16O95361 564 aa14.09□□□□□ -0.15
GPC6-201ENST00000377047 TCN1P20061 433 aaPredicted RBP14.09□□□□□ -0.15
GPC6-201ENST00000377047 HNRNPH2P55795 449 aaKnown RBP14.09□□□□□ -0.15
GPC6-201ENST00000377047 CCDC85BQ15834 202 aaPredicted RBP14.09□□□□□ -0.15
GPC6-201ENST00000377047 CNPY3Q9BT09 278 aa14.09□□□□□ -0.15
GPC6-201ENST00000377047 MAN1C1Q9NR34 630 aa14.09□□□□□ -0.15
GPC6-201ENST00000377047 A0A087X0T9 212 aa14.09□□□□□ -0.15
GPC6-201ENST00000377047 TRIM49D1C9J1S8 452 aa14.09□□□□□ -0.15
GPC6-201ENST00000377047 FAM228BP0C875 321 aa14.09□□□□□ -0.15
GPC6-201ENST00000377047 PTPRAP18433 802 aa14.09□□□□□ -0.15
GPC6-201ENST00000377047 OTUD4Q01804 1114 aaKnown RBP14.09□□□□□ -0.15
GPC6-201ENST00000377047 ADIGQ0VDE8 80 aa14.09□□□□□ -0.15
GPC6-201ENST00000377047 IQSEC1Q6DN90 963 aa14.09□□□□□ -0.15
GPC6-201ENST00000377047 C11orf74Q86VG3 221 aa14.09□□□□□ -0.15
GPC6-201ENST00000377047 MYO1HQ8N1T3 1032 aa14.09□□□□□ -0.15
GPC6-201ENST00000377047 ARMC2Q8NEN0 867 aa14.09□□□□□ -0.15
GPC6-201ENST00000377047 PLEKHA8Q96JA3 519 aa14.09□□□□□ -0.15
GPC6-201ENST00000377047 FRMD8Q9BZ67 464 aaPredicted RBP14.09□□□□□ -0.15
GPC6-201ENST00000377047 BARX2Q9UMQ3 279 aaPredicted RBP14.09□□□□□ -0.15
GPC6-201ENST00000377047 RUVBL2Q9Y230 463 aaKnown RBP14.09□□□□□ -0.15
GPC6-201ENST00000377047 FAM86B1E9PN63 330 aa14.08□□□□□ -0.15
GPC6-201ENST00000377047 CRTAMO95727 393 aa14.08□□□□□ -0.15
GPC6-201ENST00000377047 FAM86B2P0C5J1 330 aa14.08□□□□□ -0.15
GPC6-201ENST00000377047 SCNN1BP51168 640 aa14.08□□□□□ -0.15
GPC6-201ENST00000377047 RAD23BP54727 409 aa14.08□□□□□ -0.15
GPC6-201ENST00000377047 LAYNQ6UX15 382 aa14.08□□□□□ -0.15
GPC6-201ENST00000377047 CCNI2Q6ZMN8 369 aaPredicted RBP14.08□□□□□ -0.15
GPC6-201ENST00000377047 HORMAD1Q86X24 394 aa14.08□□□□□ -0.15
GPC6-201ENST00000377047 CLEC4FQ8N1N0 589 aa14.08□□□□□ -0.15
GPC6-201ENST00000377047 SGSM3Q96HU1 749 aa14.08□□□□□ -0.15
GPC6-201ENST00000377047 TSEN34Q9BSV6 310 aaKnown RBP14.08□□□□□ -0.15
GPC6-201ENST00000377047 KIF20BQ96Q89 1820 aa14.08□□□□□ -0.16
GPC6-201ENST00000377047 CCR1P32246 355 aa14.08□□□□□ -0.16
GPC6-201ENST00000377047 TBX4P57082 545 aa14.08□□□□□ -0.16
GPC6-201ENST00000377047 CEP70Q8NHQ1 597 aa14.08□□□□□ -0.16
GPC6-201ENST00000377047 ELMO3Q96BJ8 720 aa14.08□□□□□ -0.16
GPC6-201ENST00000377047 MAGEB10Q96LZ2 347 aaPredicted RBP14.08□□□□□ -0.16
GPC6-201ENST00000377047 KBTBD4Q9NVX7 518 aa14.08□□□□□ -0.16
GPC6-201ENST00000377047 ADCY3O60266 1144 aa14.08□□□□□ -0.16
GPC6-201ENST00000377047 JCHAINP01591 159 aa14.08□□□□□ -0.16
GPC6-201ENST00000377047 FKBP1AP62942 108 aaKnown RBP14.08□□□□□ -0.16
GPC6-201ENST00000377047 MAP3K10Q02779 954 aa14.08□□□□□ -0.16
GPC6-201ENST00000377047 EIF2B5Q13144 721 aaKnown RBP14.08□□□□□ -0.16
GPC6-201ENST00000377047 TFAP2DQ7Z6R9 452 aa14.08□□□□□ -0.16
GPC6-201ENST00000377047 ZNF410Q86VK4 478 aa14.08□□□□□ -0.16
GPC6-201ENST00000377047 SLC20A1Q8WUM9 679 aa14.08□□□□□ -0.16
GPC6-201ENST00000377047 BTN2A2Q8WVV5 523 aa14.08□□□□□ -0.16
GPC6-201ENST00000377047 E2F7Q96AV8 911 aa14.08□□□□□ -0.16
GPC6-201ENST00000377047 ZFP42Q96MM3 310 aa14.08□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms