RNA–Protein interactions for RNA: ENST00000375850.3

C9orf47-202, Transcript of chromosome 9 open reading frame 47, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene C9orf47, Length 859 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf47-202ENST00000375850 TPSD1Q9BZJ3 242 aa24.64■■□□□ 1.54
C9orf47-202ENST00000375850 DMAP1Q9NPF5 467 aaPredicted RBP24.64■■□□□ 1.54
C9orf47-202ENST00000375850 ARHGEF4Q9NR80 690 aa24.64■■□□□ 1.54
C9orf47-202ENST00000375850 FOXD4L1Q9NU39 408 aa24.64■■□□□ 1.54
C9orf47-202ENST00000375850 IL37Q9NZH6 218 aa24.64■■□□□ 1.54
C9orf47-202ENST00000375850 CNOT1A5YKK6 2376 aaKnown RBP24.64■■□□□ 1.53
C9orf47-202ENST00000375850 KMT2BQ9UMN6 2715 aaPredicted RBP24.63■■□□□ 1.53
C9orf47-202ENST00000375850 HELZP42694 1942 aaKnown RBP24.63■■□□□ 1.53
C9orf47-202ENST00000375850 KRT37O76014 449 aa24.63■■□□□ 1.53
C9orf47-202ENST00000375850 CACNA2D1P54289 1103 aa24.63■■□□□ 1.53
C9orf47-202ENST00000375850 CLDN10P78369 228 aa24.63■■□□□ 1.53
C9orf47-202ENST00000375850 BIRC3Q13489 604 aa24.63■■□□□ 1.53
C9orf47-202ENST00000375850 ZNF699Q32M78 642 aa24.63■■□□□ 1.53
C9orf47-202ENST00000375850 SPDYCQ5MJ68 293 aa24.63■■□□□ 1.53
C9orf47-202ENST00000375850 BTBD8Q5XKL5 378 aa24.63■■□□□ 1.53
C9orf47-202ENST00000375850 TCEAL6Q6IPX3 200 aa24.63■■□□□ 1.53
C9orf47-202ENST00000375850 TRMT11Q7Z4G4 463 aaKnown RBP24.63■■□□□ 1.53
C9orf47-202ENST00000375850 CCDC33Q8N5R6 958 aa24.63■■□□□ 1.53
C9orf47-202ENST00000375850 IL17RCQ8NAC3 791 aa24.63■■□□□ 1.53
C9orf47-202ENST00000375850 OLIG1Q8TAK6 271 aa24.63■■□□□ 1.53
C9orf47-202ENST00000375850 TCEAL3Q969E4 200 aa24.63■■□□□ 1.53
C9orf47-202ENST00000375850 GZF1Q9H116 711 aaPredicted RBP24.63■■□□□ 1.53
C9orf47-202ENST00000375850 TMEM30AQ9NV96 361 aa24.63■■□□□ 1.53
C9orf47-202ENST00000375850 PTPRDP23468 1912 aa24.63■■□□□ 1.53
C9orf47-202ENST00000375850 LNP1A1A4G5 178 aa24.62■■□□□ 1.53
C9orf47-202ENST00000375850 TRIM21P19474 475 aaKnown RBP24.62■■□□□ 1.53
C9orf47-202ENST00000375850 IFRD2Q12894 506 aaPredicted RBP24.62■■□□□ 1.53
C9orf47-202ENST00000375850 FAM35AQ86V20 835 aa24.62■■□□□ 1.53
C9orf47-202ENST00000375850 TXNDC5Q8NBS9 432 aaKnown RBP24.62■■□□□ 1.53
C9orf47-202ENST00000375850 SLC39A2Q9NP94 309 aa24.62■■□□□ 1.53
C9orf47-202ENST00000375850 SH3BP1Q9Y3L3 701 aa24.62■■□□□ 1.53
C9orf47-202ENST00000375850 EML5Q05BV3 1969 aa24.62■■□□□ 1.53
C9orf47-202ENST00000375850 ATG2BQ96BY7 2078 aa24.62■■□□□ 1.53
C9orf47-202ENST00000375850 FAM92AA1XBS5 289 aa24.61■■□□□ 1.53
C9orf47-202ENST00000375850 C4orf47A7E2U8 309 aa24.61■■□□□ 1.53
C9orf47-202ENST00000375850 CLDN5O00501 218 aa24.61■■□□□ 1.53
C9orf47-202ENST00000375850 COCHO43405 550 aa24.61■■□□□ 1.53
C9orf47-202ENST00000375850 NCOA4Q13772 614 aa24.61■■□□□ 1.53
C9orf47-202ENST00000375850 LPCAT2Q7L5N7 544 aa24.61■■□□□ 1.53
C9orf47-202ENST00000375850 SLC9A9Q8IVB4 645 aa24.61■■□□□ 1.53
C9orf47-202ENST00000375850 ALLCQ8N6M5 410 aa24.61■■□□□ 1.53
C9orf47-202ENST00000375850 PARD3BQ8TEW8 1205 aa24.61■■□□□ 1.53
C9orf47-202ENST00000375850 MED10Q9BTT4 135 aa24.61■■□□□ 1.53
C9orf47-202ENST00000375850 TMEM9BQ9NQ34 198 aa24.61■■□□□ 1.53
C9orf47-202ENST00000375850 EVLQ9UI08 416 aaPredicted RBP24.61■■□□□ 1.53
C9orf47-202ENST00000375850 KIAA1549LQ6ZVL6 1849 aa24.61■■□□□ 1.53
C9orf47-202ENST00000375850 TNFRSF10BO14763 440 aa24.6■■□□□ 1.53
C9orf47-202ENST00000375850 HOXC11O43248 304 aaPredicted RBP24.6■■□□□ 1.53
C9orf47-202ENST00000375850 CLSTN1O94985 981 aa24.6■■□□□ 1.53
C9orf47-202ENST00000375850 KLF8O95600 359 aaPredicted RBP24.6■■□□□ 1.53
C9orf47-202ENST00000375850 RPN1P04843 607 aaKnown RBP24.6■■□□□ 1.53
C9orf47-202ENST00000375850 ZDHHC11BP0C7U3 371 aa24.6■■□□□ 1.53
C9orf47-202ENST00000375850 P2RY2P41231 377 aa24.6■■□□□ 1.53
C9orf47-202ENST00000375850 KIR2DL1P43626 348 aaPredicted RBP24.6■■□□□ 1.53
C9orf47-202ENST00000375850 SLC6A11P48066 632 aa24.6■■□□□ 1.53
C9orf47-202ENST00000375850 SLC5A3P53794 718 aa24.6■■□□□ 1.53
C9orf47-202ENST00000375850 LMAN2Q12907 356 aa24.6■■□□□ 1.53
C9orf47-202ENST00000375850 LY6G5CQ5SRR4 150 aa24.6■■□□□ 1.53
C9orf47-202ENST00000375850 TMEM92Q6UXU6 159 aa24.6■■□□□ 1.53
C9orf47-202ENST00000375850 CEP57L1Q8IYX8 460 aa24.6■■□□□ 1.53
C9orf47-202ENST00000375850 TAF4BQ92750 862 aa24.6■■□□□ 1.53
C9orf47-202ENST00000375850 ZFRQ96KR1 1074 aaKnown RBP24.6■■□□□ 1.53
C9orf47-202ENST00000375850 KCNK16Q96T55 309 aa24.6■■□□□ 1.53
C9orf47-202ENST00000375850 BLZF1Q9H2G9 400 aa24.6■■□□□ 1.53
C9orf47-202ENST00000375850 FBXO44Q9H4M3 255 aa24.6■■□□□ 1.53
C9orf47-202ENST00000375850 SMYD3Q9H7B4 428 aa24.6■■□□□ 1.53
C9orf47-202ENST00000375850 INVSQ9Y283 1065 aa24.6■■□□□ 1.53
C9orf47-202ENST00000375850 TIE1P35590 1138 aa24.59■■□□□ 1.53
C9orf47-202ENST00000375850 ME1P48163 572 aa24.59■■□□□ 1.53
C9orf47-202ENST00000375850 DHPSP49366 369 aaPredicted RBP24.59■■□□□ 1.53
C9orf47-202ENST00000375850 NOVA1P51513 510 aaKnown RBP24.59■■□□□ 1.53
C9orf47-202ENST00000375850 SGSM1Q2NKQ1 1148 aa24.59■■□□□ 1.53
C9orf47-202ENST00000375850 RESP18Q5W5W9 173 aa24.59■■□□□ 1.53
C9orf47-202ENST00000375850 PSAPL1Q6NUJ1 521 aa24.59■■□□□ 1.53
C9orf47-202ENST00000375850 NACA2Q9H009 215 aa24.59■■□□□ 1.53
C9orf47-202ENST00000375850 BCCIPQ9P287 314 aaKnown RBP eCLIP24.59■■□□□ 1.53
C9orf47-202ENST00000375850 DEC1Q9P2X7 70 aa24.59■■□□□ 1.53
C9orf47-202ENST00000375850 CHORDC1Q9UHD1 332 aaPredicted RBP24.59■■□□□ 1.53
C9orf47-202ENST00000375850 CFAP45Q9UL16 551 aa24.59■■□□□ 1.53
C9orf47-202ENST00000375850 CHD8Q9HCK8 2581 aa24.58■■□□□ 1.53
C9orf47-202ENST00000375850 LRRIQ3A6PVS8 624 aaPredicted RBP24.58■■□□□ 1.53
C9orf47-202ENST00000375850 SGK1O00141 431 aa24.58■■□□□ 1.53
C9orf47-202ENST00000375850 MAP3K13O43283 966 aa24.58■■□□□ 1.53
C9orf47-202ENST00000375850 C4BPAP04003 597 aaKnown RBP24.58■■□□□ 1.53
C9orf47-202ENST00000375850 CHRM1P11229 460 aaPredicted RBP24.58■■□□□ 1.53
C9orf47-202ENST00000375850 CSRP1P21291 193 aaKnown RBP24.58■■□□□ 1.53
C9orf47-202ENST00000375850 BCKDHBP21953 392 aa24.58■■□□□ 1.53
C9orf47-202ENST00000375850 HOXD12P35452 270 aa24.58■■□□□ 1.53
C9orf47-202ENST00000375850 PAQR9Q6ZVX9 377 aa24.58■■□□□ 1.53
C9orf47-202ENST00000375850 UNC93AQ86WB7 457 aa24.58■■□□□ 1.53
C9orf47-202ENST00000375850 C12orf40Q86WS4 652 aa24.58■■□□□ 1.53
C9orf47-202ENST00000375850 TTC30AQ86WT1 665 aa24.58■■□□□ 1.53
C9orf47-202ENST00000375850 ETFBKMTQ8IXQ9 262 aa24.58■■□□□ 1.53
C9orf47-202ENST00000375850 SNX21Q969T3 373 aa24.58■■□□□ 1.53
C9orf47-202ENST00000375850 SPHK2Q9NRA0 654 aa24.58■■□□□ 1.53
C9orf47-202ENST00000375850 KRT82Q9NSB4 513 aa24.58■■□□□ 1.53
C9orf47-202ENST00000375850 DMAC2Q9NW81 257 aa24.58■■□□□ 1.53
C9orf47-202ENST00000375850 TBC1D3BA6NDS4 549 aa24.57■■□□□ 1.52
C9orf47-202ENST00000375850 AP1G2O75843 785 aa24.57■■□□□ 1.52
C9orf47-202ENST00000375850 SLFN14P0C7P3 912 aa24.57■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms