RNA–Protein interactions for RNA: ENST00000364007.1

RNU6-560P-201, Transcript of RNA, U6 small nuclear 560, pseudogene, humanhuman

BASIC

Gene RNU6-560P, Length 108 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-560P-201ENST00000364007 EIF2AQ9BY44 585 aaKnown RBP5.08□□□□□ -1.6
RNU6-560P-201ENST00000364007 SLC25A32Q9H2D1 315 aa5.08□□□□□ -1.6
RNU6-560P-201ENST00000364007 PTPRHQ9HD43 1115 aa5.08□□□□□ -1.6
RNU6-560P-201ENST00000364007 ARHGEF3Q9NR81 526 aa5.08□□□□□ -1.6
RNU6-560P-201ENST00000364007 IGSF9Q9P2J2 1179 aa5.08□□□□□ -1.6
RNU6-560P-201ENST00000364007 DNAJB11Q9UBS4 358 aa5.08□□□□□ -1.6
RNU6-560P-201ENST00000364007 VPS51Q9UID3 782 aa5.08□□□□□ -1.6
RNU6-560P-201ENST00000364007 USP22Q9UPT9 525 aa5.08□□□□□ -1.6
RNU6-560P-201ENST00000364007 DRG1Q9Y295 367 aaKnown RBP5.08□□□□□ -1.6
RNU6-560P-201ENST00000364007 LINC00473A8K010 186 aa5.07□□□□□ -1.6
RNU6-560P-201ENST00000364007 HNRNPDLO14979 420 aaKnown RBP5.07□□□□□ -1.6
RNU6-560P-201ENST00000364007 COQ9O75208 318 aa5.07□□□□□ -1.6
RNU6-560P-201ENST00000364007 ARP10275 920 aa5.07□□□□□ -1.6
RNU6-560P-201ENST00000364007 GRIA3P42263 894 aa5.07□□□□□ -1.6
RNU6-560P-201ENST00000364007 GDF5P43026 501 aa5.07□□□□□ -1.6
RNU6-560P-201ENST00000364007 SIM1P81133 766 aaPredicted RBP5.07□□□□□ -1.6
RNU6-560P-201ENST00000364007 TIAL1Q01085 375 aaKnown RBP eCLIP5.07□□□□□ -1.6
RNU6-560P-201ENST00000364007 TNFAIP2Q03169 654 aa5.07□□□□□ -1.6
RNU6-560P-201ENST00000364007 GRM1Q13255 1194 aa5.07□□□□□ -1.6
RNU6-560P-201ENST00000364007 TRIM14Q14142 442 aa5.07□□□□□ -1.6
RNU6-560P-201ENST00000364007 TUBB8Q3ZCM7 444 aa5.07□□□□□ -1.6
RNU6-560P-201ENST00000364007 EEF1AKMT2Q5JPI9 291 aaKnown RBP5.07□□□□□ -1.6
RNU6-560P-201ENST00000364007 FAXCQ5TGI0 409 aa5.07□□□□□ -1.6
RNU6-560P-201ENST00000364007 CLEC9AQ6UXN8 241 aa5.07□□□□□ -1.6
RNU6-560P-201ENST00000364007 USP51Q70EK9 711 aa5.07□□□□□ -1.6
RNU6-560P-201ENST00000364007 METTL25Q8N6Q8 603 aa5.07□□□□□ -1.6
RNU6-560P-201ENST00000364007 ZNF527Q8NB42 609 aa5.07□□□□□ -1.6
RNU6-560P-201ENST00000364007 SLC16A11Q8NCK7 471 aa5.07□□□□□ -1.6
RNU6-560P-201ENST00000364007 PDLIM2Q96JY6 352 aa5.07□□□□□ -1.6
RNU6-560P-201ENST00000364007 PRRX2Q99811 253 aa5.07□□□□□ -1.6
RNU6-560P-201ENST00000364007 VN1R3Q9BXE9 311 aa5.07□□□□□ -1.6
RNU6-560P-201ENST00000364007 PCED1AQ9H1Q7 454 aa5.07□□□□□ -1.6
RNU6-560P-201ENST00000364007 TOR3AQ9H497 397 aa5.07□□□□□ -1.6
RNU6-560P-201ENST00000364007 ZBTB26Q9HCK0 441 aa5.07□□□□□ -1.6
RNU6-560P-201ENST00000364007 TM7SF3Q9NS93 570 aa5.07□□□□□ -1.6
RNU6-560P-201ENST00000364007 SERTAD4Q9NUC0 356 aa5.07□□□□□ -1.6
RNU6-560P-201ENST00000364007 PACSIN3Q9UKS6 424 aa5.07□□□□□ -1.6
RNU6-560P-201ENST00000364007 MAGED2Q9UNF1 606 aaPredicted RBP5.07□□□□□ -1.6
RNU6-560P-201ENST00000364007 SLC27A6Q9Y2P4 619 aa5.07□□□□□ -1.6
RNU6-560P-201ENST00000364007 AQP12BA6NM10 295 aa5.06□□□□□ -1.6
RNU6-560P-201ENST00000364007 EXOC5O00471 708 aa5.06□□□□□ -1.6
RNU6-560P-201ENST00000364007 PIP5K1BO14986 540 aa5.06□□□□□ -1.6
RNU6-560P-201ENST00000364007 FFAR2O15552 330 aa5.06□□□□□ -1.6
RNU6-560P-201ENST00000364007 TPD52L2O43399 206 aaKnown RBP5.06□□□□□ -1.6
RNU6-560P-201ENST00000364007 EGR1P18146 543 aa5.06□□□□□ -1.6
RNU6-560P-201ENST00000364007 TRAPPC10P48553 1259 aa5.06□□□□□ -1.6
RNU6-560P-201ENST00000364007 PUM3Q15397 648 aaKnown RBP5.06□□□□□ -1.6
RNU6-560P-201ENST00000364007 CYP1B1Q16678 543 aa5.06□□□□□ -1.6
RNU6-560P-201ENST00000364007 FAM83BQ5T0W9 1011 aa5.06□□□□□ -1.6
RNU6-560P-201ENST00000364007 TEDDM1Q5T9Z0 273 aa5.06□□□□□ -1.6
RNU6-560P-201ENST00000364007 ABLIM2Q6H8Q1 611 aa5.06□□□□□ -1.6
RNU6-560P-201ENST00000364007 MYLK4Q86YV6 388 aaPredicted RBP5.06□□□□□ -1.6
RNU6-560P-201ENST00000364007 LRRC71Q8N4P6 559 aa5.06□□□□□ -1.6
RNU6-560P-201ENST00000364007 ENAHQ8N8S7 591 aaPredicted RBP5.06□□□□□ -1.6
RNU6-560P-201ENST00000364007 ZNF384Q8TF68 577 aa5.06□□□□□ -1.6
RNU6-560P-201ENST00000364007 DPCDQ9BVM2 203 aaPredicted RBP5.06□□□□□ -1.6
RNU6-560P-201ENST00000364007 INO80BQ9C086 356 aaPredicted RBP5.06□□□□□ -1.6
RNU6-560P-201ENST00000364007 ALG13Q9NP73 1137 aaKnown RBP5.06□□□□□ -1.6
RNU6-560P-201ENST00000364007 OBP2BQ9NPH6 170 aa5.06□□□□□ -1.6
RNU6-560P-201ENST00000364007 DLL3Q9NYJ7 618 aa5.06□□□□□ -1.6
RNU6-560P-201ENST00000364007 CCNL1Q9UK58 526 aaPredicted RBP5.06□□□□□ -1.6
RNU6-560P-201ENST00000364007 RIMKLBQ9ULI2 386 aa5.06□□□□□ -1.6
RNU6-560P-201ENST00000364007 ARHGEF17Q96PE2 2063 aaPredicted RBP5.05□□□□□ -1.6
RNU6-560P-201ENST00000364007 A0A087X1B8 175 aa5.05□□□□□ -1.6
RNU6-560P-201ENST00000364007 AP4M1O00189 453 aa5.05□□□□□ -1.6
RNU6-560P-201ENST00000364007 RAMP2O60895 175 aa5.05□□□□□ -1.6
RNU6-560P-201ENST00000364007 URI1O94763 535 aaPredicted RBP5.05□□□□□ -1.6
RNU6-560P-201ENST00000364007 NXPH3O95157 252 aa5.05□□□□□ -1.6
RNU6-560P-201ENST00000364007 TTLL1O95922 423 aa5.05□□□□□ -1.6
RNU6-560P-201ENST00000364007 SLPIP03973 132 aa5.05□□□□□ -1.6
RNU6-560P-201ENST00000364007 IDEP14735 1019 aa5.05□□□□□ -1.6
RNU6-560P-201ENST00000364007 TYRP1P17643 537 aa5.05□□□□□ -1.6
RNU6-560P-201ENST00000364007 ENGP17813 658 aa5.05□□□□□ -1.6
RNU6-560P-201ENST00000364007 MST1P26927 711 aa5.05□□□□□ -1.6
RNU6-560P-201ENST00000364007 CTGFP29279 349 aa5.05□□□□□ -1.6
RNU6-560P-201ENST00000364007 PDIA3P30101 505 aaKnown RBP5.05□□□□□ -1.6
RNU6-560P-201ENST00000364007 CYP2C18P33260 490 aa5.05□□□□□ -1.6
RNU6-560P-201ENST00000364007 RARRES1P49788 294 aa5.05□□□□□ -1.6
RNU6-560P-201ENST00000364007 ELF2Q15723 593 aa5.05□□□□□ -1.6
RNU6-560P-201ENST00000364007 MAPKAPK3Q16644 382 aa5.05□□□□□ -1.6
RNU6-560P-201ENST00000364007 PGBD2Q6P3X8 592 aa5.05□□□□□ -1.6
RNU6-560P-201ENST00000364007 MZT2AQ6P582 158 aa5.05□□□□□ -1.6
RNU6-560P-201ENST00000364007 CCDC174Q6PII3 467 aa5.05□□□□□ -1.6
RNU6-560P-201ENST00000364007 USP17L6PQ6QN14 398 aa5.05□□□□□ -1.6
RNU6-560P-201ENST00000364007 ZNF551Q7Z340 670 aaPredicted RBP5.05□□□□□ -1.6
RNU6-560P-201ENST00000364007 MRGPRGQ86SM5 289 aa5.05□□□□□ -1.6
RNU6-560P-201ENST00000364007 AMER2Q8N7J2 671 aa5.05□□□□□ -1.6
RNU6-560P-201ENST00000364007 CTHRC1Q96CG8 243 aa5.05□□□□□ -1.6
RNU6-560P-201ENST00000364007 PRR25Q96S07 402 aa5.05□□□□□ -1.6
RNU6-560P-201ENST00000364007 NECTIN3Q9NQS3 549 aa5.05□□□□□ -1.6
RNU6-560P-201ENST00000364007 IL17RBQ9NRM6 502 aa5.05□□□□□ -1.6
RNU6-560P-201ENST00000364007 TMOD4Q9NZQ9 345 aa5.05□□□□□ -1.6
RNU6-560P-201ENST00000364007 LPAR3Q9UBY5 353 aa5.05□□□□□ -1.6
RNU6-560P-201ENST00000364007 SCAF8Q9UPN6 1271 aaKnown RBP5.05□□□□□ -1.6
RNU6-560P-201ENST00000364007 SH2B3Q9UQQ2 575 aa5.05□□□□□ -1.6
RNU6-560P-201ENST00000364007 GOLGA6L3A6NEY3 463 aa5.04□□□□□ -1.6
RNU6-560P-201ENST00000364007 LGALS16A8MUM7 142 aa5.04□□□□□ -1.6
RNU6-560P-201ENST00000364007 H0YIZ8 118 aa5.04□□□□□ -1.6
RNU6-560P-201ENST00000364007 CYR61O00622 381 aa5.04□□□□□ -1.6
RNU6-560P-201ENST00000364007 NPC1O15118 1278 aa5.04□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms