RNA–Protein interactions for RNA: ENST00000368010.3

PFDN2-201, Transcript of prefoldin subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PFDN2, Length 677 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN2-201ENST00000368010 UBR7Q8N806 425 aa25.27■■□□□ 1.64
PFDN2-201ENST00000368010 EHBP1Q8NDI1 1231 aa25.27■■□□□ 1.64
PFDN2-201ENST00000368010 LMO3Q8TAP4 145 aa25.27■■□□□ 1.64
PFDN2-201ENST00000368010 OSCP1Q8WVF1 389 aa25.27■■□□□ 1.64
PFDN2-201ENST00000368010 DUS2Q9NX74 493 aaKnown RBP25.27■■□□□ 1.64
PFDN2-201ENST00000368010 CPQQ9Y646 472 aa25.27■■□□□ 1.64
PFDN2-201ENST00000368010 WNT6Q9Y6F9 365 aa25.27■■□□□ 1.64
PFDN2-201ENST00000368010 LEFTY2O00292 366 aa25.26■■□□□ 1.63
PFDN2-201ENST00000368010 ZDHHC11BP0C7U3 371 aa25.26■■□□□ 1.63
PFDN2-201ENST00000368010 MBL2P11226 248 aaPredicted RBP25.26■■□□□ 1.63
PFDN2-201ENST00000368010 ARSAP15289 507 aa25.26■■□□□ 1.63
PFDN2-201ENST00000368010 ACO1P21399 889 aaKnown RBP25.26■■□□□ 1.63
PFDN2-201ENST00000368010 C1orf210Q8IVY1 113 aa25.26■■□□□ 1.63
PFDN2-201ENST00000368010 TLR8Q9NR97 1041 aaKnown RBP25.26■■□□□ 1.63
PFDN2-201ENST00000368010 FAM86C1Q9NVL1 165 aa25.26■■□□□ 1.63
PFDN2-201ENST00000368010 SPATA6Q9NWH7 488 aaPredicted RBP25.26■■□□□ 1.63
PFDN2-201ENST00000368010 SMPD4Q9NXE4 827 aa25.26■■□□□ 1.63
PFDN2-201ENST00000368010 SCML2Q9UQR0 700 aa25.26■■□□□ 1.63
PFDN2-201ENST00000368010 COCHO43405 550 aa25.25■■□□□ 1.63
PFDN2-201ENST00000368010 CD19P15391 556 aa25.25■■□□□ 1.63
PFDN2-201ENST00000368010 ERCC5P28715 1186 aaPredicted RBP25.25■■□□□ 1.63
PFDN2-201ENST00000368010 SLC8A3P57103 927 aa25.25■■□□□ 1.63
PFDN2-201ENST00000368010 ZXDBP98169 803 aa25.25■■□□□ 1.63
PFDN2-201ENST00000368010 FZD5Q13467 585 aa25.25■■□□□ 1.63
PFDN2-201ENST00000368010 SGO2Q562F6 1265 aa25.25■■□□□ 1.63
PFDN2-201ENST00000368010 TXNDC11Q6PKC3 985 aa25.25■■□□□ 1.63
PFDN2-201ENST00000368010 DDX42Q86XP3 938 aaKnown RBP eCLIP25.25■■□□□ 1.63
PFDN2-201ENST00000368010 CPA6Q8N4T0 437 aa25.25■■□□□ 1.63
PFDN2-201ENST00000368010 GPT2Q8TD30 523 aa25.25■■□□□ 1.63
PFDN2-201ENST00000368010 F5P12259 2224 aa25.24■■□□□ 1.63
PFDN2-201ENST00000368010 PATJQ8NI35 1801 aa25.24■■□□□ 1.63
PFDN2-201ENST00000368010 AMPD2Q01433 879 aa25.24■■□□□ 1.63
PFDN2-201ENST00000368010 GCNT1Q02742 428 aa25.24■■□□□ 1.63
PFDN2-201ENST00000368010 LRRC32Q14392 662 aa25.24■■□□□ 1.63
PFDN2-201ENST00000368010 GOLGA7BQ2TAP0 167 aa25.24■■□□□ 1.63
PFDN2-201ENST00000368010 TMEM270Q6UE05 265 aa25.24■■□□□ 1.63
PFDN2-201ENST00000368010 KIAA1958Q8N8K9 716 aa25.24■■□□□ 1.63
PFDN2-201ENST00000368010 ANKRD52Q8NB46 1076 aa25.24■■□□□ 1.63
PFDN2-201ENST00000368010 KAT5Q92993 513 aa25.24■■□□□ 1.63
PFDN2-201ENST00000368010 ATP2A3Q93084 1043 aa25.24■■□□□ 1.63
PFDN2-201ENST00000368010 NACA2Q9H009 215 aa25.24■■□□□ 1.63
PFDN2-201ENST00000368010 INTS2Q9H0H0 1204 aaKnown RBP25.24■■□□□ 1.63
PFDN2-201ENST00000368010 CCSER2Q9H7U1 834 aa25.24■■□□□ 1.63
PFDN2-201ENST00000368010 LMAN1LQ9HAT1 526 aa25.24■■□□□ 1.63
PFDN2-201ENST00000368010 TSPAN16Q9UKR8 245 aa25.24■■□□□ 1.63
PFDN2-201ENST00000368010 KIAA1257Q9ULG3 409 aa25.24■■□□□ 1.63
PFDN2-201ENST00000368010 PCDHB4Q9Y5E5 795 aa25.24■■□□□ 1.63
PFDN2-201ENST00000368010 CACNA1HO95180 2353 aa25.24■■□□□ 1.63
PFDN2-201ENST00000368010 WDFY4Q6ZS81 3184 aa25.23■■□□□ 1.63
PFDN2-201ENST00000368010 CYP26A1O43174 497 aa25.23■■□□□ 1.63
PFDN2-201ENST00000368010 CHRNB1P11230 501 aa25.23■■□□□ 1.63
PFDN2-201ENST00000368010 VDRP11473 427 aa25.23■■□□□ 1.63
PFDN2-201ENST00000368010 KIF11P52732 1056 aa25.23■■□□□ 1.63
PFDN2-201ENST00000368010 EML3Q32P44 896 aa25.23■■□□□ 1.63
PFDN2-201ENST00000368010 RRAGAQ7L523 313 aa25.23■■□□□ 1.63
PFDN2-201ENST00000368010 IRF2BP1Q8IU81 584 aa25.23■■□□□ 1.63
PFDN2-201ENST00000368010 ARHGEF19Q8IW93 802 aa25.23■■□□□ 1.63
PFDN2-201ENST00000368010 FAM114A1Q8IWE2 563 aa25.23■■□□□ 1.63
PFDN2-201ENST00000368010 IER2Q9BTL4 223 aa25.23■■□□□ 1.63
PFDN2-201ENST00000368010 UBXN6Q9BZV1 441 aa25.23■■□□□ 1.63
PFDN2-201ENST00000368010 CHRDQ9H2X0 955 aa25.23■■□□□ 1.63
PFDN2-201ENST00000368010 THAP9Q9H5L6 903 aa25.23■■□□□ 1.63
PFDN2-201ENST00000368010 ECT2Q9H8V3 914 aa25.23■■□□□ 1.63
PFDN2-201ENST00000368010 HESX1Q9UBX0 185 aa25.23■■□□□ 1.63
PFDN2-201ENST00000368010 HELZP42694 1942 aaKnown RBP25.22■■□□□ 1.63
PFDN2-201ENST00000368010 OTOL1A6NHN0 477 aaPredicted RBP25.22■■□□□ 1.63
PFDN2-201ENST00000368010 LAMTOR5O43504 91 aa25.22■■□□□ 1.63
PFDN2-201ENST00000368010 TLR5O60602 858 aa25.22■■□□□ 1.63
PFDN2-201ENST00000368010 PAEPP09466 180 aa25.22■■□□□ 1.63
PFDN2-201ENST00000368010 MTIF2P46199 727 aaKnown RBP25.22■■□□□ 1.63
PFDN2-201ENST00000368010 BCAT1P54687 386 aa25.22■■□□□ 1.63
PFDN2-201ENST00000368010 PON2Q15165 354 aa25.22■■□□□ 1.63
PFDN2-201ENST00000368010 CT47A1Q5JQC4 288 aaPredicted RBP25.22■■□□□ 1.63
PFDN2-201ENST00000368010 PIGZQ86VD9 579 aa25.22■■□□□ 1.63
PFDN2-201ENST00000368010 TTC30AQ86WT1 665 aa25.22■■□□□ 1.63
PFDN2-201ENST00000368010 CFAP97Q9P2B7 532 aa25.22■■□□□ 1.63
PFDN2-201ENST00000368010 MYH10P35580 1976 aa25.22■■□□□ 1.63
PFDN2-201ENST00000368010 SLC9A3R1O14745 358 aaPredicted RBP25.21■■□□□ 1.63
PFDN2-201ENST00000368010 NFATC1O95644 943 aa25.21■■□□□ 1.63
PFDN2-201ENST00000368010 DGKKQ5KSL6 1271 aa25.21■■□□□ 1.63
PFDN2-201ENST00000368010 CCDC186Q7Z3E2 898 aa25.21■■□□□ 1.63
PFDN2-201ENST00000368010 PHOX2BQ99453 314 aa25.21■■□□□ 1.63
PFDN2-201ENST00000368010 CYLDQ9NQC7 956 aa25.21■■□□□ 1.63
PFDN2-201ENST00000368010 USP3Q9Y6I4 520 aa25.21■■□□□ 1.63
PFDN2-201ENST00000368010 O00370 1275 aa25.2■■□□□ 1.62
PFDN2-201ENST00000368010 GJA4P35212 333 aa25.2■■□□□ 1.62
PFDN2-201ENST00000368010 PGFP49763 221 aa25.2■■□□□ 1.62
PFDN2-201ENST00000368010 PSEN1P49768 467 aa25.2■■□□□ 1.62
PFDN2-201ENST00000368010 PDE4CQ08493 712 aa25.2■■□□□ 1.62
PFDN2-201ENST00000368010 NR1H3Q13133 447 aa25.2■■□□□ 1.62
PFDN2-201ENST00000368010 RBBP8NLQ8NC74 664 aaPredicted RBP25.2■■□□□ 1.62
PFDN2-201ENST00000368010 EXOC4Q96A65 974 aa25.2■■□□□ 1.62
PFDN2-201ENST00000368010 ZFRQ96KR1 1074 aaKnown RBP25.2■■□□□ 1.62
PFDN2-201ENST00000368010 LINC00597Q9H2U6 94 aa25.2■■□□□ 1.62
PFDN2-201ENST00000368010 NMUR1Q9HB89 426 aa25.2■■□□□ 1.62
PFDN2-201ENST00000368010 A0A1W2PQH9 124 aa25.19■■□□□ 1.62
PFDN2-201ENST00000368010 XPO1O14980 1071 aaKnown RBP25.19■■□□□ 1.62
PFDN2-201ENST00000368010 MBD3O95983 291 aa25.19■■□□□ 1.62
PFDN2-201ENST00000368010 BST2Q10589 180 aaKnown RBP25.19■■□□□ 1.62
PFDN2-201ENST00000368010 MTAPQ13126 283 aa25.19■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms