RNA–Protein interactions for RNA: ENST00000361901.6

CALD1-202, Transcript of caldesmon 1, humanhuman

TSL 1 (best) BASIC

Gene CALD1, Length 4,114 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-202ENST00000361901 MTG1Q9BT17 334 aaPredicted RBP9.58□□□□□ -0.88
CALD1-202ENST00000361901 FZD8Q9H461 694 aa9.58□□□□□ -0.88
CALD1-202ENST00000361901 C10orf88Q9H8K7 445 aa9.58□□□□□ -0.88
CALD1-202ENST00000361901 FLRT1Q9NZU1 646 aa9.58□□□□□ -0.88
CALD1-202ENST00000361901 FAM153AQ9UHL3 310 aa9.58□□□□□ -0.88
CALD1-202ENST00000361901 NR2E1Q9Y466 385 aa9.58□□□□□ -0.88
CALD1-202ENST00000361901 EVPLQ92817 2033 aa9.58□□□□□ -0.88
CALD1-202ENST00000361901 UBTFL6P0CB48 400 aaPredicted RBP9.58□□□□□ -0.88
CALD1-202ENST00000361901 CACNB2Q08289 660 aaPredicted RBP9.58□□□□□ -0.88
CALD1-202ENST00000361901 PPP2R5EQ16537 467 aa9.58□□□□□ -0.88
CALD1-202ENST00000361901 DCAF4L1Q3SXM0 396 aa9.58□□□□□ -0.88
CALD1-202ENST00000361901 DARS2Q6PI48 645 aaKnown RBP9.58□□□□□ -0.88
CALD1-202ENST00000361901 RNF180Q86T96 592 aa9.58□□□□□ -0.88
CALD1-202ENST00000361901 JAMLQ86YT9 394 aa9.58□□□□□ -0.88
CALD1-202ENST00000361901 TSEN2Q8NCE0 465 aaKnown RBP9.58□□□□□ -0.88
CALD1-202ENST00000361901 RNF39Q9H2S5 420 aa9.58□□□□□ -0.88
CALD1-202ENST00000361901 DHX35Q9H5Z1 703 aaKnown RBP9.58□□□□□ -0.88
CALD1-202ENST00000361901 EBF2Q9HAK2 575 aa9.58□□□□□ -0.88
CALD1-202ENST00000361901 IFT122Q9HBG6 1241 aa9.58□□□□□ -0.88
CALD1-202ENST00000361901 NOCTQ9UK39 431 aaKnown RBP9.58□□□□□ -0.88
CALD1-202ENST00000361901 LRFN2Q9ULH4 789 aa9.58□□□□□ -0.88
CALD1-202ENST00000361901 UBQLN1Q9UMX0 589 aaKnown RBP9.58□□□□□ -0.88
CALD1-202ENST00000361901 MCM3APO60318 1980 aa9.58□□□□□ -0.88
CALD1-202ENST00000361901 A0A0A6YYK5 440 aaPredicted RBP9.58□□□□□ -0.88
CALD1-202ENST00000361901 POC1B-GALNT4F8VUJ3 575 aa9.58□□□□□ -0.88
CALD1-202ENST00000361901 KRT38O76015 456 aa9.58□□□□□ -0.88
CALD1-202ENST00000361901 ZCCHC18P0CG32 403 aa9.58□□□□□ -0.88
CALD1-202ENST00000361901 FBXO47Q5MNV8 452 aa9.58□□□□□ -0.88
CALD1-202ENST00000361901 CASC4Q6P4E1 433 aa9.58□□□□□ -0.88
CALD1-202ENST00000361901 PRUNE1Q86TP1 453 aa9.58□□□□□ -0.88
CALD1-202ENST00000361901 SPATA24Q86W54 205 aa9.58□□□□□ -0.88
CALD1-202ENST00000361901 CD99L2Q8TCZ2 262 aa9.58□□□□□ -0.88
CALD1-202ENST00000361901 LRRC8CQ8TDW0 803 aa9.58□□□□□ -0.88
CALD1-202ENST00000361901 TFAP2BQ92481 460 aa9.58□□□□□ -0.88
CALD1-202ENST00000361901 ZNF560Q96MR9 790 aa9.58□□□□□ -0.88
CALD1-202ENST00000361901 GPR88Q9GZN0 384 aa9.58□□□□□ -0.88
CALD1-202ENST00000361901 ASB7Q9H672 318 aa9.58□□□□□ -0.88
CALD1-202ENST00000361901 SAE1Q9UBE0 346 aaPredicted RBP9.58□□□□□ -0.88
CALD1-202ENST00000361901 MORF4L1Q9UBU8 362 aa9.58□□□□□ -0.88
CALD1-202ENST00000361901 IKBKGQ9Y6K9 419 aa9.58□□□□□ -0.88
CALD1-202ENST00000361901 IGKV6D-21A0A0A0MT36 114 aa9.57□□□□□ -0.88
CALD1-202ENST00000361901 TAF6P49848 677 aa9.57□□□□□ -0.88
CALD1-202ENST00000361901 CDC42EP1Q00587 391 aa9.57□□□□□ -0.88
CALD1-202ENST00000361901 MYBPC3Q14896 1274 aa9.57□□□□□ -0.88
CALD1-202ENST00000361901 SNX17Q15036 470 aa9.57□□□□□ -0.88
CALD1-202ENST00000361901 ZNF410Q86VK4 478 aa9.57□□□□□ -0.88
CALD1-202ENST00000361901 METTL23Q86XA0 190 aa9.57□□□□□ -0.88
CALD1-202ENST00000361901 NDEL1Q9GZM8 345 aa9.57□□□□□ -0.88
CALD1-202ENST00000361901 ISCUQ9H1K1 167 aa9.57□□□□□ -0.88
CALD1-202ENST00000361901 DMAP1Q9NPF5 467 aaPredicted RBP9.57□□□□□ -0.88
CALD1-202ENST00000361901 HMGXB4Q9UGU5 601 aa9.57□□□□□ -0.88
CALD1-202ENST00000361901 ZNF180Q9UJW8 692 aa9.57□□□□□ -0.88
CALD1-202ENST00000361901 CYB561D2O14569 222 aa9.57□□□□□ -0.88
CALD1-202ENST00000361901 TJP3O95049 919 aa9.57□□□□□ -0.88
CALD1-202ENST00000361901 HOXC6P09630 235 aa9.57□□□□□ -0.88
CALD1-202ENST00000361901 CCDC130P13994 396 aa9.57□□□□□ -0.88
CALD1-202ENST00000361901 CD52P31358 61 aa9.57□□□□□ -0.88
CALD1-202ENST00000361901 RFC1P35251 1148 aaPredicted RBP9.57□□□□□ -0.88
CALD1-202ENST00000361901 CLUL1Q15846 466 aa9.57□□□□□ -0.88
CALD1-202ENST00000361901 ANKRD42Q8N9B4 389 aa9.57□□□□□ -0.88
CALD1-202ENST00000361901 GRK7Q8WTQ7 553 aa9.57□□□□□ -0.88
CALD1-202ENST00000361901 RAPGEF5Q92565 580 aa9.57□□□□□ -0.88
CALD1-202ENST00000361901 CAPNS2Q96L46 248 aa9.57□□□□□ -0.88
CALD1-202ENST00000361901 CCDC77Q9BR77 488 aa9.57□□□□□ -0.88
CALD1-202ENST00000361901 DRC3Q9H069 523 aa9.57□□□□□ -0.88
CALD1-202ENST00000361901 PFDN4Q9NQP4 134 aa9.57□□□□□ -0.88
CALD1-202ENST00000361901 ASNSD1Q9NWL6 643 aa9.57□□□□□ -0.88
CALD1-202ENST00000361901 WDR35Q9P2L0 1181 aa9.57□□□□□ -0.88
CALD1-202ENST00000361901 STOML1Q9UBI4 398 aa9.57□□□□□ -0.88
CALD1-202ENST00000361901 TJP2Q9UDY2 1190 aa9.57□□□□□ -0.88
CALD1-202ENST00000361901 ST3GAL5Q9UNP4 418 aa9.57□□□□□ -0.88
CALD1-202ENST00000361901 R3HDM2Q9Y2K5 976 aaKnown RBP9.57□□□□□ -0.88
CALD1-202ENST00000361901 COQ4Q9Y3A0 265 aa9.57□□□□□ -0.88
CALD1-202ENST00000361901 TCRBV7S2A1N4TA0A589 114 aa9.57□□□□□ -0.88
CALD1-202ENST00000361901 PPEF2O14830 753 aa9.57□□□□□ -0.88
CALD1-202ENST00000361901 RGS16O15492 202 aaPredicted RBP9.57□□□□□ -0.88
CALD1-202ENST00000361901 MICAL2O94851 1124 aa9.57□□□□□ -0.88
CALD1-202ENST00000361901 ASGR1P07306 291 aa9.57□□□□□ -0.88
CALD1-202ENST00000361901 CHRNA3P32297 505 aa9.57□□□□□ -0.88
CALD1-202ENST00000361901 CACNA2D1P54289 1103 aa9.57□□□□□ -0.88
CALD1-202ENST00000361901 KCNJ2P63252 427 aa9.57□□□□□ -0.88
CALD1-202ENST00000361901 NOMO3P69849 1222 aa9.57□□□□□ -0.88
CALD1-202ENST00000361901 MOGSQ13724 837 aa9.57□□□□□ -0.88
CALD1-202ENST00000361901 USP6NLQ92738 828 aa9.57□□□□□ -0.88
CALD1-202ENST00000361901 PRRC2BQ5JSZ5 2229 aaKnown RBP9.56□□□□□ -0.88
CALD1-202ENST00000361901 PHIPQ8WWQ0 1821 aa9.56□□□□□ -0.88
CALD1-202ENST00000361901 PCNTO95613 3336 aa9.56□□□□□ -0.88
CALD1-202ENST00000361901 CST8O60676 142 aa9.56□□□□□ -0.88
CALD1-202ENST00000361901 PROSCO94903 275 aa9.56□□□□□ -0.88
CALD1-202ENST00000361901 DARSP14868 501 aaKnown RBP9.56□□□□□ -0.88
CALD1-202ENST00000361901 HSPA6P17066 643 aa9.56□□□□□ -0.88
CALD1-202ENST00000361901 NAT1P18440 290 aa9.56□□□□□ -0.88
CALD1-202ENST00000361901 OR1G1P47890 313 aa9.56□□□□□ -0.88
CALD1-202ENST00000361901 SCNN1GP51170 649 aa9.56□□□□□ -0.88
CALD1-202ENST00000361901 GPS1Q13098 491 aa9.56□□□□□ -0.88
CALD1-202ENST00000361901 KYAT1Q16773 422 aa9.56□□□□□ -0.88
CALD1-202ENST00000361901 ZNF662Q6ZS27 426 aa9.56□□□□□ -0.88
CALD1-202ENST00000361901 LRRN4Q8WUT4 740 aa9.56□□□□□ -0.88
CALD1-202ENST00000361901 GGA2Q9UJY4 613 aa9.56□□□□□ -0.88
CALD1-202ENST00000361901 RABL2BQ9UNT1 228 aa9.56□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms