RNA–Protein interactions for RNA: ENST00000366735.5

MRPL55-209, Transcript of mitochondrial ribosomal protein L55, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MRPL55, Length 1,212 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-209ENST00000366735 A0A1B0GVL5 298 aa13.19□□□□□ -0.3
MRPL55-209ENST00000366735 SYCE3A1L190 88 aa13.19□□□□□ -0.3
MRPL55-209ENST00000366735 TM4SF5O14894 197 aa13.19□□□□□ -0.3
MRPL55-209ENST00000366735 TACC1O75410 805 aa13.19□□□□□ -0.3
MRPL55-209ENST00000366735 RTN3O95197 1032 aaPredicted RBP13.19□□□□□ -0.3
MRPL55-209ENST00000366735 KCNK5O95279 499 aa13.19□□□□□ -0.3
MRPL55-209ENST00000366735 ABL1P00519 1130 aa13.19□□□□□ -0.3
MRPL55-209ENST00000366735 DLATP10515 647 aaKnown RBP13.19□□□□□ -0.3
MRPL55-209ENST00000366735 TRIM21P19474 475 aaKnown RBP13.19□□□□□ -0.3
MRPL55-209ENST00000366735 HOXC13P31276 330 aa13.19□□□□□ -0.3
MRPL55-209ENST00000366735 GNL1P36915 607 aaPredicted RBP13.19□□□□□ -0.3
MRPL55-209ENST00000366735 NOVA1P51513 510 aaKnown RBP13.19□□□□□ -0.3
MRPL55-209ENST00000366735 SEC13P55735 322 aa13.19□□□□□ -0.3
MRPL55-209ENST00000366735 ASIC1P78348 528 aa13.19□□□□□ -0.3
MRPL55-209ENST00000366735 TRPC3Q13507 836 aa13.19□□□□□ -0.3
MRPL55-209ENST00000366735 SNRNP35Q16560 246 aaKnown RBP13.19□□□□□ -0.3
MRPL55-209ENST00000366735 CCDC142Q17RM4 750 aa13.19□□□□□ -0.3
MRPL55-209ENST00000366735 C2orf27AQ580R0 203 aa13.19□□□□□ -0.3
MRPL55-209ENST00000366735 MDH1BQ5I0G3 518 aa13.19□□□□□ -0.3
MRPL55-209ENST00000366735 NAIF1Q69YI7 327 aaPredicted RBP13.19□□□□□ -0.3
MRPL55-209ENST00000366735 ANO7Q6IWH7 933 aa13.19□□□□□ -0.3
MRPL55-209ENST00000366735 NUDT18Q6ZVK8 323 aa13.19□□□□□ -0.3
MRPL55-209ENST00000366735 TRAPPC11Q7Z392 1133 aa13.19□□□□□ -0.3
MRPL55-209ENST00000366735 LIMS2Q7Z4I7 341 aa13.19□□□□□ -0.3
MRPL55-209ENST00000366735 FILIP1Q7Z7B0 1213 aa13.19□□□□□ -0.3
MRPL55-209ENST00000366735 RASSF3Q86WH2 238 aa13.19□□□□□ -0.3
MRPL55-209ENST00000366735 CBWD2Q8IUF1 395 aa13.19□□□□□ -0.3
MRPL55-209ENST00000366735 ELOA2Q8IYF1 753 aaPredicted RBP13.19□□□□□ -0.3
MRPL55-209ENST00000366735 OR6B3Q8NGW1 331 aa13.19□□□□□ -0.3
MRPL55-209ENST00000366735 WHAMMQ8TF30 809 aa13.19□□□□□ -0.3
MRPL55-209ENST00000366735 OVCA2Q8WZ82 227 aa13.19□□□□□ -0.3
MRPL55-209ENST00000366735 CGRRF1Q99675 332 aa13.19□□□□□ -0.3
MRPL55-209ENST00000366735 FGFBP2Q9BYJ0 223 aa13.19□□□□□ -0.3
MRPL55-209ENST00000366735 TPSD1Q9BZJ3 242 aa13.19□□□□□ -0.3
MRPL55-209ENST00000366735 SMOC1Q9H4F8 434 aa13.19□□□□□ -0.3
MRPL55-209ENST00000366735 MAGEF1Q9HAY2 307 aa13.19□□□□□ -0.3
MRPL55-209ENST00000366735 TMEM9BQ9NQ34 198 aa13.19□□□□□ -0.3
MRPL55-209ENST00000366735 CPQQ9Y646 472 aa13.19□□□□□ -0.3
MRPL55-209ENST00000366735 PTPRJQ12913 1337 aa13.18□□□□□ -0.3
MRPL55-209ENST00000366735 ADAMTS9Q9P2N4 1935 aa13.18□□□□□ -0.3
MRPL55-209ENST00000366735 F8VP50 259 aa13.18□□□□□ -0.3
MRPL55-209ENST00000366735 HCRTO43612 131 aa13.18□□□□□ -0.3
MRPL55-209ENST00000366735 ATP2C2O75185 946 aa13.18□□□□□ -0.3
MRPL55-209ENST00000366735 CYP17A1P05093 508 aa13.18□□□□□ -0.3
MRPL55-209ENST00000366735 PDGFRBP09619 1106 aa13.18□□□□□ -0.3
MRPL55-209ENST00000366735 MBL2P11226 248 aaPredicted RBP13.18□□□□□ -0.3
MRPL55-209ENST00000366735 LMO2P25791 158 aa13.18□□□□□ -0.3
MRPL55-209ENST00000366735 ATICP31939 592 aa13.18□□□□□ -0.3
MRPL55-209ENST00000366735 CLCN1P35523 988 aa13.18□□□□□ -0.3
MRPL55-209ENST00000366735 OPRD1P41143 372 aa13.18□□□□□ -0.3
MRPL55-209ENST00000366735 SYKP43405 635 aa13.18□□□□□ -0.3
MRPL55-209ENST00000366735 CRY1Q16526 586 aa13.18□□□□□ -0.3
MRPL55-209ENST00000366735 EOGTQ5NDL2 527 aa13.18□□□□□ -0.3
MRPL55-209ENST00000366735 FAM26FQ5R3K3 315 aa13.18□□□□□ -0.3
MRPL55-209ENST00000366735 BTBD8Q5XKL5 378 aa13.18□□□□□ -0.3
MRPL55-209ENST00000366735 TCEAL6Q6IPX3 200 aa13.18□□□□□ -0.3
MRPL55-209ENST00000366735 PSAPL1Q6NUJ1 521 aa13.18□□□□□ -0.3
MRPL55-209ENST00000366735 TRMT11Q7Z4G4 463 aaKnown RBP13.18□□□□□ -0.3
MRPL55-209ENST00000366735 GAS2L3Q86XJ1 694 aa13.18□□□□□ -0.3
MRPL55-209ENST00000366735 IQUBQ8NA54 791 aa13.18□□□□□ -0.3
MRPL55-209ENST00000366735 XXYLT1Q8NBI6 393 aa13.18□□□□□ -0.3
MRPL55-209ENST00000366735 TCEAL3Q969E4 200 aa13.18□□□□□ -0.3
MRPL55-209ENST00000366735 OTUB2Q96DC9 234 aa13.18□□□□□ -0.3
MRPL55-209ENST00000366735 PNKPQ96T60 521 aa13.18□□□□□ -0.3
MRPL55-209ENST00000366735 PANK2Q9BZ23 570 aa13.18□□□□□ -0.3
MRPL55-209ENST00000366735 PLSCR2Q9NRY7 297 aa13.18□□□□□ -0.3
MRPL55-209ENST00000366735 RXFP3Q9NSD7 469 aa13.18□□□□□ -0.3
MRPL55-209ENST00000366735 FAM13BQ9NYF5 915 aa13.18□□□□□ -0.3
MRPL55-209ENST00000366735 BCCIPQ9P287 314 aaKnown RBP eCLIP13.18□□□□□ -0.3
MRPL55-209ENST00000366735 CGNQ9P2M7 1197 aaKnown RBP13.18□□□□□ -0.3
MRPL55-209ENST00000366735 LNP1A1A4G5 178 aa13.17□□□□□ -0.3
MRPL55-209ENST00000366735 ZNF840PA6NDX5 716 aa13.17□□□□□ -0.3
MRPL55-209ENST00000366735 GOLGA6L3A6NEY3 463 aa13.17□□□□□ -0.3
MRPL55-209ENST00000366735 A8MXQ7 604 aa13.17□□□□□ -0.3
MRPL55-209ENST00000366735 DCLK1O15075 740 aa13.17□□□□□ -0.3
MRPL55-209ENST00000366735 PHACTR2O75167 634 aa13.17□□□□□ -0.3
MRPL55-209ENST00000366735 ZNF202O95125 648 aa13.17□□□□□ -0.3
MRPL55-209ENST00000366735 STAU1O95793 577 aaKnown RBP13.17□□□□□ -0.3
MRPL55-209ENST00000366735 OLFM2O95897 454 aa13.17□□□□□ -0.3
MRPL55-209ENST00000366735 OAS1P00973 400 aaKnown RBP13.17□□□□□ -0.3
MRPL55-209ENST00000366735 ADH5P11766 374 aa13.17□□□□□ -0.3
MRPL55-209ENST00000366735 CD44P16070 742 aaKnown RBP13.17□□□□□ -0.3
MRPL55-209ENST00000366735 DHPSP49366 369 aaPredicted RBP13.17□□□□□ -0.3
MRPL55-209ENST00000366735 CYP24A1Q07973 514 aa13.17□□□□□ -0.3
MRPL55-209ENST00000366735 IFRD2Q12894 506 aaPredicted RBP13.17□□□□□ -0.3
MRPL55-209ENST00000366735 LMAN2Q12907 356 aa13.17□□□□□ -0.3
MRPL55-209ENST00000366735 PSMD6Q15008 389 aa13.17□□□□□ -0.3
MRPL55-209ENST00000366735 DHCR24Q15392 516 aa13.17□□□□□ -0.3
MRPL55-209ENST00000366735 WDR72Q3MJ13 1102 aa13.17□□□□□ -0.3
MRPL55-209ENST00000366735 LPCAT2Q7L5N7 544 aa13.17□□□□□ -0.3
MRPL55-209ENST00000366735 TTC30AQ86WT1 665 aa13.17□□□□□ -0.3
MRPL55-209ENST00000366735 NUP93Q8N1F7 819 aa13.17□□□□□ -0.3
MRPL55-209ENST00000366735 B3GALNT2Q8NCR0 500 aa13.17□□□□□ -0.3
MRPL55-209ENST00000366735 MDGA1Q8NFP4 955 aa13.17□□□□□ -0.3
MRPL55-209ENST00000366735 EZH1Q92800 747 aaPredicted RBP13.17□□□□□ -0.3
MRPL55-209ENST00000366735 FAM84AQ96KN4 292 aa13.17□□□□□ -0.3
MRPL55-209ENST00000366735 TNIP3Q96KP6 325 aa13.17□□□□□ -0.3
MRPL55-209ENST00000366735 FUCA2Q9BTY2 467 aa13.17□□□□□ -0.3
MRPL55-209ENST00000366735 TRIM9Q9C026 710 aa13.17□□□□□ -0.3
MRPL55-209ENST00000366735 LINC00597Q9H2U6 94 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 309.9 ms