RNA–Protein interactions for RNA: ENST00000376061.8

PDPN-203, Transcript of podoplanin, humanhuman

TSL 1 (best) BASIC

Gene PDPN, Length 1,368 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-203ENST00000376061 DNAJB2P25686 324 aa10.98□□□□□ -0.65
PDPN-203ENST00000376061 OR1D2P34982 312 aa10.98□□□□□ -0.65
PDPN-203ENST00000376061 FLT3P36888 993 aa10.98□□□□□ -0.65
PDPN-203ENST00000376061 MARCKSL1P49006 195 aa10.98□□□□□ -0.65
PDPN-203ENST00000376061 GPR15P49685 360 aa10.98□□□□□ -0.65
PDPN-203ENST00000376061 NDUFV1P49821 464 aa10.98□□□□□ -0.65
PDPN-203ENST00000376061 DNA2P51530 1060 aa10.98□□□□□ -0.65
PDPN-203ENST00000376061 DAOAP59103 153 aa10.98□□□□□ -0.65
PDPN-203ENST00000376061 KRT17Q04695 432 aa10.98□□□□□ -0.65
PDPN-203ENST00000376061 SMARCB1Q12824 385 aa10.98□□□□□ -0.65
PDPN-203ENST00000376061 RPS6KA1Q15418 735 aa10.98□□□□□ -0.65
PDPN-203ENST00000376061 DAB2IPQ5VWQ8 1189 aa10.98□□□□□ -0.65
PDPN-203ENST00000376061 BHLHA9Q7RTU4 235 aa10.98□□□□□ -0.65
PDPN-203ENST00000376061 SCN4BQ8IWT1 228 aa10.98□□□□□ -0.65
PDPN-203ENST00000376061 GPR65Q8IYL9 337 aa10.98□□□□□ -0.65
PDPN-203ENST00000376061 NIPA2Q8N8Q9 360 aa10.98□□□□□ -0.65
PDPN-203ENST00000376061 GADD45GIP1Q8TAE8 222 aaPredicted RBP10.98□□□□□ -0.65
PDPN-203ENST00000376061 SPPL2BQ8TCT7 592 aa10.98□□□□□ -0.65
PDPN-203ENST00000376061 AUTS2Q8WXX7 1259 aa10.98□□□□□ -0.65
PDPN-203ENST00000376061 NDRG1Q92597 394 aaKnown RBP10.98□□□□□ -0.65
PDPN-203ENST00000376061 KRT35Q92764 455 aa10.98□□□□□ -0.65
PDPN-203ENST00000376061 C8orf48Q96LL4 319 aa10.98□□□□□ -0.65
PDPN-203ENST00000376061 PSMB7Q99436 277 aa10.98□□□□□ -0.65
PDPN-203ENST00000376061 CLSTN3Q9BQT9 956 aa10.98□□□□□ -0.65
PDPN-203ENST00000376061 L2HGDHQ9H9P8 463 aa10.98□□□□□ -0.65
PDPN-203ENST00000376061 CNGB3Q9NQW8 809 aa10.98□□□□□ -0.65
PDPN-203ENST00000376061 STK39Q9UEW8 545 aa10.98□□□□□ -0.65
PDPN-203ENST00000376061 LCMT1Q9UIC8 334 aa10.98□□□□□ -0.65
PDPN-203ENST00000376061 MRFAP1Q9Y605 127 aa10.98□□□□□ -0.65
PDPN-203ENST00000376061 RANBP2P49792 3224 aaKnown RBP10.98□□□□□ -0.65
PDPN-203ENST00000376061 MIF4GDA9UHW6 222 aaKnown RBP10.97□□□□□ -0.65
PDPN-203ENST00000376061 DPYSL4O14531 572 aa10.97□□□□□ -0.65
PDPN-203ENST00000376061 TNFRSF10BO14763 440 aa10.97□□□□□ -0.65
PDPN-203ENST00000376061 TRIM66O15016 1216 aa10.97□□□□□ -0.65
PDPN-203ENST00000376061 LILRB3O75022 631 aa10.97□□□□□ -0.65
PDPN-203ENST00000376061 HSF2BPO75031 334 aa10.97□□□□□ -0.65
PDPN-203ENST00000376061 DAB1O75553 588 aa10.97□□□□□ -0.65
PDPN-203ENST00000376061 SOAT2O75908 522 aa10.97□□□□□ -0.65
PDPN-203ENST00000376061 FBXO21O94952 628 aa10.97□□□□□ -0.65
PDPN-203ENST00000376061 CTSAP10619 480 aa10.97□□□□□ -0.65
PDPN-203ENST00000376061 HAPLN1P10915 354 aaPredicted RBP10.97□□□□□ -0.65
PDPN-203ENST00000376061 CHRM1P11229 460 aaPredicted RBP10.97□□□□□ -0.65
PDPN-203ENST00000376061 TCP1P17987 556 aaKnown RBP10.97□□□□□ -0.65
PDPN-203ENST00000376061 GPD1P21695 349 aa10.97□□□□□ -0.65
PDPN-203ENST00000376061 PSMA2P25787 234 aa10.97□□□□□ -0.65
PDPN-203ENST00000376061 CXCR5P32302 372 aa10.97□□□□□ -0.65
PDPN-203ENST00000376061 CTNNA1P35221 906 aaKnown RBP10.97□□□□□ -0.65
PDPN-203ENST00000376061 BMPR1AP36894 532 aa10.97□□□□□ -0.65
PDPN-203ENST00000376061 GRIK1P39086 918 aa10.97□□□□□ -0.65
PDPN-203ENST00000376061 SLC1A1P43005 524 aa10.97□□□□□ -0.65
PDPN-203ENST00000376061 PSEN1P49768 467 aa10.97□□□□□ -0.65
PDPN-203ENST00000376061 ZNF143P52747 638 aaPredicted RBP10.97□□□□□ -0.65
PDPN-203ENST00000376061 SLC5A3P53794 718 aa10.97□□□□□ -0.65
PDPN-203ENST00000376061 RNASE9P60153 205 aaKnown RBP10.97□□□□□ -0.65
PDPN-203ENST00000376061 MRPS5P82675 430 aaKnown RBP10.97□□□□□ -0.65
PDPN-203ENST00000376061 ARCQ7LC44 396 aa10.97□□□□□ -0.65
PDPN-203ENST00000376061 SPRED2Q7Z698 418 aa10.97□□□□□ -0.65
PDPN-203ENST00000376061 HS6ST3Q8IZP7 471 aa10.97□□□□□ -0.65
PDPN-203ENST00000376061 SCML4Q8N228 414 aa10.97□□□□□ -0.65
PDPN-203ENST00000376061 COG1Q8WTW3 980 aa10.97□□□□□ -0.65
PDPN-203ENST00000376061 RXFP2Q8WXD0 754 aa10.97□□□□□ -0.65
PDPN-203ENST00000376061 ALG3Q92685 438 aa10.97□□□□□ -0.65
PDPN-203ENST00000376061 OSBPL9Q96SU4 736 aa10.97□□□□□ -0.65
PDPN-203ENST00000376061 SEPT5Q99719 369 aaPredicted RBP10.97□□□□□ -0.65
PDPN-203ENST00000376061 C17orf80Q9BSJ5 609 aa10.97□□□□□ -0.65
PDPN-203ENST00000376061 PLVAPQ9BX97 442 aa10.97□□□□□ -0.65
PDPN-203ENST00000376061 MRPL17Q9NRX2 175 aaKnown RBP10.97□□□□□ -0.65
PDPN-203ENST00000376061 ASNSD1Q9NWL6 643 aa10.97□□□□□ -0.65
PDPN-203ENST00000376061 CDC23Q9UJX2 597 aa10.97□□□□□ -0.65
PDPN-203ENST00000376061 RWDD3Q9Y3V2 267 aa10.97□□□□□ -0.65
PDPN-203ENST00000376061 SAR1BQ9Y6B6 198 aa10.97□□□□□ -0.65
PDPN-203ENST00000376061 TNRC18O15417 2968 aaPredicted RBP10.97□□□□□ -0.65
PDPN-203ENST00000376061 YJEFN3A6XGL0 299 aa10.96□□□□□ -0.65
PDPN-203ENST00000376061 E7ENQ6 273 aa10.96□□□□□ -0.65
PDPN-203ENST00000376061 C5orf67F2Z3F1 127 aa10.96□□□□□ -0.65
PDPN-203ENST00000376061 KCNK3O14649 394 aa10.96□□□□□ -0.65
PDPN-203ENST00000376061 ZNF185O15231 689 aa10.96□□□□□ -0.65
PDPN-203ENST00000376061 SART1O43290 800 aaKnown RBP10.96□□□□□ -0.65
PDPN-203ENST00000376061 SRGAP2O75044 1071 aa10.96□□□□□ -0.65
PDPN-203ENST00000376061 ZBED1O96006 694 aa10.96□□□□□ -0.65
PDPN-203ENST00000376061 CA3P07451 260 aa10.96□□□□□ -0.65
PDPN-203ENST00000376061 USP17L7P0C7H9 530 aa10.96□□□□□ -0.65
PDPN-203ENST00000376061 TCF4P15884 667 aa10.96□□□□□ -0.65
PDPN-203ENST00000376061 PDGFRAP16234 1089 aa10.96□□□□□ -0.65
PDPN-203ENST00000376061 PRLRP16471 622 aa10.96□□□□□ -0.65
PDPN-203ENST00000376061 CTNNA2P26232 953 aa10.96□□□□□ -0.65
PDPN-203ENST00000376061 TAS2R40P59535 323 aa10.96□□□□□ -0.65
PDPN-203ENST00000376061 CREMQ03060 361 aa10.96□□□□□ -0.65
PDPN-203ENST00000376061 DUSP4Q13115 394 aa10.96□□□□□ -0.65
PDPN-203ENST00000376061 RAB33AQ14088 237 aa10.96□□□□□ -0.65
PDPN-203ENST00000376061 PIGHQ14442 188 aaPredicted RBP10.96□□□□□ -0.65
PDPN-203ENST00000376061 DDR2Q16832 855 aa10.96□□□□□ -0.65
PDPN-203ENST00000376061 MGAT5BQ3V5L5 792 aa10.96□□□□□ -0.65
PDPN-203ENST00000376061 EFHC1Q5JVL4 640 aa10.96□□□□□ -0.65
PDPN-203ENST00000376061 DCAF12L1Q5VU92 463 aa10.96□□□□□ -0.65
PDPN-203ENST00000376061 SDHAF4Q5VUM1 108 aa10.96□□□□□ -0.65
PDPN-203ENST00000376061 HFE2Q6ZVN8 426 aa10.96□□□□□ -0.65
PDPN-203ENST00000376061 STKLD1Q8NE28 680 aa10.96□□□□□ -0.65
PDPN-203ENST00000376061 SCAMP5Q8TAC9 235 aa10.96□□□□□ -0.65
PDPN-203ENST00000376061 IRGQQ8WZA9 623 aa10.96□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms