RNA–Protein interactions for RNA: ENST00000368662.9

TUBE1-202, Transcript of tubulin epsilon 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TUBE1, Length 2,142 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBE1-202ENST00000368662 TNFRSF10BO14763 440 aa12.92□□□□□ -0.34
TUBE1-202ENST00000368662 TEX28O15482 410 aa12.92□□□□□ -0.34
TUBE1-202ENST00000368662 RTN3O95197 1032 aaPredicted RBP12.92□□□□□ -0.34
TUBE1-202ENST00000368662 MEI1Q5TIA1 1274 aa12.92□□□□□ -0.34
TUBE1-202ENST00000368662 PM20D1Q6GTS8 502 aa12.92□□□□□ -0.34
TUBE1-202ENST00000368662 NIPA2Q8N8Q9 360 aa12.92□□□□□ -0.34
TUBE1-202ENST00000368662 GOLGA1Q92805 767 aa12.92□□□□□ -0.34
TUBE1-202ENST00000368662 ULBP1Q9BZM6 244 aa12.92□□□□□ -0.34
TUBE1-202ENST00000368662 EHD2Q9NZN4 543 aa12.92□□□□□ -0.34
TUBE1-202ENST00000368662 MTUS1Q9ULD2 1270 aa12.92□□□□□ -0.34
TUBE1-202ENST00000368662 YBX2Q9Y2T7 364 aaKnown RBP12.92□□□□□ -0.34
TUBE1-202ENST00000368662 ALG6Q9Y672 507 aa12.92□□□□□ -0.34
TUBE1-202ENST00000368662 MIF4GDA9UHW6 222 aaKnown RBP12.92□□□□□ -0.34
TUBE1-202ENST00000368662 VNN2O95498 520 aa12.92□□□□□ -0.34
TUBE1-202ENST00000368662 C1RP00736 705 aa12.92□□□□□ -0.34
TUBE1-202ENST00000368662 ELF1P32519 619 aa12.92□□□□□ -0.34
TUBE1-202ENST00000368662 DAOAP59103 153 aa12.92□□□□□ -0.34
TUBE1-202ENST00000368662 YWHAZP63104 245 aaKnown RBP12.92□□□□□ -0.34
TUBE1-202ENST00000368662 DDR2Q16832 855 aa12.92□□□□□ -0.34
TUBE1-202ENST00000368662 DENND5BQ6ZUT9 1274 aa12.92□□□□□ -0.34
TUBE1-202ENST00000368662 GPRIN1Q7Z2K8 1008 aa12.92□□□□□ -0.34
TUBE1-202ENST00000368662 MRPL43Q8N983 215 aaKnown RBP12.92□□□□□ -0.34
TUBE1-202ENST00000368662 AUTS2Q8WXX7 1259 aa12.92□□□□□ -0.34
TUBE1-202ENST00000368662 PIWIL1Q96J94 861 aaKnown RBP12.92□□□□□ -0.34
TUBE1-202ENST00000368662 NCAPGQ9BPX3 1015 aa12.92□□□□□ -0.34
TUBE1-202ENST00000368662 LAMA3Q16787 3333 aa12.91□□□□□ -0.34
TUBE1-202ENST00000368662 C2CD4BA6NLJ0 364 aa12.91□□□□□ -0.34
TUBE1-202ENST00000368662 H3BNC9 293 aa12.91□□□□□ -0.34
TUBE1-202ENST00000368662 SPOPO43791 374 aa12.91□□□□□ -0.34
TUBE1-202ENST00000368662 GJB6O95452 261 aa12.91□□□□□ -0.34
TUBE1-202ENST00000368662 FTCDO95954 541 aa12.91□□□□□ -0.34
TUBE1-202ENST00000368662 CNPP09543 421 aaKnown RBP12.91□□□□□ -0.34
TUBE1-202ENST00000368662 PDGFRAP16234 1089 aa12.91□□□□□ -0.34
TUBE1-202ENST00000368662 GPD1P21695 349 aa12.91□□□□□ -0.34
TUBE1-202ENST00000368662 ZNF143P52747 638 aaPredicted RBP12.91□□□□□ -0.34
TUBE1-202ENST00000368662 RNASE9P60153 205 aaKnown RBP12.91□□□□□ -0.34
TUBE1-202ENST00000368662 ERVFC1P60507 584 aa12.91□□□□□ -0.34
TUBE1-202ENST00000368662 PPP2R2DQ66LE6 453 aa12.91□□□□□ -0.34
TUBE1-202ENST00000368662 NT5DC3Q86UY8 548 aa12.91□□□□□ -0.34
TUBE1-202ENST00000368662 TCEAL8Q8IYN2 117 aa12.91□□□□□ -0.34
TUBE1-202ENST00000368662 JOSD2Q8TAC2 188 aa12.91□□□□□ -0.34
TUBE1-202ENST00000368662 CLEC4CQ8WTT0 213 aa12.91□□□□□ -0.34
TUBE1-202ENST00000368662 FAM149B1Q96BN6 582 aa12.91□□□□□ -0.34
TUBE1-202ENST00000368662 BTBD6Q96KE9 485 aa12.91□□□□□ -0.34
TUBE1-202ENST00000368662 CNPY3Q9BT09 278 aa12.91□□□□□ -0.34
TUBE1-202ENST00000368662 TRIM7Q9C029 511 aa12.91□□□□□ -0.34
TUBE1-202ENST00000368662 SLC28A3Q9HAS3 691 aa12.91□□□□□ -0.34
TUBE1-202ENST00000368662 CYP4F11Q9HBI6 524 aa12.91□□□□□ -0.34
TUBE1-202ENST00000368662 POPDC2Q9HBU9 364 aa12.91□□□□□ -0.34
TUBE1-202ENST00000368662 RRAGDQ9NQL2 400 aaPredicted RBP12.91□□□□□ -0.34
TUBE1-202ENST00000368662 SLC27A5Q9Y2P5 690 aa12.91□□□□□ -0.34
TUBE1-202ENST00000368662 PLXNA4Q9HCM2 1894 aa12.91□□□□□ -0.34
TUBE1-202ENST00000368662 PATJQ8NI35 1801 aa12.91□□□□□ -0.34
TUBE1-202ENST00000368662 C2orf71A6NGG8 1288 aa12.91□□□□□ -0.34
TUBE1-202ENST00000368662 TMEM110-MUSTN1A8MSY1 372 aa12.91□□□□□ -0.34
TUBE1-202ENST00000368662 ENC1O14682 589 aa12.91□□□□□ -0.34
TUBE1-202ENST00000368662 FSCN2O14926 492 aa12.91□□□□□ -0.34
TUBE1-202ENST00000368662 ARHGEF15O94989 841 aa12.91□□□□□ -0.34
TUBE1-202ENST00000368662 USP17L7P0C7H9 530 aa12.91□□□□□ -0.34
TUBE1-202ENST00000368662 COMTP21964 271 aa12.91□□□□□ -0.34
TUBE1-202ENST00000368662 PSMA2P25787 234 aa12.91□□□□□ -0.34
TUBE1-202ENST00000368662 SDC4P31431 198 aa12.91□□□□□ -0.34
TUBE1-202ENST00000368662 PBX2P40425 430 aa12.91□□□□□ -0.34
TUBE1-202ENST00000368662 ALDH1A3P47895 512 aa12.91□□□□□ -0.34
TUBE1-202ENST00000368662 PLD1Q13393 1074 aa12.91□□□□□ -0.34
TUBE1-202ENST00000368662 GPM6BQ13491 265 aa12.91□□□□□ -0.34
TUBE1-202ENST00000368662 TUBB2AQ13885 445 aa12.91□□□□□ -0.34
TUBE1-202ENST00000368662 RPS6KA1Q15418 735 aa12.91□□□□□ -0.34
TUBE1-202ENST00000368662 PAPD7Q5XG87 772 aaKnown RBP12.91□□□□□ -0.34
TUBE1-202ENST00000368662 BEND5Q7L4P6 421 aa12.91□□□□□ -0.34
TUBE1-202ENST00000368662 ARHGAP18Q8N392 663 aa12.91□□□□□ -0.34
TUBE1-202ENST00000368662 TTC9BQ8N6N2 239 aa12.91□□□□□ -0.34
TUBE1-202ENST00000368662 UBL4BQ8N7F7 174 aa12.91□□□□□ -0.34
TUBE1-202ENST00000368662 MICAL1Q8TDZ2 1067 aa12.91□□□□□ -0.34
TUBE1-202ENST00000368662 KLHL5Q96PQ7 755 aa12.91□□□□□ -0.34
TUBE1-202ENST00000368662 TUBB2BQ9BVA1 445 aa12.91□□□□□ -0.34
TUBE1-202ENST00000368662 CRISPLD1Q9H336 500 aa12.91□□□□□ -0.34
TUBE1-202ENST00000368662 RRN3Q9NYV6 651 aa12.91□□□□□ -0.34
TUBE1-202ENST00000368662 IL37Q9NZH6 218 aa12.91□□□□□ -0.34
TUBE1-202ENST00000368662 PDE4DIPQ5VU43 2346 aa12.9□□□□□ -0.34
TUBE1-202ENST00000368662 FAM92AA1XBS5 289 aa12.9□□□□□ -0.34
TUBE1-202ENST00000368662 CCDC66A2RUB6 948 aa12.9□□□□□ -0.34
TUBE1-202ENST00000368662 DPYSL4O14531 572 aa12.9□□□□□ -0.34
TUBE1-202ENST00000368662 PRRG1O14668 218 aa12.9□□□□□ -0.34
TUBE1-202ENST00000368662 FANCGO15287 622 aa12.9□□□□□ -0.34
TUBE1-202ENST00000368662 DAB1O75553 588 aa12.9□□□□□ -0.34
TUBE1-202ENST00000368662 RNF8O76064 485 aa12.9□□□□□ -0.34
TUBE1-202ENST00000368662 ATP1A1P05023 1023 aaKnown RBP12.9□□□□□ -0.34
TUBE1-202ENST00000368662 PRLRP16471 622 aa12.9□□□□□ -0.34
TUBE1-202ENST00000368662 KLRC2P26717 231 aa12.9□□□□□ -0.34
TUBE1-202ENST00000368662 FLT3P36888 993 aa12.9□□□□□ -0.34
TUBE1-202ENST00000368662 MATKP42679 507 aa12.9□□□□□ -0.34
TUBE1-202ENST00000368662 PTPN9P43378 593 aa12.9□□□□□ -0.34
TUBE1-202ENST00000368662 PLPP4Q5VZY2 271 aa12.9□□□□□ -0.34
TUBE1-202ENST00000368662 RTL10Q7L3V2 364 aa12.9□□□□□ -0.34
TUBE1-202ENST00000368662 EMC1Q8N766 993 aa12.9□□□□□ -0.34
TUBE1-202ENST00000368662 SCAMP5Q8TAC9 235 aa12.9□□□□□ -0.34
TUBE1-202ENST00000368662 RXFP2Q8WXD0 754 aa12.9□□□□□ -0.34
TUBE1-202ENST00000368662 KHSRPQ92945 711 aaKnown RBP eCLIP12.9□□□□□ -0.341e-16■■■□□ 16
TUBE1-202ENST00000368662 HES6Q96HZ4 224 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms