RNA–Protein interactions for RNA: ENST00000373193.7

PTPRT-205, Transcript of protein tyrosine phosphatase, receptor type T, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRT, Length 12,681 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRT-205ENST00000373193 COILP38432 576 aaPredicted RBP9.54□□□□□ -0.88
PTPRT-205ENST00000373193 SLC18A3Q16572 532 aa9.54□□□□□ -0.88
PTPRT-205ENST00000373193 MZT2BQ6NZ67 158 aa9.54□□□□□ -0.88
PTPRT-205ENST00000373193 CASP12Q6UXS9 341 aa9.54□□□□□ -0.88
PTPRT-205ENST00000373193 FRMD5Q7Z6J6 570 aa9.54□□□□□ -0.88
PTPRT-205ENST00000373193 METTL16Q86W50 562 aaKnown RBP9.54□□□□□ -0.88
PTPRT-205ENST00000373193 C18orf25Q96B23 403 aaPredicted RBP9.54□□□□□ -0.88
PTPRT-205ENST00000373193 CCDC17Q96LX7 622 aa9.54□□□□□ -0.88
PTPRT-205ENST00000373193 STK33Q9BYT3 514 aa9.54□□□□□ -0.88
PTPRT-205ENST00000373193 ARMCX1Q9P291 453 aa9.54□□□□□ -0.88
PTPRT-205ENST00000373193 CRLS1Q9UJA2 301 aa9.54□□□□□ -0.88
PTPRT-205ENST00000373193 WARSP23381 471 aaKnown RBP9.54□□□□□ -0.88
PTPRT-205ENST00000373193 GJA8P48165 433 aa9.54□□□□□ -0.88
PTPRT-205ENST00000373193 PTSQ03393 145 aa9.54□□□□□ -0.88
PTPRT-205ENST00000373193 GSTA3Q16772 222 aa9.54□□□□□ -0.88
PTPRT-205ENST00000373193 SHC4Q6S5L8 630 aa9.54□□□□□ -0.88
PTPRT-205ENST00000373193 RAD9BQ6WBX8 426 aa9.54□□□□□ -0.88
PTPRT-205ENST00000373193 COL23A1Q86Y22 540 aaPredicted RBP9.54□□□□□ -0.88
PTPRT-205ENST00000373193 SPATA2LQ8IUW3 424 aaPredicted RBP9.54□□□□□ -0.88
PTPRT-205ENST00000373193 ADI1Q9BV57 179 aa9.54□□□□□ -0.88
PTPRT-205ENST00000373193 POLR1DQ9Y2S0 133 aa9.54□□□□□ -0.88
PTPRT-205ENST00000373193 LYVE1Q9Y5Y7 322 aa9.54□□□□□ -0.88
PTPRT-205ENST00000373193 PMF1-BGLAPU3KQ54 211 aa9.54□□□□□ -0.88
PTPRT-205ENST00000373193 XDHP47989 1333 aa9.53□□□□□ -0.88
PTPRT-205ENST00000373193 OR6B1O95007 311 aa9.53□□□□□ -0.88
PTPRT-205ENST00000373193 PRKCQQ04759 706 aa9.53□□□□□ -0.88
PTPRT-205ENST00000373193 OCLNQ16625 522 aa9.53□□□□□ -0.88
PTPRT-205ENST00000373193 FAM83EQ2M2I3 478 aa9.53□□□□□ -0.88
PTPRT-205ENST00000373193 NEK5Q6P3R8 708 aa9.53□□□□□ -0.88
PTPRT-205ENST00000373193 OSBPL6Q9BZF3 934 aa9.53□□□□□ -0.88
PTPRT-205ENST00000373193 COPS7BQ9H9Q2 264 aaPredicted RBP9.53□□□□□ -0.88
PTPRT-205ENST00000373193 CHST12Q9NRB3 414 aa9.53□□□□□ -0.88
PTPRT-205ENST00000373193 RGS18Q9NS28 235 aa9.53□□□□□ -0.88
PTPRT-205ENST00000373193 MAFFQ9ULX9 164 aa9.53□□□□□ -0.88
PTPRT-205ENST00000373193 POLRMTO00411 1230 aaKnown RBP9.53□□□□□ -0.88
PTPRT-205ENST00000373193 RPL10AP62906 217 aaKnown RBP9.53□□□□□ -0.88
PTPRT-205ENST00000373193 POC5Q8NA72 575 aa9.53□□□□□ -0.88
PTPRT-205ENST00000373193 C1orf50Q9BV19 199 aa9.53□□□□□ -0.88
PTPRT-205ENST00000373193 PAK5Q9P286 719 aa9.53□□□□□ -0.88
PTPRT-205ENST00000373193 SCRN3Q0VDG4 424 aa9.53□□□□□ -0.88
PTPRT-205ENST00000373193 PFKFB3Q16875 520 aaPredicted RBP9.53□□□□□ -0.88
PTPRT-205ENST00000373193 FGD3Q5JSP0 725 aa9.53□□□□□ -0.88
PTPRT-205ENST00000373193 PMF1Q6P1K2 205 aa9.53□□□□□ -0.88
PTPRT-205ENST00000373193 KYQ8NBH2 561 aa9.53□□□□□ -0.88
PTPRT-205ENST00000373193 HMG20AQ9NP66 347 aa9.53□□□□□ -0.88
PTPRT-205ENST00000373193 PCDH12Q9NPG4 1184 aa9.53□□□□□ -0.88
PTPRT-205ENST00000373193 MROH7Q68CQ1 1323 aa9.53□□□□□ -0.88
PTPRT-205ENST00000373193 CST8O60676 142 aa9.53□□□□□ -0.88
PTPRT-205ENST00000373193 SOAT2O75908 522 aa9.53□□□□□ -0.88
PTPRT-205ENST00000373193 HSF2Q03933 536 aa9.53□□□□□ -0.88
PTPRT-205ENST00000373193 C11orf63Q6NUN7 778 aa9.53□□□□□ -0.88
PTPRT-205ENST00000373193 ARMC6Q6NXE6 501 aa9.53□□□□□ -0.88
PTPRT-205ENST00000373193 ZSWIM2Q8NEG5 633 aa9.53□□□□□ -0.88
PTPRT-205ENST00000373193 TRIM62Q9BVG3 475 aa9.53□□□□□ -0.88
PTPRT-205ENST00000373193 APEX2Q9UBZ4 518 aa9.53□□□□□ -0.88
PTPRT-205ENST00000373193 CARTPTQ16568 116 aa9.53□□□□□ -0.88
PTPRT-205ENST00000373193 TRMT5Q32P41 509 aaKnown RBP9.53□□□□□ -0.88
PTPRT-205ENST00000373193 MRPL48Q96GC5 212 aaKnown RBP9.53□□□□□ -0.88
PTPRT-205ENST00000373193 SLC35C2Q9NQQ7 365 aa9.53□□□□□ -0.88
PTPRT-205ENST00000373193 PSMD3O43242 534 aa9.53□□□□□ -0.88
PTPRT-205ENST00000373193 RPN2P04844 631 aa9.53□□□□□ -0.88
PTPRT-205ENST00000373193 DBTP11182 482 aaKnown RBP9.53□□□□□ -0.88
PTPRT-205ENST00000373193 CLK2P49760 499 aaKnown RBP9.53□□□□□ -0.88
PTPRT-205ENST00000373193 PTK6Q13882 451 aa9.53□□□□□ -0.88
PTPRT-205ENST00000373193 C2CD6Q53TS8 623 aa9.53□□□□□ -0.88
PTPRT-205ENST00000373193 RXFP1Q9HBX9 757 aa9.53□□□□□ -0.88
PTPRT-205ENST00000373193 ZNF304Q9HCX3 659 aa9.53□□□□□ -0.88
PTPRT-205ENST00000373193 ING3Q9NXR8 418 aa9.53□□□□□ -0.88
PTPRT-205ENST00000373193 FANCAO15360 1455 aa9.53□□□□□ -0.88
PTPRT-205ENST00000373193 CIAO1O76071 339 aa9.53□□□□□ -0.88
PTPRT-205ENST00000373193 MED8Q96G25 268 aa9.53□□□□□ -0.88
PTPRT-205ENST00000373193 RSPH9Q9H1X1 276 aaPredicted RBP9.53□□□□□ -0.88
PTPRT-205ENST00000373193 EXTL3O43909 919 aa9.53□□□□□ -0.88
PTPRT-205ENST00000373193 TDP2O95551 362 aa9.53□□□□□ -0.88
PTPRT-205ENST00000373193 FXR1P51114 621 aaKnown RBP eCLIP9.53□□□□□ -0.88
PTPRT-205ENST00000373193 GRIK3Q13003 919 aa9.53□□□□□ -0.88
PTPRT-205ENST00000373193 PDK1Q15118 436 aa9.53□□□□□ -0.88
PTPRT-205ENST00000373193 CD209Q9NNX6 404 aa9.53□□□□□ -0.88
PTPRT-205ENST00000373193 SLC25A13Q9UJS0 675 aa9.53□□□□□ -0.88
PTPRT-205ENST00000373193 POLR1AO95602 1720 aaPredicted RBP9.53□□□□□ -0.88
PTPRT-205ENST00000373193 FAM196BA6NMK8 535 aa9.53□□□□□ -0.88
PTPRT-205ENST00000373193 KATNA1O75449 491 aa9.53□□□□□ -0.88
PTPRT-205ENST00000373193 SEC24AO95486 1093 aa9.53□□□□□ -0.88
PTPRT-205ENST00000373193 LTFP02788 710 aa9.53□□□□□ -0.88
PTPRT-205ENST00000373193 FCGR1AP12314 374 aa9.53□□□□□ -0.88
PTPRT-205ENST00000373193 GPR162Q16538 588 aa9.53□□□□□ -0.88
PTPRT-205ENST00000373193 NUAK2Q9H093 628 aa9.53□□□□□ -0.88
PTPRT-205ENST00000373193 SLC34A1Q06495 639 aa9.53□□□□□ -0.88
PTPRT-205ENST00000373193 GOLGA7BQ2TAP0 167 aa9.53□□□□□ -0.88
PTPRT-205ENST00000373193 ERFEQ4G0M1 354 aa9.53□□□□□ -0.88
PTPRT-205ENST00000373193 GJB7Q6PEY0 223 aa9.53□□□□□ -0.88
PTPRT-205ENST00000373193 NT5DC3Q86UY8 548 aa9.53□□□□□ -0.88
PTPRT-205ENST00000373193 EID3Q8N140 333 aa9.53□□□□□ -0.88
PTPRT-205ENST00000373193 KIAA0232Q92628 1395 aa9.52□□□□□ -0.88
PTPRT-205ENST00000373193 MYO18AQ92614 2054 aaKnown RBP9.52□□□□□ -0.88
PTPRT-205ENST00000373193 NAB2Q15742 525 aa9.52□□□□□ -0.88
PTPRT-205ENST00000373193 USP38Q8NB14 1042 aa9.52□□□□□ -0.88
PTPRT-205ENST00000373193 UBA3Q8TBC4 463 aa9.52□□□□□ -0.88
PTPRT-205ENST00000373193 MAML3Q96JK9 1138 aa9.52□□□□□ -0.88
PTPRT-205ENST00000373193 SERPINB12Q96P63 405 aa9.52□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms