RNA–Protein interactions for RNA: ENST00000372246.7

ATG4A-204, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 1 (best)

Gene ATG4A, Length 2,501 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-204ENST00000372246 PROCP04070 461 aa5.65□□□□□ -1.5
ATG4A-204ENST00000372246 GZMAP12544 262 aa5.65□□□□□ -1.5
ATG4A-204ENST00000372246 ARSAP15289 507 aa5.65□□□□□ -1.5
ATG4A-204ENST00000372246 IL1R2P27930 398 aa5.65□□□□□ -1.5
ATG4A-204ENST00000372246 RPL22P35268 128 aaKnown RBP5.65□□□□□ -1.5
ATG4A-204ENST00000372246 ABCG1P45844 678 aa5.65□□□□□ -1.5
ATG4A-204ENST00000372246 CDK7P50613 346 aa5.65□□□□□ -1.5
ATG4A-204ENST00000372246 CRADDP78560 199 aa5.65□□□□□ -1.5
ATG4A-204ENST00000372246 ZNF200P98182 395 aaPredicted RBP5.65□□□□□ -1.5
ATG4A-204ENST00000372246 OTUD4Q01804 1114 aaKnown RBP5.65□□□□□ -1.5
ATG4A-204ENST00000372246 ASPHQ12797 758 aa5.65□□□□□ -1.5
ATG4A-204ENST00000372246 LSAMPQ13449 338 aa5.65□□□□□ -1.5
ATG4A-204ENST00000372246 CCNIQ14094 377 aa5.65□□□□□ -1.5
ATG4A-204ENST00000372246 TLR1Q15399 786 aa5.65□□□□□ -1.5
ATG4A-204ENST00000372246 MROH9Q5TGP6 573 aa5.65□□□□□ -1.5
ATG4A-204ENST00000372246 CLEC4GQ6UXB4 293 aa5.65□□□□□ -1.5
ATG4A-204ENST00000372246 SCARA5Q6ZMJ2 495 aa5.65□□□□□ -1.5
ATG4A-204ENST00000372246 MON1BQ7L1V2 547 aa5.65□□□□□ -1.5
ATG4A-204ENST00000372246 RETREG3Q86VR2 466 aa5.65□□□□□ -1.5
ATG4A-204ENST00000372246 PALM2Q8IXS6 379 aa5.65□□□□□ -1.5
ATG4A-204ENST00000372246 KIAA0319LQ8IZA0 1049 aa5.65□□□□□ -1.5
ATG4A-204ENST00000372246 GALNT4Q8N4A0 578 aa5.65□□□□□ -1.5
ATG4A-204ENST00000372246 ALLCQ8N6M5 410 aa5.65□□□□□ -1.5
ATG4A-204ENST00000372246 ZNF713Q8N859 430 aaPredicted RBP5.65□□□□□ -1.5
ATG4A-204ENST00000372246 OR6Y1Q8NGX8 325 aa5.65□□□□□ -1.5
ATG4A-204ENST00000372246 ACTL9Q8TC94 416 aa5.65□□□□□ -1.5
ATG4A-204ENST00000372246 GRK7Q8WTQ7 553 aa5.65□□□□□ -1.5
ATG4A-204ENST00000372246 GDPD5Q8WTR4 605 aa5.65□□□□□ -1.5
ATG4A-204ENST00000372246 TMIGD2Q96BF3 282 aa5.65□□□□□ -1.5
ATG4A-204ENST00000372246 PGBD4Q96DM1 585 aa5.65□□□□□ -1.5
ATG4A-204ENST00000372246 HIC2Q96JB3 615 aa5.65□□□□□ -1.5
ATG4A-204ENST00000372246 CNBD2Q96M20 576 aa5.65□□□□□ -1.5
ATG4A-204ENST00000372246 FAM20AQ96MK3 541 aa5.65□□□□□ -1.5
ATG4A-204ENST00000372246 AGAP3Q96P47 875 aa5.65□□□□□ -1.5
ATG4A-204ENST00000372246 SLITRK1Q96PX8 696 aa5.65□□□□□ -1.5
ATG4A-204ENST00000372246 STRA6Q9BX79 667 aa5.65□□□□□ -1.5
ATG4A-204ENST00000372246 MAGEB5Q9BZ81 275 aa5.65□□□□□ -1.5
ATG4A-204ENST00000372246 TUT1Q9H6E5 874 aaKnown RBP5.65□□□□□ -1.5
ATG4A-204ENST00000372246 C17orf75Q9HAS0 396 aa5.65□□□□□ -1.5
ATG4A-204ENST00000372246 DMAP1Q9NPF5 467 aaPredicted RBP5.65□□□□□ -1.5
ATG4A-204ENST00000372246 SMYD2Q9NRG4 433 aa5.65□□□□□ -1.5
ATG4A-204ENST00000372246 UVRAGQ9P2Y5 699 aa5.65□□□□□ -1.5
ATG4A-204ENST00000372246 XPO7Q9UIA9 1087 aaKnown RBP5.65□□□□□ -1.5
ATG4A-204ENST00000372246 PHF24Q9UPV7 400 aa5.65□□□□□ -1.5
ATG4A-204ENST00000372246 TNRC6CQ9HCJ0 1690 aaKnown RBP5.65□□□□□ -1.51
ATG4A-204ENST00000372246 TCRBV9S1A1TA0A576 114 aa5.65□□□□□ -1.51
ATG4A-204ENST00000372246 CAPN14A8MX76 684 aa5.65□□□□□ -1.51
ATG4A-204ENST00000372246 TRIM49D1C9J1S8 452 aa5.65□□□□□ -1.51
ATG4A-204ENST00000372246 ALOX15BO15296 676 aa5.65□□□□□ -1.51
ATG4A-204ENST00000372246 ZSCAN9O15535 394 aaPredicted RBP5.65□□□□□ -1.51
ATG4A-204ENST00000372246 ADCY6O43306 1168 aa5.65□□□□□ -1.51
ATG4A-204ENST00000372246 DNAJC6O75061 913 aa5.65□□□□□ -1.51
ATG4A-204ENST00000372246 DGKIO75912 1065 aa5.65□□□□□ -1.51
ATG4A-204ENST00000372246 SETSIPP0DME0 302 aa5.65□□□□□ -1.51
ATG4A-204ENST00000372246 ARRB2P32121 409 aa5.65□□□□□ -1.51
ATG4A-204ENST00000372246 GRIA1P42261 906 aa5.65□□□□□ -1.51
ATG4A-204ENST00000372246 ETV4P43268 484 aa5.65□□□□□ -1.51
ATG4A-204ENST00000372246 MRPS5P82675 430 aaKnown RBP5.65□□□□□ -1.51
ATG4A-204ENST00000372246 CETN1Q12798 172 aa5.65□□□□□ -1.51
ATG4A-204ENST00000372246 EFHC2Q5JST6 749 aa5.65□□□□□ -1.51
ATG4A-204ENST00000372246 APOBEC3HQ6NTF7 200 aaKnown RBP5.65□□□□□ -1.51
ATG4A-204ENST00000372246 TRMT10BQ6PF06 316 aaKnown RBP5.65□□□□□ -1.51
ATG4A-204ENST00000372246 CENPUQ71F23 418 aa5.65□□□□□ -1.51
ATG4A-204ENST00000372246 MARK2Q7KZI7 788 aaKnown RBP5.65□□□□□ -1.51
ATG4A-204ENST00000372246 RHOT1Q8IXI2 618 aa5.65□□□□□ -1.51
ATG4A-204ENST00000372246 CPXCR1Q8N123 301 aa5.65□□□□□ -1.51
ATG4A-204ENST00000372246 PHTF2Q8N3S3 785 aa5.65□□□□□ -1.51
ATG4A-204ENST00000372246 FAM156AQ8NDB6 213 aa5.65□□□□□ -1.51
ATG4A-204ENST00000372246 FBXL13Q8NEE6 735 aa5.65□□□□□ -1.51
ATG4A-204ENST00000372246 CXorf38Q8TB03 319 aa5.65□□□□□ -1.51
ATG4A-204ENST00000372246 ZNF512Q96ME7 567 aaPredicted RBP5.65□□□□□ -1.51
ATG4A-204ENST00000372246 ZNF778Q96MU6 729 aa5.65□□□□□ -1.51
ATG4A-204ENST00000372246 TRAPPC9Q96Q05 1148 aa5.65□□□□□ -1.51
ATG4A-204ENST00000372246 SRPK1Q96SB4 655 aaKnown RBP5.65□□□□□ -1.51
ATG4A-204ENST00000372246 MXRA8Q9BRK3 442 aa5.65□□□□□ -1.51
ATG4A-204ENST00000372246 SAR1AQ9NR31 198 aa5.65□□□□□ -1.51
ATG4A-204ENST00000372246 ARHGEF38Q9NXL2 777 aa5.65□□□□□ -1.51
ATG4A-204ENST00000372246 MAGED2Q9UNF1 606 aaPredicted RBP5.65□□□□□ -1.51
ATG4A-204ENST00000372246 SMG5Q9UPR3 1016 aaKnown RBP5.65□□□□□ -1.51
ATG4A-204ENST00000372246 LTBP4Q8N2S1 1624 aa5.64□□□□□ -1.51
ATG4A-204ENST00000372246 GAKO14976 1311 aa5.64□□□□□ -1.51
ATG4A-204ENST00000372246 ZNF541Q9H0D2 1346 aa5.64□□□□□ -1.51
ATG4A-204ENST00000372246 CNTNAP2Q9UHC6 1331 aa5.64□□□□□ -1.51
ATG4A-204ENST00000372246 H3BSA7 217 aa5.64□□□□□ -1.51
ATG4A-204ENST00000372246 STX16-NPEPL1H3BU86 382 aa5.64□□□□□ -1.51
ATG4A-204ENST00000372246 NFIBO00712 420 aa5.64□□□□□ -1.51
ATG4A-204ENST00000372246 CST8O60676 142 aa5.64□□□□□ -1.51
ATG4A-204ENST00000372246 SUPT3HO75486 399 aa5.64□□□□□ -1.51
ATG4A-204ENST00000372246 TOM1L1O75674 476 aa5.64□□□□□ -1.51
ATG4A-204ENST00000372246 ASLP04424 464 aa5.64□□□□□ -1.51
ATG4A-204ENST00000372246 ITGA2BP08514 1039 aa5.64□□□□□ -1.51
ATG4A-204ENST00000372246 SMIM18P0DKX4 95 aa5.64□□□□□ -1.51
ATG4A-204ENST00000372246 RAG1P15918 1043 aa5.64□□□□□ -1.51
ATG4A-204ENST00000372246 VCLP18206 1134 aa5.64□□□□□ -1.51
ATG4A-204ENST00000372246 TNNI1P19237 187 aa5.64□□□□□ -1.51
ATG4A-204ENST00000372246 TCN1P20061 433 aaPredicted RBP5.64□□□□□ -1.51
ATG4A-204ENST00000372246 ADORA2AP29274 412 aa5.64□□□□□ -1.51
ATG4A-204ENST00000372246 GJA5P36382 358 aa5.64□□□□□ -1.51
ATG4A-204ENST00000372246 CCR10P46092 362 aa5.64□□□□□ -1.51
ATG4A-204ENST00000372246 RARRES1P49788 294 aa5.64□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms