RNA–Protein interactions for RNA: ENST00000361866.7

COL6A1-201, Transcript of collagen type VI alpha 1 chain, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene COL6A1, Length 4,238 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-201ENST00000361866 B4GALNT2Q8NHY0 566 aa14.41□□□□□ -0.1
COL6A1-201ENST00000361866 CGRRF1Q99675 332 aa14.41□□□□□ -0.1
COL6A1-201ENST00000361866 NMUR2Q9GZQ4 415 aa14.41□□□□□ -0.1
COL6A1-201ENST00000361866 CCDC90BQ9GZT6 254 aa14.41□□□□□ -0.1
COL6A1-201ENST00000361866 CLIC5Q9NZA1 410 aa14.41□□□□□ -0.1
COL6A1-201ENST00000361866 POLIQ9UNA4 740 aa14.41□□□□□ -0.1
COL6A1-201ENST00000361866 SLC12A4Q9UP95 1085 aa14.41□□□□□ -0.1
COL6A1-201ENST00000361866 OGTO15294 1046 aa14.41□□□□□ -0.1
COL6A1-201ENST00000361866 MMRN1Q13201 1228 aa14.41□□□□□ -0.1
COL6A1-201ENST00000361866 C4orf50Q6ZRC1 276 aa14.41□□□□□ -0.1
COL6A1-201ENST00000361866 MKL1Q969V6 931 aa14.41□□□□□ -0.1
COL6A1-201ENST00000361866 DRC3Q9H069 523 aa14.41□□□□□ -0.1
COL6A1-201ENST00000361866 POLBP06746 335 aa14.4□□□□□ -0.1
COL6A1-201ENST00000361866 RALBP11234 206 aa14.4□□□□□ -0.1
COL6A1-201ENST00000361866 TFE3P19532 575 aaPredicted RBP14.4□□□□□ -0.1
COL6A1-201ENST00000361866 RBL1P28749 1068 aa14.4□□□□□ -0.1
COL6A1-201ENST00000361866 PMLP29590 882 aa14.4□□□□□ -0.1
COL6A1-201ENST00000361866 AVPR1AP37288 418 aa14.4□□□□□ -0.1
COL6A1-201ENST00000361866 TBL3Q12788 808 aaKnown RBP14.4□□□□□ -0.1
COL6A1-201ENST00000361866 PGM5Q15124 567 aa14.4□□□□□ -0.1
COL6A1-201ENST00000361866 BOLA3Q53S33 107 aa14.4□□□□□ -0.1
COL6A1-201ENST00000361866 DSTYKQ6XUX3 929 aa14.4□□□□□ -0.1
COL6A1-201ENST00000361866 RAB44Q7Z6P3 723 aaPredicted RBP14.4□□□□□ -0.1
COL6A1-201ENST00000361866 NUP93Q8N1F7 819 aa14.4□□□□□ -0.1
COL6A1-201ENST00000361866 ACTL7BQ9Y614 415 aa14.4□□□□□ -0.1
COL6A1-201ENST00000361866 HUS1O60921 280 aa14.4□□□□□ -0.1
COL6A1-201ENST00000361866 GSTT1P30711 240 aa14.4□□□□□ -0.1
COL6A1-201ENST00000361866 SPRP35270 261 aaPredicted RBP14.4□□□□□ -0.1
COL6A1-201ENST00000361866 KPNA2P52292 529 aaKnown RBP14.4□□□□□ -0.1
COL6A1-201ENST00000361866 YWHAHQ04917 246 aaPredicted RBP14.4□□□□□ -0.1
COL6A1-201ENST00000361866 DGKZQ13574 1117 aa14.4□□□□□ -0.1
COL6A1-201ENST00000361866 DPYSL3Q14195 570 aa14.4□□□□□ -0.1
COL6A1-201ENST00000361866 GOLGA7BQ2TAP0 167 aa14.4□□□□□ -0.1
COL6A1-201ENST00000361866 ARL13BQ3SXY8 428 aa14.4□□□□□ -0.1
COL6A1-201ENST00000361866 TDRD10Q5VZ19 366 aaKnown RBP14.4□□□□□ -0.1
COL6A1-201ENST00000361866 GRAMD4Q6IC98 578 aa14.4□□□□□ -0.1
COL6A1-201ENST00000361866 NETO2Q8NC67 525 aa14.4□□□□□ -0.1
COL6A1-201ENST00000361866 MAGEC3Q8TD91 643 aa14.4□□□□□ -0.1
COL6A1-201ENST00000361866 STAP1Q9ULZ2 295 aa14.4□□□□□ -0.1
COL6A1-201ENST00000361866 CDY2AQ9Y6F7 541 aa14.4□□□□□ -0.1
COL6A1-201ENST00000361866 CDY1Q9Y6F8 540 aa14.4□□□□□ -0.1
COL6A1-201ENST00000361866 C2CD2LO14523 706 aa14.4□□□□□ -0.1
COL6A1-201ENST00000361866 CXCL8P10145 99 aa14.4□□□□□ -0.1
COL6A1-201ENST00000361866 TM4SF1P30408 202 aa14.4□□□□□ -0.1
COL6A1-201ENST00000361866 HOXD13P35453 343 aa14.4□□□□□ -0.1
COL6A1-201ENST00000361866 CLK2P49760 499 aaKnown RBP14.4□□□□□ -0.1
COL6A1-201ENST00000361866 TMEM132DQ14C87 1099 aa14.4□□□□□ -0.1
COL6A1-201ENST00000361866 C15orf59Q2T9L4 293 aaPredicted RBP14.4□□□□□ -0.1
COL6A1-201ENST00000361866 RIPOR1Q6ZS17 1223 aa14.4□□□□□ -0.1
COL6A1-201ENST00000361866 GDPD5Q8WTR4 605 aa14.4□□□□□ -0.1
COL6A1-201ENST00000361866 LRMDAQ9H2I8 198 aa14.4□□□□□ -0.1
COL6A1-201ENST00000361866 KRT82Q9NSB4 513 aa14.4□□□□□ -0.1
COL6A1-201ENST00000361866 UBP1Q9NZI7 540 aa14.4□□□□□ -0.1
COL6A1-201ENST00000361866 ROBO3Q96MS0 1386 aa14.4□□□□□ -0.1
COL6A1-201ENST00000361866 GOLGA8TH3BQL2 631 aa14.39□□□□□ -0.11
COL6A1-201ENST00000361866 SMAPO00193 183 aa14.39□□□□□ -0.11
COL6A1-201ENST00000361866 XPOTO43592 962 aaKnown RBP14.39□□□□□ -0.11
COL6A1-201ENST00000361866 ZFXP17010 805 aaPredicted RBP14.39□□□□□ -0.11
COL6A1-201ENST00000361866 CHRNB2P17787 502 aa14.39□□□□□ -0.11
COL6A1-201ENST00000361866 NOMO3P69849 1222 aa14.39□□□□□ -0.11
COL6A1-201ENST00000361866 UBAP2LQ14157 1087 aaKnown RBP14.39□□□□□ -0.11
COL6A1-201ENST00000361866 TTC7BQ86TV6 843 aa14.39□□□□□ -0.11
COL6A1-201ENST00000361866 DDIASQ8IXT1 998 aa14.39□□□□□ -0.11
COL6A1-201ENST00000361866 ALLCQ8N6M5 410 aa14.39□□□□□ -0.11
COL6A1-201ENST00000361866 HAUS8Q9BT25 410 aa14.39□□□□□ -0.11
COL6A1-201ENST00000361866 KLHL4Q9C0H6 718 aa14.39□□□□□ -0.11
COL6A1-201ENST00000361866 PXMP2Q9NR77 195 aa14.39□□□□□ -0.11
COL6A1-201ENST00000361866 RNF19AQ9NV58 838 aa14.39□□□□□ -0.11
COL6A1-201ENST00000361866 TBC1D12O60347 775 aa14.39□□□□□ -0.11
COL6A1-201ENST00000361866 USP12O75317 370 aa14.39□□□□□ -0.11
COL6A1-201ENST00000361866 FAM155BO75949 473 aa14.39□□□□□ -0.11
COL6A1-201ENST00000361866 RAG1P15918 1043 aa14.39□□□□□ -0.11
COL6A1-201ENST00000361866 ECHS1P30084 290 aa14.39□□□□□ -0.11
COL6A1-201ENST00000361866 MSX2P35548 267 aaPredicted RBP14.39□□□□□ -0.11
COL6A1-201ENST00000361866 SULT1E1P49888 294 aa14.39□□□□□ -0.11
COL6A1-201ENST00000361866 UBAP2Q5T6F2 1119 aaKnown RBP14.39□□□□□ -0.11
COL6A1-201ENST00000361866 PDPK2PQ6A1A2 396 aa14.39□□□□□ -0.11
COL6A1-201ENST00000361866 UNC45BQ8IWX7 931 aa14.39□□□□□ -0.11
COL6A1-201ENST00000361866 ANKRD27Q96NW4 1050 aa14.39□□□□□ -0.11
COL6A1-201ENST00000361866 MRPL1Q9BYD6 325 aaKnown RBP14.39□□□□□ -0.11
COL6A1-201ENST00000361866 MAN1C1Q9NR34 630 aa14.39□□□□□ -0.11
COL6A1-201ENST00000361866 MRPL42Q9Y6G3 142 aaKnown RBP14.39□□□□□ -0.11
COL6A1-201ENST00000361866 BAZ2AQ9UIF9 1905 aaKnown RBP14.39□□□□□ -0.11
COL6A1-201ENST00000361866 A0A0B4J269 797 aa14.39□□□□□ -0.11
COL6A1-201ENST00000361866 PEX1O43933 1283 aa14.39□□□□□ -0.11
COL6A1-201ENST00000361866 DSG3P32926 999 aa14.39□□□□□ -0.11
COL6A1-201ENST00000361866 TCF7P36402 384 aaPredicted RBP14.39□□□□□ -0.11
COL6A1-201ENST00000361866 R3HDM1Q15032 1099 aaKnown RBP14.39□□□□□ -0.11
COL6A1-201ENST00000361866 RFWD3Q6PCD5 774 aa14.39□□□□□ -0.11
COL6A1-201ENST00000361866 POTEAQ6S8J7 498 aa14.39□□□□□ -0.11
COL6A1-201ENST00000361866 SAMD7Q7Z3H4 446 aa14.39□□□□□ -0.11
COL6A1-201ENST00000361866 EXOC8Q8IYI6 725 aa14.39□□□□□ -0.11
COL6A1-201ENST00000361866 MYH15Q9Y2K3 1946 aa14.39□□□□□ -0.11
COL6A1-201ENST00000361866 DFFAO00273 331 aa14.39□□□□□ -0.11
COL6A1-201ENST00000361866 GSC2O15499 205 aa14.39□□□□□ -0.11
COL6A1-201ENST00000361866 TXNP10599 105 aaKnown RBP14.39□□□□□ -0.11
COL6A1-201ENST00000361866 TNFAIP2Q03169 654 aa14.39□□□□□ -0.11
COL6A1-201ENST00000361866 PTPN11Q06124 597 aaPredicted RBP14.39□□□□□ -0.11
COL6A1-201ENST00000361866 WLSQ5T9L3 541 aa14.39□□□□□ -0.11
COL6A1-201ENST00000361866 USP6NLQ92738 828 aa14.39□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms