RNA–Protein interactions for RNA: ENST00000371746.7

LHX3-201, Transcript of LIM homeobox 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LHX3, Length 2,403 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LHX3-201ENST00000371746 PAAF1Q9BRP4 392 aa24.84■■□□□ 1.57
LHX3-201ENST00000371746 TIMM13Q9Y5L4 95 aaPredicted RBP24.84■■□□□ 1.57
LHX3-201ENST00000371746 KYNUQ16719 465 aa24.83■■□□□ 1.57
LHX3-201ENST00000371746 B4GALNT4Q76KP1 1039 aa24.83■■□□□ 1.57
LHX3-201ENST00000371746 SLC38A7Q9NVC3 462 aa24.83■■□□□ 1.57
LHX3-201ENST00000371746 CASTOR2A6NHX0 329 aa24.83■■□□□ 1.56
LHX3-201ENST00000371746 HDAC4P56524 1084 aa24.83■■□□□ 1.56
LHX3-201ENST00000371746 SNX16P57768 344 aa24.83■■□□□ 1.56
LHX3-201ENST00000371746 DPYSL3Q14195 570 aa24.83■■□□□ 1.56
LHX3-201ENST00000371746 KIAA0319Q5VV43 1072 aa24.83■■□□□ 1.56
LHX3-201ENST00000371746 HACE1Q8IYU2 909 aa24.83■■□□□ 1.56
LHX3-201ENST00000371746 BBOF1Q8ND07 529 aa24.83■■□□□ 1.56
LHX3-201ENST00000371746 NDRG1Q92597 394 aaKnown RBP24.83■■□□□ 1.56
LHX3-201ENST00000371746 SENP8Q96LD8 212 aa24.83■■□□□ 1.56
LHX3-201ENST00000371746 RSAD1Q9HA92 442 aa24.83■■□□□ 1.56
LHX3-201ENST00000371746 ATXN1P54253 815 aaKnown RBP24.82■■□□□ 1.56
LHX3-201ENST00000371746 EMC10Q5UCC4 262 aa24.82■■□□□ 1.56
LHX3-201ENST00000371746 NPNTQ6UXI9 565 aa24.82■■□□□ 1.56
LHX3-201ENST00000371746 RPAINQ86UA6 219 aa24.82■■□□□ 1.56
LHX3-201ENST00000371746 ZDHHC17Q8IUH5 632 aa24.82■■□□□ 1.56
LHX3-201ENST00000371746 CCHCR1Q8TD31 782 aa24.82■■□□□ 1.56
LHX3-201ENST00000371746 BEST1O76090 585 aa24.82■■□□□ 1.56
LHX3-201ENST00000371746 CA9Q16790 459 aa24.82■■□□□ 1.56
LHX3-201ENST00000371746 SLC26A9Q7LBE3 791 aa24.82■■□□□ 1.56
LHX3-201ENST00000371746 PIGZQ86VD9 579 aa24.82■■□□□ 1.56
LHX3-201ENST00000371746 TTC13Q8NBP0 860 aa24.82■■□□□ 1.56
LHX3-201ENST00000371746 APOC4-APOC2K7ER74 178 aa24.81■■□□□ 1.56
LHX3-201ENST00000371746 DNALI1O14645 258 aaPredicted RBP24.81■■□□□ 1.56
LHX3-201ENST00000371746 ENDOD1O94919 500 aa24.81■■□□□ 1.56
LHX3-201ENST00000371746 APOC2P02655 101 aa24.81■■□□□ 1.56
LHX3-201ENST00000371746 PTPN1P18031 435 aaKnown RBP24.81■■□□□ 1.56
LHX3-201ENST00000371746 KRT81Q14533 505 aa24.81■■□□□ 1.56
LHX3-201ENST00000371746 NOD1Q9Y239 953 aa24.81■■□□□ 1.56
LHX3-201ENST00000371746 TTC4O95801 387 aa24.81■■□□□ 1.56
LHX3-201ENST00000371746 MDH1BQ5I0G3 518 aa24.81■■□□□ 1.56
LHX3-201ENST00000371746 FOXR1Q6PIV2 292 aa24.81■■□□□ 1.56
LHX3-201ENST00000371746 PAQR9Q6ZVX9 377 aa24.81■■□□□ 1.56
LHX3-201ENST00000371746 TAB3Q8N5C8 712 aaPredicted RBP24.81■■□□□ 1.56
LHX3-201ENST00000371746 SPATA18Q8TC71 538 aa24.81■■□□□ 1.56
LHX3-201ENST00000371746 SNRNP25Q9BV90 132 aaKnown RBP24.81■■□□□ 1.56
LHX3-201ENST00000371746 MAK16Q9BXY0 300 aaKnown RBP24.81■■□□□ 1.56
LHX3-201ENST00000371746 TSPYL1Q9H0U9 437 aa24.81■■□□□ 1.56
LHX3-201ENST00000371746 PCDH9Q9HC56 1237 aa24.81■■□□□ 1.56
LHX3-201ENST00000371746 GABRDO14764 452 aa24.8■■□□□ 1.56
LHX3-201ENST00000371746 EIF3HO15372 352 aaKnown RBP eCLIP24.8■■□□□ 1.56
LHX3-201ENST00000371746 RPL34P49207 117 aaKnown RBP24.8■■□□□ 1.56
LHX3-201ENST00000371746 NRLP54845 237 aa24.8■■□□□ 1.56
LHX3-201ENST00000371746 ADIGQ0VDE8 80 aa24.8■■□□□ 1.56
LHX3-201ENST00000371746 LPIN1Q14693 890 aa24.8■■□□□ 1.56
LHX3-201ENST00000371746 FAM182AQ5T1J6 154 aa24.8■■□□□ 1.56
LHX3-201ENST00000371746 TLCD1Q96CP7 247 aa24.8■■□□□ 1.56
LHX3-201ENST00000371746 C9orf72Q96LT7 481 aa24.8■■□□□ 1.56
LHX3-201ENST00000371746 HNRNPABQ99729 332 aaKnown RBP24.8■■□□□ 1.56
LHX3-201ENST00000371746 DDX43Q9NXZ2 648 aaKnown RBP24.8■■□□□ 1.56
LHX3-201ENST00000371746 NINJ2Q9NZG7 142 aa24.8■■□□□ 1.56
LHX3-201ENST00000371746 IL4RP24394 825 aa24.8■■□□□ 1.56
LHX3-201ENST00000371746 EIF3EP60228 445 aaKnown RBP24.8■■□□□ 1.56
LHX3-201ENST00000371746 ITGA7Q13683 1181 aa24.8■■□□□ 1.56
LHX3-201ENST00000371746 ZCCHC9Q8N567 271 aaKnown RBP24.8■■□□□ 1.56
LHX3-201ENST00000371746 CAPNS2Q96L46 248 aa24.8■■□□□ 1.56
LHX3-201ENST00000371746 RBM15Q96T37 977 aaKnown RBP eCLIP24.8■■□□□ 1.56
LHX3-201ENST00000371746 TPX2Q9ULW0 747 aaKnown RBP24.8■■□□□ 1.56
LHX3-201ENST00000371746 POMCP01189 267 aa24.79■■□□□ 1.56
LHX3-201ENST00000371746 CST5P28325 142 aaPredicted RBP24.79■■□□□ 1.56
LHX3-201ENST00000371746 RABGGTBP53611 331 aa24.79■■□□□ 1.56
LHX3-201ENST00000371746 HNRNPH2P55795 449 aaKnown RBP24.79■■□□□ 1.56
LHX3-201ENST00000371746 IFI35P80217 286 aaPredicted RBP24.79■■□□□ 1.56
LHX3-201ENST00000371746 LONRF1Q17RB8 773 aa24.79■■□□□ 1.56
LHX3-201ENST00000371746 PAN2Q504Q3 1202 aaKnown RBP24.79■■□□□ 1.56
LHX3-201ENST00000371746 BOLA3Q53S33 107 aa24.79■■□□□ 1.56
LHX3-201ENST00000371746 ZC3H18Q86VM9 953 aaKnown RBP24.79■■□□□ 1.56
LHX3-201ENST00000371746 UNC45BQ8IWX7 931 aa24.79■■□□□ 1.56
LHX3-201ENST00000371746 PGM2Q96G03 612 aa24.79■■□□□ 1.56
LHX3-201ENST00000371746 HSFY1Q96LI6 401 aa24.79■■□□□ 1.56
LHX3-201ENST00000371746 DUSP16Q9BY84 665 aa24.79■■□□□ 1.56
LHX3-201ENST00000371746 CRTAC1Q9NQ79 661 aa24.79■■□□□ 1.56
LHX3-201ENST00000371746 GIT1Q9Y2X7 761 aa24.79■■□□□ 1.56
LHX3-201ENST00000371746 RASGRF2O14827 1237 aa24.78■■□□□ 1.56
LHX3-201ENST00000371746 XPO1O14980 1071 aaKnown RBP24.78■■□□□ 1.56
LHX3-201ENST00000371746 RBP3P10745 1247 aa24.78■■□□□ 1.56
LHX3-201ENST00000371746 PPP6R3Q5H9R7 873 aaPredicted RBP24.78■■□□□ 1.56
LHX3-201ENST00000371746 FAM71DQ8N9W8 422 aa24.78■■□□□ 1.56
LHX3-201ENST00000371746 CD99L2Q8TCZ2 262 aa24.78■■□□□ 1.56
LHX3-201ENST00000371746 RSAD2Q8WXG1 361 aa24.78■■□□□ 1.56
LHX3-201ENST00000371746 C11orf84Q9BUA3 381 aaPredicted RBP24.78■■□□□ 1.56
LHX3-201ENST00000371746 MAGEB5Q9BZ81 275 aa24.78■■□□□ 1.56
LHX3-201ENST00000371746 DNAI2Q9GZS0 605 aa24.78■■□□□ 1.56
LHX3-201ENST00000371746 PCDH18Q9HCL0 1135 aa24.78■■□□□ 1.56
LHX3-201ENST00000371746 SLC12A6Q9UHW9 1150 aa24.78■■□□□ 1.56
LHX3-201ENST00000371746 I3L4J1 428 aa24.78■■□□□ 1.56
LHX3-201ENST00000371746 RGS16O15492 202 aaPredicted RBP24.78■■□□□ 1.56
LHX3-201ENST00000371746 NPR3P17342 541 aa24.78■■□□□ 1.56
LHX3-201ENST00000371746 MDH1P40925 334 aaKnown RBP24.78■■□□□ 1.56
LHX3-201ENST00000371746 ACADSBP45954 432 aa24.78■■□□□ 1.56
LHX3-201ENST00000371746 HP1BP3Q5SSJ5 553 aaPredicted RBP24.78■■□□□ 1.56
LHX3-201ENST00000371746 RNASEH2BQ5TBB1 312 aaKnown RBP24.78■■□□□ 1.56
LHX3-201ENST00000371746 C1orf228Q6PIY5 440 aa24.78■■□□□ 1.56
LHX3-201ENST00000371746 PCSK9Q8NBP7 692 aaKnown RBP24.78■■□□□ 1.56
LHX3-201ENST00000371746 FAM149B1Q96BN6 582 aa24.78■■□□□ 1.56
LHX3-201ENST00000371746 RNF157Q96PX1 679 aa24.78■■□□□ 1.56
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms