RNA–Protein interactions for RNA: ENST00000360238.6

CUEDC1-201, Transcript of CUE domain containing 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CUEDC1, Length 2,193 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1-201ENST00000360238 SLC4A5Q9BY07 1137 aa27.52■■■□□ 2
CUEDC1-201ENST00000360238 SLC45A1Q9Y2W3 748 aa27.52■■■□□ 2
CUEDC1-201ENST00000360238 PIK3R2O00459 728 aa27.51■■□□□ 1.99
CUEDC1-201ENST00000360238 TGM2P21980 687 aa27.51■■□□□ 1.99
CUEDC1-201ENST00000360238 KCNJ11Q14654 390 aa27.51■■□□□ 1.99
CUEDC1-201ENST00000360238 EFTUD2Q15029 972 aaKnown RBP eCLIP27.51■■□□□ 1.99
CUEDC1-201ENST00000360238 PPP1R26Q5T8A7 1209 aaPredicted RBP27.51■■□□□ 1.99
CUEDC1-201ENST00000360238 RMDN2Q96LZ7 410 aa27.51■■□□□ 1.99
CUEDC1-201ENST00000360238 NCAPGQ9BPX3 1015 aa27.51■■□□□ 1.99
CUEDC1-201ENST00000360238 C11orf97A0A1B0GVM6 126 aaPredicted RBP27.5■■□□□ 1.99
CUEDC1-201ENST00000360238 A0A1W2PPM1 405 aa27.5■■□□□ 1.99
CUEDC1-201ENST00000360238 CHADO15335 359 aa27.5■■□□□ 1.99
CUEDC1-201ENST00000360238 SNAI1O95863 264 aaPredicted RBP27.5■■□□□ 1.99
CUEDC1-201ENST00000360238 MMP3P08254 477 aa27.5■■□□□ 1.99
CUEDC1-201ENST00000360238 DESP17661 470 aa27.5■■□□□ 1.99
CUEDC1-201ENST00000360238 CDO1Q16878 200 aa27.5■■□□□ 1.99
CUEDC1-201ENST00000360238 RAB6CQ53S08 254 aa27.5■■□□□ 1.99
CUEDC1-201ENST00000360238 SESTD1Q86VW0 696 aa27.5■■□□□ 1.99
CUEDC1-201ENST00000360238 RTP4Q96DX8 246 aa27.5■■□□□ 1.99
CUEDC1-201ENST00000360238 MRRFQ96E11 262 aaKnown RBP27.5■■□□□ 1.99
CUEDC1-201ENST00000360238 RAB6CQ9H0N0 254 aa27.5■■□□□ 1.99
CUEDC1-201ENST00000360238 CFAP69A5D8W1 941 aa27.5■■□□□ 1.99
CUEDC1-201ENST00000360238 KRT4P19013 534 aa27.5■■□□□ 1.99
CUEDC1-201ENST00000360238 SNX16P57768 344 aa27.5■■□□□ 1.99
CUEDC1-201ENST00000360238 PMF1Q6P1K2 205 aa27.5■■□□□ 1.99
CUEDC1-201ENST00000360238 FAM47EQ6ZV65 393 aa27.5■■□□□ 1.99
CUEDC1-201ENST00000360238 TMEM110Q86TL2 294 aa27.5■■□□□ 1.99
CUEDC1-201ENST00000360238 ZC3H18Q86VM9 953 aaKnown RBP27.5■■□□□ 1.99
CUEDC1-201ENST00000360238 TTC30AQ86WT1 665 aa27.5■■□□□ 1.99
CUEDC1-201ENST00000360238 FITM2Q8N6M3 262 aa27.5■■□□□ 1.99
CUEDC1-201ENST00000360238 MZB1Q8WU39 189 aa27.5■■□□□ 1.99
CUEDC1-201ENST00000360238 SNX27Q96L92 541 aa27.5■■□□□ 1.99
CUEDC1-201ENST00000360238 ECT2Q9H8V3 914 aa27.5■■□□□ 1.99
CUEDC1-201ENST00000360238 GGT7Q9UJ14 662 aa27.5■■□□□ 1.99
CUEDC1-201ENST00000360238 GRID1Q9ULK0 1009 aa27.5■■□□□ 1.99
CUEDC1-201ENST00000360238 GRAP2O75791 330 aa27.49■■□□□ 1.99
CUEDC1-201ENST00000360238 NPTXRO95502 500 aa27.49■■□□□ 1.99
CUEDC1-201ENST00000360238 SDC4P31431 198 aa27.49■■□□□ 1.99
CUEDC1-201ENST00000360238 GBP2P32456 591 aaPredicted RBP27.49■■□□□ 1.99
CUEDC1-201ENST00000360238 RGS7P49802 495 aa27.49■■□□□ 1.99
CUEDC1-201ENST00000360238 SLC6A3Q01959 620 aa27.49■■□□□ 1.99
CUEDC1-201ENST00000360238 DNAJC3Q13217 504 aa27.49■■□□□ 1.99
CUEDC1-201ENST00000360238 DUSP28Q4G0W2 176 aa27.49■■□□□ 1.99
CUEDC1-201ENST00000360238 ZDHHC17Q8IUH5 632 aa27.49■■□□□ 1.99
CUEDC1-201ENST00000360238 TAB3Q8N5C8 712 aaPredicted RBP27.49■■□□□ 1.99
CUEDC1-201ENST00000360238 LRRC52Q8N7C0 313 aa27.49■■□□□ 1.99
CUEDC1-201ENST00000360238 MAGEC3Q8TD91 643 aa27.49■■□□□ 1.99
CUEDC1-201ENST00000360238 LRRC8CQ8TDW0 803 aa27.49■■□□□ 1.99
CUEDC1-201ENST00000360238 DCAKDQ8WVC6 231 aa27.49■■□□□ 1.99
CUEDC1-201ENST00000360238 ALKBH8Q96BT7 664 aaKnown RBP27.49■■□□□ 1.99
CUEDC1-201ENST00000360238 SLC10A4Q96EP9 437 aa27.49■■□□□ 1.99
CUEDC1-201ENST00000360238 MRPL45Q9BRJ2 306 aaKnown RBP27.49■■□□□ 1.99
CUEDC1-201ENST00000360238 PAK5Q9P286 719 aa27.49■■□□□ 1.99
CUEDC1-201ENST00000360238 PHTF1Q9UMS5 762 aa27.49■■□□□ 1.99
CUEDC1-201ENST00000360238 SPAG6O75602 509 aa27.49■■□□□ 1.99
CUEDC1-201ENST00000360238 MSH2P43246 934 aa27.49■■□□□ 1.99
CUEDC1-201ENST00000360238 MGAT5Q09328 741 aa27.49■■□□□ 1.99
CUEDC1-201ENST00000360238 SLC1A5Q15758 541 aa27.49■■□□□ 1.99
CUEDC1-201ENST00000360238 HHATQ5VTY9 493 aa27.49■■□□□ 1.99
CUEDC1-201ENST00000360238 C9orf131Q5VYM1 1079 aa27.49■■□□□ 1.99
CUEDC1-201ENST00000360238 PLD5Q8N7P1 536 aa27.49■■□□□ 1.99
CUEDC1-201ENST00000360238 STK32AQ8WU08 396 aa27.49■■□□□ 1.99
CUEDC1-201ENST00000360238 CYTH2Q99418 400 aa27.49■■□□□ 1.99
CUEDC1-201ENST00000360238 FRMD8Q9BZ67 464 aaPredicted RBP27.49■■□□□ 1.99
CUEDC1-201ENST00000360238 SNX9Q9Y5X1 595 aa27.49■■□□□ 1.99
CUEDC1-201ENST00000360238 ZNF487B1APH4 448 aa27.48■■□□□ 1.99
CUEDC1-201ENST00000360238 H7C0C1 242 aa27.48■■□□□ 1.99
CUEDC1-201ENST00000360238 PDHXO00330 501 aa27.48■■□□□ 1.99
CUEDC1-201ENST00000360238 APOL1O14791 398 aa27.48■■□□□ 1.99
CUEDC1-201ENST00000360238 MDM4O15151 490 aa27.48■■□□□ 1.99
CUEDC1-201ENST00000360238 ATP5OP48047 213 aa27.48■■□□□ 1.99
CUEDC1-201ENST00000360238 SLC27A1Q6PCB7 646 aa27.48■■□□□ 1.99
CUEDC1-201ENST00000360238 ECHDC2Q86YB7 292 aa27.48■■□□□ 1.99
CUEDC1-201ENST00000360238 FAM172AQ8WUF8 416 aa27.48■■□□□ 1.99
CUEDC1-201ENST00000360238 SLC35F5Q8WV83 523 aa27.48■■□□□ 1.99
CUEDC1-201ENST00000360238 NGRNQ9NPE2 291 aaKnown RBP27.48■■□□□ 1.99
CUEDC1-201ENST00000360238 MORF4L1Q9UBU8 362 aa27.48■■□□□ 1.99
CUEDC1-201ENST00000360238 HESX1Q9UBX0 185 aa27.48■■□□□ 1.99
CUEDC1-201ENST00000360238 CHMP2BQ9UQN3 213 aa27.48■■□□□ 1.99
CUEDC1-201ENST00000360238 EDF1O60869 148 aaKnown RBP27.48■■□□□ 1.99
CUEDC1-201ENST00000360238 IL4RP24394 825 aa27.48■■□□□ 1.99
CUEDC1-201ENST00000360238 SKIV2L2P42285 1042 aaKnown RBP27.48■■□□□ 1.99
CUEDC1-201ENST00000360238 ATP11AP98196 1134 aa27.48■■□□□ 1.99
CUEDC1-201ENST00000360238 SLC9A4Q6AI14 798 aa27.48■■□□□ 1.99
CUEDC1-201ENST00000360238 ACOT1Q86TX2 421 aa27.48■■□□□ 1.99
CUEDC1-201ENST00000360238 UNC93AQ86WB7 457 aa27.48■■□□□ 1.99
CUEDC1-201ENST00000360238 USP29Q9HBJ7 922 aa27.48■■□□□ 1.99
CUEDC1-201ENST00000360238 PCDH18Q9HCL0 1135 aa27.48■■□□□ 1.99
CUEDC1-201ENST00000360238 TEX264Q9Y6I9 313 aa27.48■■□□□ 1.99
CUEDC1-201ENST00000360238 SMPD1P17405 629 aa27.47■■□□□ 1.99
CUEDC1-201ENST00000360238 ZBTB6Q15916 424 aa27.47■■□□□ 1.99
CUEDC1-201ENST00000360238 DGKDQ16760 1214 aa27.47■■□□□ 1.99
CUEDC1-201ENST00000360238 DPY19L2Q6NUT2 758 aa27.47■■□□□ 1.99
CUEDC1-201ENST00000360238 BEST2Q8NFU1 509 aa27.47■■□□□ 1.99
CUEDC1-201ENST00000360238 ZMAT2Q96NC0 199 aaKnown RBP27.47■■□□□ 1.99
CUEDC1-201ENST00000360238 ZNF670Q9BS34 389 aa27.47■■□□□ 1.99
CUEDC1-201ENST00000360238 ADAMTS10Q9H324 1103 aa27.47■■□□□ 1.99
CUEDC1-201ENST00000360238 RRN3P2A6NIE6 340 aa27.46■■□□□ 1.99
CUEDC1-201ENST00000360238 TM9SF1O15321 606 aa27.46■■□□□ 1.99
CUEDC1-201ENST00000360238 HOXA11P31270 313 aaPredicted RBP27.46■■□□□ 1.99
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms