RNA–Protein interactions for RNA: ENST00000372243.7

TMEM53-204, Transcript of transmembrane protein 53, humanhuman

TSL 2 BASIC

Gene TMEM53, Length 1,579 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-204ENST00000372243 UVRAGQ9P2Y5 699 aa16.66■□□□□ 0.26
TMEM53-204ENST00000372243 ASB3Q9Y575 518 aa16.66■□□□□ 0.26
TMEM53-204ENST00000372243 FAM170AA1A519 330 aa16.65■□□□□ 0.26
TMEM53-204ENST00000372243 SLC38A8A6NNN8 435 aa16.65■□□□□ 0.26
TMEM53-204ENST00000372243 SOX1O00570 391 aaPredicted RBP16.65■□□□□ 0.26
TMEM53-204ENST00000372243 MTA2O94776 668 aa16.65■□□□□ 0.26
TMEM53-204ENST00000372243 GLI1P08151 1106 aa16.65■□□□□ 0.26
TMEM53-204ENST00000372243 SPATA31D3P0C874 917 aa16.65■□□□□ 0.26
TMEM53-204ENST00000372243 EPHB3P54753 998 aa16.65■□□□□ 0.26
TMEM53-204ENST00000372243 HADHBP55084 474 aaKnown RBP16.65■□□□□ 0.26
TMEM53-204ENST00000372243 DAOAP59103 153 aa16.65■□□□□ 0.26
TMEM53-204ENST00000372243 MAMLD1Q13495 774 aa16.65■□□□□ 0.26
TMEM53-204ENST00000372243 VEPH1Q14D04 833 aa16.65■□□□□ 0.26
TMEM53-204ENST00000372243 EFHC1Q5JVL4 640 aa16.65■□□□□ 0.26
TMEM53-204ENST00000372243 PPP1R15BQ5SWA1 713 aa16.65■□□□□ 0.26
TMEM53-204ENST00000372243 SDHAF4Q5VUM1 108 aa16.65■□□□□ 0.26
TMEM53-204ENST00000372243 SPATA31D4Q6ZUB0 917 aa16.65■□□□□ 0.26
TMEM53-204ENST00000372243 SLC26A9Q7LBE3 791 aa16.65■□□□□ 0.26
TMEM53-204ENST00000372243 ARCQ7LC44 396 aa16.65■□□□□ 0.26
TMEM53-204ENST00000372243 REXO1L1PQ8IX06 675 aa16.65■□□□□ 0.26
TMEM53-204ENST00000372243 TRMT2BQ96GJ1 504 aaKnown RBP16.65■□□□□ 0.26
TMEM53-204ENST00000372243 MYRFLQ96LU7 910 aa16.65■□□□□ 0.26
TMEM53-204ENST00000372243 ULBP1Q9BZM6 244 aa16.65■□□□□ 0.26
TMEM53-204ENST00000372243 ASNSD1Q9NWL6 643 aa16.65■□□□□ 0.26
TMEM53-204ENST00000372243 TFR2Q9UP52 801 aa16.65■□□□□ 0.26
TMEM53-204ENST00000372243 HCFC2Q9Y5Z7 792 aa16.65■□□□□ 0.26
TMEM53-204ENST00000372243 TRIOBPQ9H2D6 2365 aa16.64■□□□□ 0.26
TMEM53-204ENST00000372243 SIGLEC16A6NMB1 481 aa16.64■□□□□ 0.25
TMEM53-204ENST00000372243 PIK3R2O00459 728 aa16.64■□□□□ 0.25
TMEM53-204ENST00000372243 PER2O15055 1255 aa16.64■□□□□ 0.25
TMEM53-204ENST00000372243 ZMYND10O75800 440 aa16.64■□□□□ 0.25
TMEM53-204ENST00000372243 LRG1P02750 347 aa16.64■□□□□ 0.25
TMEM53-204ENST00000372243 EPCAMP16422 314 aa16.64■□□□□ 0.25
TMEM53-204ENST00000372243 ARHGAP25P42331 645 aa16.64■□□□□ 0.25
TMEM53-204ENST00000372243 NRIP1P48552 1158 aa16.64■□□□□ 0.25
TMEM53-204ENST00000372243 TWF1Q12792 350 aa16.64■□□□□ 0.25
TMEM53-204ENST00000372243 KCNC3Q14003 757 aa16.64■□□□□ 0.25
TMEM53-204ENST00000372243 ZNF697Q5TEC3 545 aa16.64■□□□□ 0.25
TMEM53-204ENST00000372243 GPR153Q6NV75 609 aa16.64■□□□□ 0.25
TMEM53-204ENST00000372243 DNAJC24Q6P3W2 148 aa16.64■□□□□ 0.25
TMEM53-204ENST00000372243 RBM23Q86U06 439 aaKnown RBP16.64■□□□□ 0.25
TMEM53-204ENST00000372243 ITIH5Q86UX2 942 aa16.64■□□□□ 0.25
TMEM53-204ENST00000372243 SCAMP5Q8TAC9 235 aa16.64■□□□□ 0.25
TMEM53-204ENST00000372243 SLC35G2Q8TBE7 412 aa16.64■□□□□ 0.25
TMEM53-204ENST00000372243 PSMG2Q969U7 264 aa16.64■□□□□ 0.25
TMEM53-204ENST00000372243 SELENOOQ9BVL4 669 aa16.64■□□□□ 0.25
TMEM53-204ENST00000372243 PRDM12Q9H4Q4 367 aa16.64■□□□□ 0.25
TMEM53-204ENST00000372243 MAN1C1Q9NR34 630 aa16.64■□□□□ 0.25
TMEM53-204ENST00000372243 MYO1AQ9UBC5 1043 aa16.64■□□□□ 0.25
TMEM53-204ENST00000372243 SCML2Q9UQR0 700 aa16.64■□□□□ 0.25
TMEM53-204ENST00000372243 A0A0U1RQJ8 604 aa16.64■□□□□ 0.25
TMEM53-204ENST00000372243 ATMINO43313 823 aaPredicted RBP16.64■□□□□ 0.25
TMEM53-204ENST00000372243 PAPLNO95428 1278 aa16.64■□□□□ 0.25
TMEM53-204ENST00000372243 POU2F2P09086 479 aa16.64■□□□□ 0.25
TMEM53-204ENST00000372243 HNRNPA1P09651 372 aaKnown RBP eCLIP16.64■□□□□ 0.25
TMEM53-204ENST00000372243 KRT3P12035 628 aa16.64■□□□□ 0.25
TMEM53-204ENST00000372243 YWHAQP27348 245 aa16.64■□□□□ 0.25
TMEM53-204ENST00000372243 GRIN2CQ14957 1233 aa16.64■□□□□ 0.25
TMEM53-204ENST00000372243 ARHGAP29Q52LW3 1261 aa16.64■□□□□ 0.25
TMEM53-204ENST00000372243 PPM1LQ5SGD2 360 aa16.64■□□□□ 0.25
TMEM53-204ENST00000372243 FAM102AQ5T9C2 384 aaPredicted RBP16.64■□□□□ 0.25
TMEM53-204ENST00000372243 ZSCAN30Q86W11 494 aa16.64■□□□□ 0.25
TMEM53-204ENST00000372243 RNF10Q8N5U6 811 aaKnown RBP16.64■□□□□ 0.25
TMEM53-204ENST00000372243 GPR152Q8TDT2 470 aa16.64■□□□□ 0.25
TMEM53-204ENST00000372243 GIPC2Q8TF65 315 aa16.64■□□□□ 0.25
TMEM53-204ENST00000372243 ATRIPQ8WXE1 791 aa16.64■□□□□ 0.25
TMEM53-204ENST00000372243 OVCA2Q8WZ82 227 aa16.64■□□□□ 0.25
TMEM53-204ENST00000372243 NUP85Q9BW27 656 aa16.64■□□□□ 0.25
TMEM53-204ENST00000372243 ZDHHC7Q9NXF8 308 aa16.64■□□□□ 0.25
TMEM53-204ENST00000372243 CTTNBP2NLQ9P2B4 639 aa16.64■□□□□ 0.25
TMEM53-204ENST00000372243 TMEM59LQ9UK28 342 aa16.64■□□□□ 0.25
TMEM53-204ENST00000372243 CDH23Q9H251 3354 aa16.63■□□□□ 0.25
TMEM53-204ENST00000372243 GOLGA8SH3BPF8 625 aa16.63■□□□□ 0.25
TMEM53-204ENST00000372243 HSF2BPO75031 334 aa16.63■□□□□ 0.25
TMEM53-204ENST00000372243 USP17L7P0C7H9 530 aa16.63■□□□□ 0.25
TMEM53-204ENST00000372243 HMGA1P17096 107 aaKnown RBP16.63■□□□□ 0.25
TMEM53-204ENST00000372243 USP46P62068 366 aa16.63■□□□□ 0.25
TMEM53-204ENST00000372243 LLGL2Q6P1M3 1020 aa16.63■□□□□ 0.25
TMEM53-204ENST00000372243 TMEM184AQ6ZMB5 413 aa16.63■□□□□ 0.25
TMEM53-204ENST00000372243 BEND5Q7L4P6 421 aa16.63■□□□□ 0.25
TMEM53-204ENST00000372243 BHLHA9Q7RTU4 235 aa16.63■□□□□ 0.25
TMEM53-204ENST00000372243 MON1AQ86VX9 555 aa16.63■□□□□ 0.25
TMEM53-204ENST00000372243 ARHGAP18Q8N392 663 aa16.63■□□□□ 0.25
TMEM53-204ENST00000372243 FEZF2Q8TBJ5 459 aa16.63■□□□□ 0.25
TMEM53-204ENST00000372243 CLEC4CQ8WTT0 213 aa16.63■□□□□ 0.25
TMEM53-204ENST00000372243 KHSRPQ92945 711 aaKnown RBP eCLIP16.63■□□□□ 0.25
TMEM53-204ENST00000372243 PIWIL1Q96J94 861 aaKnown RBP16.63■□□□□ 0.25
TMEM53-204ENST00000372243 TRIM62Q9BVG3 475 aa16.63■□□□□ 0.25
TMEM53-204ENST00000372243 LCMT1Q9UIC8 334 aa16.63■□□□□ 0.25
TMEM53-204ENST00000372243 DUSP10Q9Y6W6 482 aa16.63■□□□□ 0.25
TMEM53-204ENST00000372243 MYO7AQ13402 2215 aa16.63■□□□□ 0.25
TMEM53-204ENST00000372243 ZNF638Q14966 1978 aaKnown RBP16.62■□□□□ 0.25
TMEM53-204ENST00000372243 TMEM191CA6NGB0 347 aa16.62■□□□□ 0.25
TMEM53-204ENST00000372243 PSEN1P49768 467 aa16.62■□□□□ 0.25
TMEM53-204ENST00000372243 YWHAZP63104 245 aaKnown RBP16.62■□□□□ 0.25
TMEM53-204ENST00000372243 MTMR3Q13615 1198 aa16.62■□□□□ 0.25
TMEM53-204ENST00000372243 IFI16Q16666 785 aaKnown RBP16.62■□□□□ 0.25
TMEM53-204ENST00000372243 DNAJB7Q7Z6W7 309 aaPredicted RBP16.62■□□□□ 0.25
TMEM53-204ENST00000372243 PHLDB2Q86SQ0 1253 aa16.62■□□□□ 0.25
TMEM53-204ENST00000372243 ELMOD1Q8N336 334 aa16.62■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms