RNA–Protein interactions for RNA: ENST00000375360.7

PTPDC1-202, Transcript of protein tyrosine phosphatase domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPDC1, Length 4,517 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1-202ENST00000375360 XPO6Q96QU8 1125 aaKnown RBP18.65■□□□□ 0.58
PTPDC1-202ENST00000375360 GMLQ99445 158 aa18.65■□□□□ 0.58
PTPDC1-202ENST00000375360 FOXP3Q9BZS1 431 aa18.65■□□□□ 0.58
PTPDC1-202ENST00000375360 GFAPP14136 432 aa18.64■□□□□ 0.58
PTPDC1-202ENST00000375360 CYP2F1P24903 491 aa18.64■□□□□ 0.58
PTPDC1-202ENST00000375360 CALRP27797 417 aaKnown RBP18.64■□□□□ 0.58
PTPDC1-202ENST00000375360 DDX53Q86TM3 631 aaKnown RBP18.64■□□□□ 0.58
PTPDC1-202ENST00000375360 FGFR1OP2Q9NVK5 253 aa18.64■□□□□ 0.58
PTPDC1-202ENST00000375360 DNPEPQ9ULA0 475 aa18.64■□□□□ 0.58
PTPDC1-202ENST00000375360 ST3GAL5Q9UNP4 418 aa18.64■□□□□ 0.58
PTPDC1-202ENST00000375360 CAND2O75155 1236 aa18.64■□□□□ 0.57
PTPDC1-202ENST00000375360 CST3P01034 146 aaPredicted RBP18.64■□□□□ 0.57
PTPDC1-202ENST00000375360 SNRPAP09012 282 aaKnown RBP18.64■□□□□ 0.57
PTPDC1-202ENST00000375360 USP17L7P0C7H9 530 aa18.64■□□□□ 0.57
PTPDC1-202ENST00000375360 GBP7Q8N8V2 638 aaPredicted RBP18.64■□□□□ 0.57
PTPDC1-202ENST00000375360 LENG9Q96B70 501 aa18.64■□□□□ 0.57
PTPDC1-202ENST00000375360 KREMEN1Q96MU8 473 aa18.64■□□□□ 0.57
PTPDC1-202ENST00000375360 GOLGA2P5Q9HBQ8 144 aa18.64■□□□□ 0.57
PTPDC1-202ENST00000375360 DNAJC6O75061 913 aa18.64■□□□□ 0.57
PTPDC1-202ENST00000375360 PAEPP09466 180 aa18.64■□□□□ 0.57
PTPDC1-202ENST00000375360 RARGP13631 454 aa18.64■□□□□ 0.57
PTPDC1-202ENST00000375360 FKBP1BP68106 108 aa18.64■□□□□ 0.57
PTPDC1-202ENST00000375360 NPHS2Q9NP85 383 aa18.64■□□□□ 0.57
PTPDC1-202ENST00000375360 CASZ1Q86V15 1759 aa18.64■□□□□ 0.57
PTPDC1-202ENST00000375360 KRT4P19013 534 aa18.64■□□□□ 0.57
PTPDC1-202ENST00000375360 AXLP30530 894 aa18.64■□□□□ 0.57
PTPDC1-202ENST00000375360 NBPF20Q3BBV1 942 aa18.64■□□□□ 0.57
PTPDC1-202ENST00000375360 SPRYD7Q5W111 196 aa18.64■□□□□ 0.57
PTPDC1-202ENST00000375360 RFX8Q6ZV50 586 aa18.64■□□□□ 0.57
PTPDC1-202ENST00000375360 FAM136AQ96C01 138 aa18.64■□□□□ 0.57
PTPDC1-202ENST00000375360 ULBP1Q9BZM6 244 aa18.64■□□□□ 0.57
PTPDC1-202ENST00000375360 ACTR5Q9H9F9 607 aaPredicted RBP18.64■□□□□ 0.57
PTPDC1-202ENST00000375360 SLC39A10Q9ULF5 831 aa18.64■□□□□ 0.57
PTPDC1-202ENST00000375360 NID2Q14112 1375 aa18.63■□□□□ 0.57
PTPDC1-202ENST00000375360 LRG1P02750 347 aa18.63■□□□□ 0.57
PTPDC1-202ENST00000375360 HMGCRP04035 888 aa18.63■□□□□ 0.57
PTPDC1-202ENST00000375360 NOGQ13253 232 aa18.63■□□□□ 0.57
PTPDC1-202ENST00000375360 ATP6V0D2Q8N8Y2 350 aa18.63■□□□□ 0.57
PTPDC1-202ENST00000375360 FGD4Q96M96 766 aa18.63■□□□□ 0.57
PTPDC1-202ENST00000375360 ARHGEF38Q9NXL2 777 aa18.63■□□□□ 0.57
PTPDC1-202ENST00000375360 H0Y626 953 aa18.63■□□□□ 0.57
PTPDC1-202ENST00000375360 ZSCAN5DPP0CG00 497 aa18.63■□□□□ 0.57
PTPDC1-202ENST00000375360 IL1RL1Q01638 556 aa18.63■□□□□ 0.57
PTPDC1-202ENST00000375360 C3orf20Q8ND61 904 aa18.63■□□□□ 0.57
PTPDC1-202ENST00000375360 BLOC1S5Q8TDH9 187 aa18.63■□□□□ 0.57
PTPDC1-202ENST00000375360 APBA2Q99767 749 aa18.63■□□□□ 0.57
PTPDC1-202ENST00000375360 CPSF2Q9P2I0 782 aaKnown RBP18.63■□□□□ 0.57
PTPDC1-202ENST00000375360 M0R2N6 131 aa18.63■□□□□ 0.57
PTPDC1-202ENST00000375360 RTP1P59025 263 aa18.63■□□□□ 0.57
PTPDC1-202ENST00000375360 DNAJC3Q13217 504 aa18.63■□□□□ 0.57
PTPDC1-202ENST00000375360 LVRNQ6Q4G3 990 aa18.63■□□□□ 0.57
PTPDC1-202ENST00000375360 TASP1Q9H6P5 420 aa18.63■□□□□ 0.57
PTPDC1-202ENST00000375360 XPNPEP1Q9NQW7 623 aa18.63■□□□□ 0.57
PTPDC1-202ENST00000375360 SMG5Q9UPR3 1016 aaKnown RBP18.63■□□□□ 0.57
PTPDC1-202ENST00000375360 SLC30A1Q9Y6M5 507 aa18.63■□□□□ 0.57
PTPDC1-202ENST00000375360 GOLGA8QA0A0J9YX86 632 aa18.62■□□□□ 0.57
PTPDC1-202ENST00000375360 GOLGA8OA6NCC3 632 aa18.62■□□□□ 0.57
PTPDC1-202ENST00000375360 GOLGA8NF8WBI6 632 aa18.62■□□□□ 0.57
PTPDC1-202ENST00000375360 ZNF263O14978 683 aa18.62■□□□□ 0.57
PTPDC1-202ENST00000375360 TREHO43280 583 aa18.62■□□□□ 0.57
PTPDC1-202ENST00000375360 CDH18Q13634 790 aa18.62■□□□□ 0.57
PTPDC1-202ENST00000375360 NAPEPLDQ6IQ20 393 aa18.62■□□□□ 0.57
PTPDC1-202ENST00000375360 AVENQ9NQS1 362 aaPredicted RBP18.62■□□□□ 0.57
PTPDC1-202ENST00000375360 SCAMP3O14828 347 aaKnown RBP18.62■□□□□ 0.57
PTPDC1-202ENST00000375360 EIF3HO15372 352 aaKnown RBP eCLIP18.62■□□□□ 0.57
PTPDC1-202ENST00000375360 NDUFS3O75489 264 aa18.62■□□□□ 0.57
PTPDC1-202ENST00000375360 TGM2P21980 687 aa18.62■□□□□ 0.57
PTPDC1-202ENST00000375360 SLC11A2P49281 568 aa18.62■□□□□ 0.57
PTPDC1-202ENST00000375360 ACAD11Q709F0 780 aa18.62■□□□□ 0.57
PTPDC1-202ENST00000375360 SPATA21Q7Z572 469 aa18.62■□□□□ 0.57
PTPDC1-202ENST00000375360 ELMO2Q96JJ3 720 aa18.62■□□□□ 0.57
PTPDC1-202ENST00000375360 EPN3Q9H201 632 aa18.62■□□□□ 0.57
PTPDC1-202ENST00000375360 TMEM39AQ9NV64 488 aa18.62■□□□□ 0.57
PTPDC1-202ENST00000375360 DSEQ9UL01 958 aa18.62■□□□□ 0.57
PTPDC1-202ENST00000375360 MTSS1O43312 755 aa18.62■□□□□ 0.57
PTPDC1-202ENST00000375360 URODP06132 367 aa18.62■□□□□ 0.57
PTPDC1-202ENST00000375360 RPL21P46778 160 aaKnown RBP18.62■□□□□ 0.57
PTPDC1-202ENST00000375360 MAMLD1Q13495 774 aa18.62■□□□□ 0.57
PTPDC1-202ENST00000375360 ERMARDQ5T6L9 678 aa18.62■□□□□ 0.57
PTPDC1-202ENST00000375360 ROPN1BQ9BZX4 212 aaPredicted RBP18.62■□□□□ 0.57
PTPDC1-202ENST00000375360 DCLK3Q9C098 648 aa18.62■□□□□ 0.57
PTPDC1-202ENST00000375360 HSD3B7Q9H2F3 369 aa18.62■□□□□ 0.57
PTPDC1-202ENST00000375360 ROPN1Q9HAT0 212 aaPredicted RBP18.62■□□□□ 0.57
PTPDC1-202ENST00000375360 SPECC1L-ADORA2AF8WAN1 911 aa18.62■□□□□ 0.57
PTPDC1-202ENST00000375360 ASS1P00966 412 aaKnown RBP18.62■□□□□ 0.57
PTPDC1-202ENST00000375360 SLC2A3P11169 496 aa18.62■□□□□ 0.57
PTPDC1-202ENST00000375360 MBL2P11226 248 aaPredicted RBP18.62■□□□□ 0.57
PTPDC1-202ENST00000375360 SPRP35270 261 aaPredicted RBP18.62■□□□□ 0.57
PTPDC1-202ENST00000375360 SLC39A12Q504Y0 691 aa18.62■□□□□ 0.57
PTPDC1-202ENST00000375360 PPTC7Q8NI37 304 aa18.62■□□□□ 0.57
PTPDC1-202ENST00000375360 C7orf43Q8WVR3 580 aa18.62■□□□□ 0.57
PTPDC1-202ENST00000375360 DHX33Q9H6R0 707 aaKnown RBP18.62■□□□□ 0.57
PTPDC1-202ENST00000375360 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP18.61■□□□□ 0.57
PTPDC1-202ENST00000375360 VCPP55072 806 aaKnown RBP18.61■□□□□ 0.57
PTPDC1-202ENST00000375360 SLC6A3Q01959 620 aa18.61■□□□□ 0.57
PTPDC1-202ENST00000375360 ZNF177Q13360 481 aaPredicted RBP18.61■□□□□ 0.57
PTPDC1-202ENST00000375360 BTG3Q14201 252 aaPredicted RBP18.61■□□□□ 0.57
PTPDC1-202ENST00000375360 ZNF473Q8WTR7 871 aaKnown RBP18.61■□□□□ 0.57
PTPDC1-202ENST00000375360 C18orf25Q96B23 403 aaPredicted RBP18.61■□□□□ 0.57
PTPDC1-202ENST00000375360 XAB2Q9HCS7 855 aaKnown RBP18.61■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 63.6 ms