RNA–Protein interactions for RNA: ENST00000371447.3

PDE6C-201, Transcript of phosphodiesterase 6C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDE6C, Length 3,307 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6C-201ENST00000371447 ARID2Q68CP9 1835 aa12.27□□□□□ -0.45
PDE6C-201ENST00000371447 PAPSS1O43252 624 aaPredicted RBP12.27□□□□□ -0.45
PDE6C-201ENST00000371447 ZBED1O96006 694 aa12.27□□□□□ -0.45
PDE6C-201ENST00000371447 PAEPP09466 180 aa12.27□□□□□ -0.45
PDE6C-201ENST00000371447 GNL1P36915 607 aaPredicted RBP12.27□□□□□ -0.45
PDE6C-201ENST00000371447 ELK3P41970 407 aa12.27□□□□□ -0.45
PDE6C-201ENST00000371447 PITX1P78337 314 aaPredicted RBP12.27□□□□□ -0.45
PDE6C-201ENST00000371447 TAP1Q03518 808 aa12.27□□□□□ -0.45
PDE6C-201ENST00000371447 ZNF268Q14587 947 aaPredicted RBP12.27□□□□□ -0.45
PDE6C-201ENST00000371447 HHATQ5VTY9 493 aa12.27□□□□□ -0.45
PDE6C-201ENST00000371447 CEP57Q86XR8 500 aa12.27□□□□□ -0.45
PDE6C-201ENST00000371447 PDIK1LQ8N165 341 aa12.27□□□□□ -0.45
PDE6C-201ENST00000371447 PRCCQ92733 491 aaPredicted RBP12.27□□□□□ -0.45
PDE6C-201ENST00000371447 PITPNM3Q9BZ71 974 aa12.27□□□□□ -0.45
PDE6C-201ENST00000371447 DCTN4Q9UJW0 460 aa12.27□□□□□ -0.45
PDE6C-201ENST00000371447 IKBKGQ9Y6K9 419 aa12.27□□□□□ -0.45
PDE6C-201ENST00000371447 FGFR1P11362 822 aa12.26□□□□□ -0.45
PDE6C-201ENST00000371447 ATP5DP30049 168 aa12.26□□□□□ -0.45
PDE6C-201ENST00000371447 FOXN2P32314 431 aa12.26□□□□□ -0.45
PDE6C-201ENST00000371447 NDUFV1P49821 464 aa12.26□□□□□ -0.45
PDE6C-201ENST00000371447 ARL4CP56559 192 aa12.26□□□□□ -0.45
PDE6C-201ENST00000371447 GPX6P59796 221 aa12.26□□□□□ -0.45
PDE6C-201ENST00000371447 GBE1Q04446 702 aa12.26□□□□□ -0.45
PDE6C-201ENST00000371447 SOWAHAQ2M3V2 549 aa12.26□□□□□ -0.45
PDE6C-201ENST00000371447 DCAF6Q58WW2 860 aa12.26□□□□□ -0.45
PDE6C-201ENST00000371447 C2orf69Q8N8R5 385 aa12.26□□□□□ -0.45
PDE6C-201ENST00000371447 CCDC63Q8NA47 563 aa12.26□□□□□ -0.45
PDE6C-201ENST00000371447 BEST2Q8NFU1 509 aa12.26□□□□□ -0.45
PDE6C-201ENST00000371447 CNPY3Q9BT09 278 aa12.26□□□□□ -0.45
PDE6C-201ENST00000371447 SNRNP25Q9BV90 132 aaKnown RBP12.26□□□□□ -0.45
PDE6C-201ENST00000371447 LHX5Q9H2C1 402 aa12.26□□□□□ -0.45
PDE6C-201ENST00000371447 DOCK3Q8IZD9 2030 aa12.26□□□□□ -0.45
PDE6C-201ENST00000371447 CCDC78A2IDD5 438 aa12.26□□□□□ -0.45
PDE6C-201ENST00000371447 PGK1P00558 417 aa12.26□□□□□ -0.45
PDE6C-201ENST00000371447 PFKMP08237 780 aa12.26□□□□□ -0.45
PDE6C-201ENST00000371447 GBP2P32456 591 aaPredicted RBP12.26□□□□□ -0.45
PDE6C-201ENST00000371447 ZNF143P52747 638 aaPredicted RBP12.26□□□□□ -0.45
PDE6C-201ENST00000371447 SOX4Q06945 474 aaPredicted RBP12.26□□□□□ -0.45
PDE6C-201ENST00000371447 STAT4Q14765 748 aa12.26□□□□□ -0.45
PDE6C-201ENST00000371447 TAF1CQ15572 869 aaPredicted RBP12.26□□□□□ -0.45
PDE6C-201ENST00000371447 SLC27A1Q6PCB7 646 aa12.26□□□□□ -0.45
PDE6C-201ENST00000371447 NME8Q8N427 588 aa12.26□□□□□ -0.45
PDE6C-201ENST00000371447 PPM1NQ8N819 430 aa12.26□□□□□ -0.45
PDE6C-201ENST00000371447 CCNYQ8ND76 341 aa12.26□□□□□ -0.45
PDE6C-201ENST00000371447 SLC35B2Q8TB61 432 aa12.26□□□□□ -0.45
PDE6C-201ENST00000371447 TBC1D31Q96DN5 1066 aa12.26□□□□□ -0.45
PDE6C-201ENST00000371447 PCDH9Q9HC56 1237 aa12.26□□□□□ -0.45
PDE6C-201ENST00000371447 UBOX5O94941 541 aa12.26□□□□□ -0.45
PDE6C-201ENST00000371447 AMPD1P23109 780 aa12.26□□□□□ -0.45
PDE6C-201ENST00000371447 SCTRP47872 440 aa12.26□□□□□ -0.45
PDE6C-201ENST00000371447 MCCD1P59942 119 aaPredicted RBP12.26□□□□□ -0.45
PDE6C-201ENST00000371447 DPYSL3Q14195 570 aa12.26□□□□□ -0.45
PDE6C-201ENST00000371447 EMC10Q5UCC4 262 aa12.26□□□□□ -0.45
PDE6C-201ENST00000371447 NOTUMQ6P988 496 aa12.26□□□□□ -0.45
PDE6C-201ENST00000371447 BBS12Q6ZW61 710 aa12.26□□□□□ -0.45
PDE6C-201ENST00000371447 CXorf38Q8TB03 319 aa12.26□□□□□ -0.45
PDE6C-201ENST00000371447 NSRP1Q9H0G5 558 aaKnown RBP12.26□□□□□ -0.45
PDE6C-201ENST00000371447 IL1RAPL1Q9NZN1 696 aa12.26□□□□□ -0.45
PDE6C-201ENST00000371447 BAIAP2L1Q9UHR4 511 aa12.26□□□□□ -0.45
PDE6C-201ENST00000371447 ITGA11Q9UKX5 1188 aa12.26□□□□□ -0.45
PDE6C-201ENST00000371447 MYO18AQ92614 2054 aaKnown RBP12.25□□□□□ -0.45
PDE6C-201ENST00000371447 SMIM28A0A1B0GU29 152 aa12.25□□□□□ -0.45
PDE6C-201ENST00000371447 IQCA1LA6NCM1 817 aa12.25□□□□□ -0.45
PDE6C-201ENST00000371447 C2CD4BA6NLJ0 364 aa12.25□□□□□ -0.45
PDE6C-201ENST00000371447 CCT8L1PA6NM43 557 aa12.25□□□□□ -0.45
PDE6C-201ENST00000371447 HNRNPH1P31943 449 aaKnown RBP12.25□□□□□ -0.45
PDE6C-201ENST00000371447 GRIA1P42261 906 aa12.25□□□□□ -0.45
PDE6C-201ENST00000371447 MSH2P43246 934 aa12.25□□□□□ -0.45
PDE6C-201ENST00000371447 ZNF157P51786 506 aaPredicted RBP12.25□□□□□ -0.45
PDE6C-201ENST00000371447 WDR4P57081 412 aaKnown RBP12.25□□□□□ -0.45
PDE6C-201ENST00000371447 ENPEPQ07075 957 aa12.25□□□□□ -0.45
PDE6C-201ENST00000371447 PPP2R5DQ14738 602 aa12.25□□□□□ -0.45
PDE6C-201ENST00000371447 E2F5Q15329 346 aa12.25□□□□□ -0.45
PDE6C-201ENST00000371447 SLC1A5Q15758 541 aa12.25□□□□□ -0.45
PDE6C-201ENST00000371447 ANKRD20A8PQ5CZ79 823 aa12.25□□□□□ -0.45
PDE6C-201ENST00000371447 LRRC38Q5VT99 294 aa12.25□□□□□ -0.45
PDE6C-201ENST00000371447 PPIL6Q8IXY8 311 aa12.25□□□□□ -0.45
PDE6C-201ENST00000371447 ZC3H15Q8WU90 426 aaKnown RBP12.25□□□□□ -0.45
PDE6C-201ENST00000371447 SLC13A1Q9BZW2 595 aa12.25□□□□□ -0.45
PDE6C-201ENST00000371447 CD248Q9HCU0 757 aa12.25□□□□□ -0.45
PDE6C-201ENST00000371447 SLC5A4Q9NY91 659 aa12.25□□□□□ -0.45
PDE6C-201ENST00000371447 WDR35Q9P2L0 1181 aa12.25□□□□□ -0.45
PDE6C-201ENST00000371447 A6NJR5 290 aa12.25□□□□□ -0.45
PDE6C-201ENST00000371447 STRNO43815 780 aa12.25□□□□□ -0.45
PDE6C-201ENST00000371447 GABBR2O75899 941 aa12.25□□□□□ -0.45
PDE6C-201ENST00000371447 ITGAVP06756 1048 aa12.25□□□□□ -0.45
PDE6C-201ENST00000371447 RDXP35241 583 aaKnown RBP12.25□□□□□ -0.45
PDE6C-201ENST00000371447 BMPR2Q13873 1038 aa12.25□□□□□ -0.45
PDE6C-201ENST00000371447 MFSD10Q14728 455 aa12.25□□□□□ -0.45
PDE6C-201ENST00000371447 MORF4L2Q15014 288 aa12.25□□□□□ -0.45
PDE6C-201ENST00000371447 FBXO47Q5MNV8 452 aa12.25□□□□□ -0.45
PDE6C-201ENST00000371447 CXCL17Q6UXB2 119 aa12.25□□□□□ -0.45
PDE6C-201ENST00000371447 ARHGEF18Q6ZSZ5 1173 aa12.25□□□□□ -0.45
PDE6C-201ENST00000371447 ARRDC4Q8NCT1 418 aa12.25□□□□□ -0.45
PDE6C-201ENST00000371447 PAFAH2Q99487 392 aa12.25□□□□□ -0.45
PDE6C-201ENST00000371447 INPP5FQ9Y2H2 1132 aa12.25□□□□□ -0.45
PDE6C-201ENST00000371447 TTLL3Q9Y4R7 772 aa12.25□□□□□ -0.45
PDE6C-201ENST00000371447 SCN1AP35498 2009 aa12.25□□□□□ -0.45
PDE6C-201ENST00000371447 FAM47DPA6NHR8 397 aa12.24□□□□□ -0.45
PDE6C-201ENST00000371447 KPNA7A9QM74 516 aa12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms