RNA–Protein interactions for RNA: ENST00000375740.7

MSH5-202, Transcript of mutS homolog 5, humanhuman

TSL 1 (best) BASIC

Gene MSH5, Length 2,669 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-202ENST00000375740 IFNB1P01574 187 aa14.61□□□□□ -0.07
MSH5-202ENST00000375740 CTCFP49711 727 aaPredicted RBP14.61□□□□□ -0.07
MSH5-202ENST00000375740 FKBP1BP68106 108 aa14.61□□□□□ -0.07
MSH5-202ENST00000375740 BNIP1Q12981 228 aa14.61□□□□□ -0.07
MSH5-202ENST00000375740 TAZQ16635 292 aa14.61□□□□□ -0.07
MSH5-202ENST00000375740 SLC27A1Q6PCB7 646 aa14.61□□□□□ -0.07
MSH5-202ENST00000375740 BBS12Q6ZW61 710 aa14.61□□□□□ -0.07
MSH5-202ENST00000375740 TTC39CQ8N584 583 aa14.61□□□□□ -0.07
MSH5-202ENST00000375740 C2orf69Q8N8R5 385 aa14.61□□□□□ -0.07
MSH5-202ENST00000375740 SAYSD1Q9NPB0 183 aa14.61□□□□□ -0.07
MSH5-202ENST00000375740 ASNSD1Q9NWL6 643 aa14.61□□□□□ -0.07
MSH5-202ENST00000375740 CPA4Q9UI42 421 aa14.61□□□□□ -0.07
MSH5-202ENST00000375740 USP18Q9UMW8 372 aa14.61□□□□□ -0.07
MSH5-202ENST00000375740 SCN1AP35498 2009 aa14.61□□□□□ -0.07
MSH5-202ENST00000375740 A6NJR5 290 aa14.61□□□□□ -0.07
MSH5-202ENST00000375740 E5RJQ4 531 aa14.61□□□□□ -0.07
MSH5-202ENST00000375740 TCEA3O75764 348 aa14.61□□□□□ -0.07
MSH5-202ENST00000375740 RGS7P49802 495 aa14.61□□□□□ -0.07
MSH5-202ENST00000375740 ZNF143P52747 638 aaPredicted RBP14.61□□□□□ -0.07
MSH5-202ENST00000375740 ACAP1Q15027 740 aa14.61□□□□□ -0.07
MSH5-202ENST00000375740 GOLGA7BQ2TAP0 167 aa14.61□□□□□ -0.07
MSH5-202ENST00000375740 RAB6CQ53S08 254 aa14.61□□□□□ -0.07
MSH5-202ENST00000375740 PPP1R26Q5T8A7 1209 aaPredicted RBP14.61□□□□□ -0.07
MSH5-202ENST00000375740 CYP4F22Q6NT55 531 aa14.61□□□□□ -0.07
MSH5-202ENST00000375740 TRNP1Q6NT89 227 aa14.61□□□□□ -0.07
MSH5-202ENST00000375740 FAM183BPQ6ZVS7 135 aa14.61□□□□□ -0.07
MSH5-202ENST00000375740 ACOT1Q86TX2 421 aa14.61□□□□□ -0.07
MSH5-202ENST00000375740 RXFP2Q8WXD0 754 aa14.61□□□□□ -0.07
MSH5-202ENST00000375740 C18orf25Q96B23 403 aaPredicted RBP14.61□□□□□ -0.07
MSH5-202ENST00000375740 RAB6CQ9H0N0 254 aa14.61□□□□□ -0.07
MSH5-202ENST00000375740 ARHGEF3Q9NR81 526 aa14.61□□□□□ -0.07
MSH5-202ENST00000375740 TUBGCP4Q9UGJ1 667 aa14.61□□□□□ -0.07
MSH5-202ENST00000375740 GRAP2O75791 330 aa14.6□□□□□ -0.07
MSH5-202ENST00000375740 CELF2O95319 508 aaKnown RBP14.6□□□□□ -0.07
MSH5-202ENST00000375740 CYP2C9P11712 490 aa14.6□□□□□ -0.07
MSH5-202ENST00000375740 GPD1P21695 349 aa14.6□□□□□ -0.07
MSH5-202ENST00000375740 RPS6KA3P51812 740 aa14.6□□□□□ -0.07
MSH5-202ENST00000375740 ZBTB6Q15916 424 aa14.6□□□□□ -0.07
MSH5-202ENST00000375740 HP1BP3Q5SSJ5 553 aaPredicted RBP14.6□□□□□ -0.07
MSH5-202ENST00000375740 ANO7Q6IWH7 933 aa14.6□□□□□ -0.07
MSH5-202ENST00000375740 RFX6Q8HWS3 928 aa14.6□□□□□ -0.07
MSH5-202ENST00000375740 CYP4X1Q8N118 509 aa14.6□□□□□ -0.07
MSH5-202ENST00000375740 PIWIL1Q96J94 861 aaKnown RBP14.6□□□□□ -0.07
MSH5-202ENST00000375740 SNX27Q96L92 541 aa14.6□□□□□ -0.07
MSH5-202ENST00000375740 DERAQ9Y315 318 aa14.6□□□□□ -0.07
MSH5-202ENST00000375740 NME7Q9Y5B8 376 aa14.6□□□□□ -0.07
MSH5-202ENST00000375740 OAS1P00973 400 aaKnown RBP14.6□□□□□ -0.07
MSH5-202ENST00000375740 GNAT1P11488 350 aa14.6□□□□□ -0.07
MSH5-202ENST00000375740 PDGFRAP16234 1089 aa14.6□□□□□ -0.07
MSH5-202ENST00000375740 YARSP54577 528 aaKnown RBP14.6□□□□□ -0.07
MSH5-202ENST00000375740 HIC1Q14526 733 aa14.6□□□□□ -0.07
MSH5-202ENST00000375740 GLRA4Q5JXX5 417 aa14.6□□□□□ -0.07
MSH5-202ENST00000375740 RNASEH2BQ5TBB1 312 aaKnown RBP14.6□□□□□ -0.07
MSH5-202ENST00000375740 APBB1IPQ7Z5R6 666 aaPredicted RBP14.6□□□□□ -0.07
MSH5-202ENST00000375740 TTC13Q8NBP0 860 aa14.6□□□□□ -0.07
MSH5-202ENST00000375740 LENG1Q96BZ8 264 aaPredicted RBP14.6□□□□□ -0.07
MSH5-202ENST00000375740 PEBP4Q96S96 227 aa14.6□□□□□ -0.07
MSH5-202ENST00000375740 FAM124BQ9H5Z6 455 aaPredicted RBP14.6□□□□□ -0.07
MSH5-202ENST00000375740 PCDH9Q9HC56 1237 aa14.6□□□□□ -0.07
MSH5-202ENST00000375740 GNEQ9Y223 722 aaKnown RBP14.6□□□□□ -0.07
MSH5-202ENST00000375740 NRCAMQ92823 1304 aa14.6□□□□□ -0.07
MSH5-202ENST00000375740 C2CD4BA6NLJ0 364 aa14.59□□□□□ -0.07
MSH5-202ENST00000375740 TCP11X1B4DZS4 312 aa14.59□□□□□ -0.07
MSH5-202ENST00000375740 FESP07332 822 aa14.59□□□□□ -0.07
MSH5-202ENST00000375740 PDHA1P08559 390 aa14.59□□□□□ -0.07
MSH5-202ENST00000375740 GDF10P55107 478 aa14.59□□□□□ -0.07
MSH5-202ENST00000375740 MORF4L2Q15014 288 aa14.59□□□□□ -0.07
MSH5-202ENST00000375740 C15orf59Q2T9L4 293 aaPredicted RBP14.59□□□□□ -0.07
MSH5-202ENST00000375740 PMF1Q6P1K2 205 aa14.59□□□□□ -0.07
MSH5-202ENST00000375740 SLC30A9Q6PML9 568 aa14.59□□□□□ -0.07
MSH5-202ENST00000375740 CEP128Q6ZU80 1094 aa14.59□□□□□ -0.07
MSH5-202ENST00000375740 UTP4Q969X6 686 aaKnown RBP14.59□□□□□ -0.07
MSH5-202ENST00000375740 RMDN2Q96LZ7 410 aa14.59□□□□□ -0.07
MSH5-202ENST00000375740 CCDC77Q9BR77 488 aa14.59□□□□□ -0.07
MSH5-202ENST00000375740 CNPY3Q9BT09 278 aa14.59□□□□□ -0.07
MSH5-202ENST00000375740 APOL6Q9BWW8 343 aa14.59□□□□□ -0.07
MSH5-202ENST00000375740 CALN1Q9BXU9 219 aa14.59□□□□□ -0.07
MSH5-202ENST00000375740 FLRT1Q9NZU1 646 aa14.59□□□□□ -0.07
MSH5-202ENST00000375740 TBK1Q9UHD2 729 aa14.59□□□□□ -0.07
MSH5-202ENST00000375740 NAALADL1Q9UQQ1 740 aa14.59□□□□□ -0.07
MSH5-202ENST00000375740 USP15Q9Y4E8 981 aaPredicted RBP14.59□□□□□ -0.07
MSH5-202ENST00000375740 SMIM35A0A1B0GVV1 85 aa14.59□□□□□ -0.07
MSH5-202ENST00000375740 F2P00734 622 aa14.59□□□□□ -0.07
MSH5-202ENST00000375740 DARSP14868 501 aaKnown RBP14.59□□□□□ -0.07
MSH5-202ENST00000375740 AKAP5P24588 427 aa14.59□□□□□ -0.07
MSH5-202ENST00000375740 ATP5DP30049 168 aa14.59□□□□□ -0.07
MSH5-202ENST00000375740 PCK1P35558 622 aa14.59□□□□□ -0.07
MSH5-202ENST00000375740 CDC42EP1Q00587 391 aa14.59□□□□□ -0.07
MSH5-202ENST00000375740 STAT4Q14765 748 aa14.59□□□□□ -0.07
MSH5-202ENST00000375740 NOTUMQ6P988 496 aa14.59□□□□□ -0.07
MSH5-202ENST00000375740 ANKLE1Q8NAG6 615 aa14.59□□□□□ -0.07
MSH5-202ENST00000375740 DNAJB3Q8WWF6 145 aa14.59□□□□□ -0.07
MSH5-202ENST00000375740 LPIN3Q9BQK8 851 aa14.59□□□□□ -0.07
MSH5-202ENST00000375740 SYT15Q9BQS2 421 aa14.59□□□□□ -0.07
MSH5-202ENST00000375740 FRMD8P1Q9BZ68 369 aaPredicted RBP14.59□□□□□ -0.07
MSH5-202ENST00000375740 NXF3Q9H4D5 531 aaKnown RBP14.59□□□□□ -0.07
MSH5-202ENST00000375740 PAPOLBQ9NRJ5 636 aaKnown RBP14.59□□□□□ -0.07
MSH5-202ENST00000375740 FAM49BQ9NUQ9 324 aa14.59□□□□□ -0.07
MSH5-202ENST00000375740 IRAK4Q9NWZ3 460 aa14.59□□□□□ -0.07
MSH5-202ENST00000375740 DYNC1LI1Q9Y6G9 523 aaKnown RBP14.59□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms