RNA–Protein interactions for RNA: ENST00000373548.7

HDAC1-201, Transcript of histone deacetylase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC1, Length 2,124 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-201ENST00000373548 MRPL10Q7Z7H8 261 aaKnown RBP20.49■□□□□ 0.87
HDAC1-201ENST00000373548 TLCD1Q96CP7 247 aa20.49■□□□□ 0.87
HDAC1-201ENST00000373548 SENP8Q96LD8 212 aa20.49■□□□□ 0.87
HDAC1-201ENST00000373548 HSFY1Q96LI6 401 aa20.49■□□□□ 0.87
HDAC1-201ENST00000373548 PCDH9Q9HC56 1237 aa20.49■□□□□ 0.87
HDAC1-201ENST00000373548 GIT1Q9Y2X7 761 aa20.49■□□□□ 0.87
HDAC1-201ENST00000373548 PTPN1P18031 435 aaKnown RBP20.48■□□□□ 0.87
HDAC1-201ENST00000373548 TFE3P19532 575 aaPredicted RBP20.48■□□□□ 0.87
HDAC1-201ENST00000373548 ACADSBP45954 432 aa20.48■□□□□ 0.87
HDAC1-201ENST00000373548 SCNN1GP51170 649 aa20.48■□□□□ 0.87
HDAC1-201ENST00000373548 CLCNKBP51801 687 aa20.48■□□□□ 0.87
HDAC1-201ENST00000373548 HDAC4P56524 1084 aa20.48■□□□□ 0.87
HDAC1-201ENST00000373548 SKIDA1Q1XH10 827 aa20.48■□□□□ 0.87
HDAC1-201ENST00000373548 SCYL2Q6P3W7 929 aa20.48■□□□□ 0.87
HDAC1-201ENST00000373548 PCSK9Q8NBP7 692 aaKnown RBP20.48■□□□□ 0.87
HDAC1-201ENST00000373548 C11orf84Q9BUA3 381 aaPredicted RBP20.48■□□□□ 0.87
HDAC1-201ENST00000373548 C10orf88Q9H8K7 445 aa20.48■□□□□ 0.87
HDAC1-201ENST00000373548 GPATCH2LQ9NWQ4 482 aa20.48■□□□□ 0.87
HDAC1-201ENST00000373548 CLDN5O00501 218 aa20.48■□□□□ 0.87
HDAC1-201ENST00000373548 XPO1O14980 1071 aaKnown RBP20.48■□□□□ 0.87
HDAC1-201ENST00000373548 ACSL3O95573 720 aa20.48■□□□□ 0.87
HDAC1-201ENST00000373548 PTPN9P43378 593 aa20.48■□□□□ 0.87
HDAC1-201ENST00000373548 MAGOHP61326 146 aaKnown RBP20.48■□□□□ 0.87
HDAC1-201ENST00000373548 BOLA3Q53S33 107 aa20.48■□□□□ 0.87
HDAC1-201ENST00000373548 KIAA0319Q5VV43 1072 aa20.48■□□□□ 0.87
HDAC1-201ENST00000373548 PAQR9Q6ZVX9 377 aa20.48■□□□□ 0.87
HDAC1-201ENST00000373548 C3orf58Q8NDZ4 430 aa20.48■□□□□ 0.87
HDAC1-201ENST00000373548 TEKT4Q8WW24 435 aa20.48■□□□□ 0.87
HDAC1-201ENST00000373548 PGM2Q96G03 612 aa20.48■□□□□ 0.87
HDAC1-201ENST00000373548 ADAM33Q9BZ11 813 aa20.48■□□□□ 0.87
HDAC1-201ENST00000373548 TTC4O95801 387 aa20.47■□□□□ 0.87
HDAC1-201ENST00000373548 IFNB1P01574 187 aa20.47■□□□□ 0.87
HDAC1-201ENST00000373548 GDF10P55107 478 aa20.47■□□□□ 0.87
HDAC1-201ENST00000373548 DSC3Q14574 896 aa20.47■□□□□ 0.87
HDAC1-201ENST00000373548 LPIN1Q14693 890 aa20.47■□□□□ 0.87
HDAC1-201ENST00000373548 ZC3H12AQ5D1E8 599 aaKnown RBP20.47■□□□□ 0.87
HDAC1-201ENST00000373548 ARCQ7LC44 396 aa20.47■□□□□ 0.87
HDAC1-201ENST00000373548 PIGZQ86VD9 579 aa20.47■□□□□ 0.87
HDAC1-201ENST00000373548 ZCCHC9Q8N567 271 aaKnown RBP20.47■□□□□ 0.87
HDAC1-201ENST00000373548 EPS8L3Q8TE67 593 aaKnown RBP20.47■□□□□ 0.87
HDAC1-201ENST00000373548 SNRNP25Q9BV90 132 aaKnown RBP20.47■□□□□ 0.87
HDAC1-201ENST00000373548 DUSP16Q9BY84 665 aa20.47■□□□□ 0.87
HDAC1-201ENST00000373548 TRMT13Q9NUP7 481 aaKnown RBP20.47■□□□□ 0.87
HDAC1-201ENST00000373548 SRRDQ9UH36 339 aa20.47■□□□□ 0.87
HDAC1-201ENST00000373548 TPX2Q9ULW0 747 aaKnown RBP20.47■□□□□ 0.87
HDAC1-201ENST00000373548 TLDC2A0PJX2 215 aa20.47■□□□□ 0.87
HDAC1-201ENST00000373548 SMIM23A6NLE4 172 aa20.47■□□□□ 0.87
HDAC1-201ENST00000373548 A6NNZ2 444 aa20.47■□□□□ 0.87
HDAC1-201ENST00000373548 EIF3HO15372 352 aaKnown RBP eCLIP20.47■□□□□ 0.875e-11■■■□□ 14.9
HDAC1-201ENST00000373548 ZNF623O75123 536 aa20.47■□□□□ 0.87
HDAC1-201ENST00000373548 ITGA7Q13683 1181 aa20.47■□□□□ 0.87
HDAC1-201ENST00000373548 ZSCAN26Q16670 478 aa20.47■□□□□ 0.87
HDAC1-201ENST00000373548 KYNUQ16719 465 aa20.47■□□□□ 0.87
HDAC1-201ENST00000373548 TUBB8Q3ZCM7 444 aa20.47■□□□□ 0.87
HDAC1-201ENST00000373548 MAP3K21Q5TCX8 1036 aa20.47■□□□□ 0.87
HDAC1-201ENST00000373548 ARFGAP2Q8N6H7 521 aa20.47■□□□□ 0.87
HDAC1-201ENST00000373548 CAPNS2Q96L46 248 aa20.47■□□□□ 0.87
HDAC1-201ENST00000373548 TBCBQ99426 244 aa20.47■□□□□ 0.87
HDAC1-201ENST00000373548 FOXP3Q9BZS1 431 aa20.47■□□□□ 0.87
HDAC1-201ENST00000373548 NINJ2Q9NZG7 142 aa20.47■□□□□ 0.87
HDAC1-201ENST00000373548 TDRD15B5MCY1 1934 aaKnown RBP20.46■□□□□ 0.87
HDAC1-201ENST00000373548 IL4RP24394 825 aa20.46■□□□□ 0.87
HDAC1-201ENST00000373548 EIF3EP60228 445 aaKnown RBP20.46■□□□□ 0.87
HDAC1-201ENST00000373548 GUCY1A3Q02108 690 aa20.46■□□□□ 0.87
HDAC1-201ENST00000373548 PTK7Q13308 1070 aa20.46■□□□□ 0.87
HDAC1-201ENST00000373548 KRT81Q14533 505 aa20.46■□□□□ 0.87
HDAC1-201ENST00000373548 PDK2Q15119 407 aa20.46■□□□□ 0.87
HDAC1-201ENST00000373548 CA9Q16790 459 aa20.46■□□□□ 0.87
HDAC1-201ENST00000373548 TRIM71Q2Q1W2 868 aaKnown RBP20.46■□□□□ 0.87
HDAC1-201ENST00000373548 CROCCP2Q86T23 111 aa20.46■□□□□ 0.87
HDAC1-201ENST00000373548 RELL1Q8IUW5 271 aa20.46■□□□□ 0.87
HDAC1-201ENST00000373548 CENPIQ92674 756 aaPredicted RBP20.46■□□□□ 0.87
HDAC1-201ENST00000373548 RNF157Q96PX1 679 aa20.46■□□□□ 0.87
HDAC1-201ENST00000373548 NCAPGQ9BPX3 1015 aa20.46■□□□□ 0.87
HDAC1-201ENST00000373548 PAAF1Q9BRP4 392 aa20.46■□□□□ 0.87
HDAC1-201ENST00000373548 MAK16Q9BXY0 300 aaKnown RBP20.46■□□□□ 0.87
HDAC1-201ENST00000373548 PCDH18Q9HCL0 1135 aa20.46■□□□□ 0.87
HDAC1-201ENST00000373548 DDX43Q9NXZ2 648 aaKnown RBP20.46■□□□□ 0.87
HDAC1-201ENST00000373548 CASTOR2A6NHX0 329 aa20.45■□□□□ 0.86
HDAC1-201ENST00000373548 BEST1O76090 585 aa20.45■□□□□ 0.86
HDAC1-201ENST00000373548 DESP17661 470 aa20.45■□□□□ 0.86
HDAC1-201ENST00000373548 RAB27AP51159 221 aa20.45■□□□□ 0.86
HDAC1-201ENST00000373548 CDR1P51861 262 aa20.45■□□□□ 0.86
HDAC1-201ENST00000373548 TFDP2Q14188 446 aa20.45■□□□□ 0.86
HDAC1-201ENST00000373548 MDH1BQ5I0G3 518 aa20.45■□□□□ 0.86
HDAC1-201ENST00000373548 C6orf118Q5T5N4 469 aa20.45■□□□□ 0.86
HDAC1-201ENST00000373548 RNASEH2BQ5TBB1 312 aaKnown RBP20.45■□□□□ 0.86
HDAC1-201ENST00000373548 NPNTQ6UXI9 565 aa20.45■□□□□ 0.86
HDAC1-201ENST00000373548 MAP7D3Q8IWC1 876 aa20.45■□□□□ 0.86
HDAC1-201ENST00000373548 SPATA18Q8TC71 538 aa20.45■□□□□ 0.86
HDAC1-201ENST00000373548 CRTAC1Q9NQ79 661 aa20.45■□□□□ 0.86
HDAC1-201ENST00000373548 DDX20Q9UHI6 824 aaKnown RBP20.45■□□□□ 0.86
HDAC1-201ENST00000373548 SLC12A6Q9UHW9 1150 aa20.45■□□□□ 0.86
HDAC1-201ENST00000373548 MDM4O15151 490 aa20.45■□□□□ 0.86
HDAC1-201ENST00000373548 CAPN15O75808 1086 aa20.45■□□□□ 0.86
HDAC1-201ENST00000373548 NPR3P17342 541 aa20.45■□□□□ 0.86
HDAC1-201ENST00000373548 MDH1P40925 334 aaKnown RBP20.45■□□□□ 0.86
HDAC1-201ENST00000373548 PPP2R2AP63151 447 aa20.45■□□□□ 0.86
HDAC1-201ENST00000373548 ADIGQ0VDE8 80 aa20.45■□□□□ 0.86
HDAC1-201ENST00000373548 MORF4L2Q15014 288 aa20.45■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms