RNA–Protein interactions for RNA: ENST00000361115.4

CCL28-201, Transcript of C-C motif chemokine ligand 28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCL28, Length 3,126 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL28-201ENST00000361115 ZBP1Q9H171 429 aa8.1□□□□□ -1.11
CCL28-201ENST00000361115 CPVLQ9H3G5 476 aa8.1□□□□□ -1.11
CCL28-201ENST00000361115 SLC9A2Q9UBY0 812 aa8.1□□□□□ -1.11
CCL28-201ENST00000361115 ARMCX3Q9UH62 379 aaPredicted RBP8.1□□□□□ -1.11
CCL28-201ENST00000361115 ESYT2A0FGR8 921 aa8.09□□□□□ -1.11
CCL28-201ENST00000361115 CBX6O95503 412 aa8.09□□□□□ -1.11
CCL28-201ENST00000361115 ACSL3O95573 720 aa8.09□□□□□ -1.11
CCL28-201ENST00000361115 CACNA2D1P54289 1103 aa8.09□□□□□ -1.11
CCL28-201ENST00000361115 DHX34Q14147 1143 aaKnown RBP8.09□□□□□ -1.11
CCL28-201ENST00000361115 INTS8Q75QN2 995 aaKnown RBP8.09□□□□□ -1.11
CCL28-201ENST00000361115 THNSL1Q8IYQ7 743 aa8.09□□□□□ -1.11
CCL28-201ENST00000361115 CYP4X1Q8N118 509 aa8.09□□□□□ -1.11
CCL28-201ENST00000361115 OLIG1Q8TAK6 271 aa8.09□□□□□ -1.11
CCL28-201ENST00000361115 LNX1Q8TBB1 728 aaPredicted RBP8.09□□□□□ -1.11
CCL28-201ENST00000361115 SLC35G2Q8TBE7 412 aa8.09□□□□□ -1.11
CCL28-201ENST00000361115 RAD54LQ92698 747 aa8.09□□□□□ -1.11
CCL28-201ENST00000361115 JPH1Q9HDC5 661 aaPredicted RBP8.09□□□□□ -1.11
CCL28-201ENST00000361115 FNIP2Q9P278 1114 aa8.09□□□□□ -1.11
CCL28-201ENST00000361115 SCOCQ9UIL1 159 aa8.09□□□□□ -1.11
CCL28-201ENST00000361115 RABL2BQ9UNT1 228 aa8.09□□□□□ -1.11
CCL28-201ENST00000361115 TET1Q8NFU7 2136 aa8.09□□□□□ -1.11
CCL28-201ENST00000361115 A0A0A6YYK5 440 aaPredicted RBP8.09□□□□□ -1.11
CCL28-201ENST00000361115 POTEMA6NI47 508 aa8.09□□□□□ -1.11
CCL28-201ENST00000361115 LILRB5O75023 590 aa8.09□□□□□ -1.11
CCL28-201ENST00000361115 CLASP2O75122 1294 aaKnown RBP8.09□□□□□ -1.11
CCL28-201ENST00000361115 ZNF623O75123 536 aa8.09□□□□□ -1.11
CCL28-201ENST00000361115 CYP1A1P04798 512 aaPredicted RBP8.09□□□□□ -1.11
CCL28-201ENST00000361115 HNRNPA1P09651 372 aaKnown RBP eCLIP8.09□□□□□ -1.11
CCL28-201ENST00000361115 RARGP13631 454 aa8.09□□□□□ -1.11
CCL28-201ENST00000361115 BRAFP15056 766 aa8.09□□□□□ -1.11
CCL28-201ENST00000361115 ZNF16P17020 682 aaPredicted RBP8.09□□□□□ -1.11
CCL28-201ENST00000361115 AXLP30530 894 aa8.09□□□□□ -1.11
CCL28-201ENST00000361115 TCF7P36402 384 aaPredicted RBP8.09□□□□□ -1.11
CCL28-201ENST00000361115 SERPINB4P48594 390 aa8.09□□□□□ -1.11
CCL28-201ENST00000361115 STARD6P59095 220 aa8.09□□□□□ -1.11
CCL28-201ENST00000361115 ECM1Q16610 540 aa8.09□□□□□ -1.11
CCL28-201ENST00000361115 USH1GQ495M9 461 aa8.09□□□□□ -1.11
CCL28-201ENST00000361115 KHDC1Q4VXA5 237 aaKnown RBP8.09□□□□□ -1.11
CCL28-201ENST00000361115 WASHC2DQ5SRD0 308 aa8.09□□□□□ -1.11
CCL28-201ENST00000361115 SYCE2Q6PIF2 218 aa8.09□□□□□ -1.11
CCL28-201ENST00000361115 CROCCP2Q86T23 111 aa8.09□□□□□ -1.11
CCL28-201ENST00000361115 PRELID2Q8N945 189 aa8.09□□□□□ -1.11
CCL28-201ENST00000361115 NETO1Q8TDF5 533 aa8.09□□□□□ -1.11
CCL28-201ENST00000361115 LINC01599Q8WXQ3 324 aa8.09□□□□□ -1.11
CCL28-201ENST00000361115 DNAJC19Q96DA6 116 aa8.09□□□□□ -1.11
CCL28-201ENST00000361115 NAP1L3Q99457 506 aaPredicted RBP8.09□□□□□ -1.11
CCL28-201ENST00000361115 TRPV5Q9NQA5 729 aa8.09□□□□□ -1.11
CCL28-201ENST00000361115 METTL5Q9NRN9 209 aaKnown RBP8.09□□□□□ -1.11
CCL28-201ENST00000361115 MTRF1LQ9UGC7 380 aaKnown RBP8.09□□□□□ -1.11
CCL28-201ENST00000361115 PADI3Q9ULW8 664 aa8.09□□□□□ -1.11
CCL28-201ENST00000361115 USP20Q9Y2K6 914 aa8.09□□□□□ -1.11
CCL28-201ENST00000361115 ZSCAN9O15535 394 aaPredicted RBP8.09□□□□□ -1.11
CCL28-201ENST00000361115 AKAP3O75969 853 aa8.09□□□□□ -1.11
CCL28-201ENST00000361115 GSTT1P30711 240 aa8.09□□□□□ -1.11
CCL28-201ENST00000361115 SFNP31947 248 aa8.09□□□□□ -1.11
CCL28-201ENST00000361115 STX2P32856 288 aa8.09□□□□□ -1.11
CCL28-201ENST00000361115 CACNB1Q02641 598 aaPredicted RBP8.09□□□□□ -1.11
CCL28-201ENST00000361115 DYNC1I2Q13409 638 aaKnown RBP8.09□□□□□ -1.11
CCL28-201ENST00000361115 PDAP1Q13442 181 aaKnown RBP8.09□□□□□ -1.11
CCL28-201ENST00000361115 CAMK2BQ13554 666 aa8.09□□□□□ -1.11
CCL28-201ENST00000361115 ZNF568Q3ZCX4 644 aa8.09□□□□□ -1.11
CCL28-201ENST00000361115 PABPC1LQ4VXU2 614 aaKnown RBP8.09□□□□□ -1.11
CCL28-201ENST00000361115 DNASE1L2Q92874 299 aa8.09□□□□□ -1.11
CCL28-201ENST00000361115 ARHGEF26Q96DR7 871 aa8.09□□□□□ -1.11
CCL28-201ENST00000361115 MAGEB18Q96M61 343 aa8.09□□□□□ -1.11
CCL28-201ENST00000361115 CEP63Q96MT8 703 aa8.09□□□□□ -1.11
CCL28-201ENST00000361115 NDNQ99608 321 aa8.09□□□□□ -1.11
CCL28-201ENST00000361115 NAP1L4Q99733 375 aaKnown RBP8.09□□□□□ -1.11
CCL28-201ENST00000361115 CDC42EP4Q9H3Q1 356 aaKnown RBP8.09□□□□□ -1.11
CCL28-201ENST00000361115 BARHL2Q9NY43 387 aa8.09□□□□□ -1.11
CCL28-201ENST00000361115 STK17AQ9UEE5 414 aa8.09□□□□□ -1.11
CCL28-201ENST00000361115 MRPS17Q9Y2R5 130 aaKnown RBP8.09□□□□□ -1.11
CCL28-201ENST00000361115 GSTTP1A0A1W2PQM5 241 aa8.08□□□□□ -1.12
CCL28-201ENST00000361115 DENND3A2RUS2 1198 aa8.08□□□□□ -1.12
CCL28-201ENST00000361115 PHF2O75151 1096 aa8.08□□□□□ -1.12
CCL28-201ENST00000361115 MYCLP12524 364 aaPredicted RBP8.08□□□□□ -1.12
CCL28-201ENST00000361115 ABCB4P21439 1286 aa8.08□□□□□ -1.12
CCL28-201ENST00000361115 PON1P27169 355 aa8.08□□□□□ -1.12
CCL28-201ENST00000361115 VHLP40337 213 aa8.08□□□□□ -1.12
CCL28-201ENST00000361115 PRKCIP41743 596 aa8.08□□□□□ -1.12
CCL28-201ENST00000361115 MARCKSL1P49006 195 aa8.08□□□□□ -1.12
CCL28-201ENST00000361115 VCPP55072 806 aaKnown RBP8.08□□□□□ -1.12
CCL28-201ENST00000361115 NPEPPSP55786 919 aa8.08□□□□□ -1.12
CCL28-201ENST00000361115 MARSP56192 900 aaKnown RBP8.08□□□□□ -1.12
CCL28-201ENST00000361115 MYBPC3Q14896 1274 aa8.08□□□□□ -1.12
CCL28-201ENST00000361115 EXOC3L4Q17RC7 722 aa8.08□□□□□ -1.12
CCL28-201ENST00000361115 FAM26FQ5R3K3 315 aa8.08□□□□□ -1.12
CCL28-201ENST00000361115 MARCH8Q5T0T0 291 aa8.08□□□□□ -1.12
CCL28-201ENST00000361115 CCDC149Q6ZUS6 474 aa8.08□□□□□ -1.12
CCL28-201ENST00000361115 ZC3H18Q86VM9 953 aaKnown RBP8.08□□□□□ -1.12
CCL28-201ENST00000361115 MYLK4Q86YV6 388 aaPredicted RBP8.08□□□□□ -1.12
CCL28-201ENST00000361115 SYCP3Q8IZU3 236 aa8.08□□□□□ -1.12
CCL28-201ENST00000361115 LINC01465Q8N7H1 131 aa8.08□□□□□ -1.12
CCL28-201ENST00000361115 LRRC8CQ8TDW0 803 aa8.08□□□□□ -1.12
CCL28-201ENST00000361115 SCG3Q8WXD2 468 aaKnown RBP8.08□□□□□ -1.12
CCL28-201ENST00000361115 INPP5DQ92835 1189 aa8.08□□□□□ -1.12
CCL28-201ENST00000361115 AZIN2Q96A70 460 aa8.08□□□□□ -1.12
CCL28-201ENST00000361115 CDK5RAP3Q96JB5 506 aa8.08□□□□□ -1.12
CCL28-201ENST00000361115 LOXL4Q96JB6 756 aa8.08□□□□□ -1.12
CCL28-201ENST00000361115 DDX50Q9BQ39 737 aaKnown RBP8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms